Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G52470 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 3.5e-58 228.0 112 100.0
AT2G25312 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.3e-49 199.5 112 84.8
AT3G44428 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.3e-49 199.5 112 86.6
AT3G45285 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 3.3e-48 194.9 112 83.0
Sp2g01720 Schrenkiella parvula HOM05D008416 ORTHO05D010671 4.3e-40 167.9 107 70.1
AT3G45275 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 2.4e-38 162.2 104 73.1
Thhalv10003106m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 2.6e-37 158.7 110 67.3
CARHR150620 Cardamine hirsuta HOM05D008416 ORTHO05D010671 2.9e-36 155.2 110 66.4
BraA06t23586Z Brassica rapa HOM05D008416 ORTHO05D010671 3.1e-30 135.2 110 52.7
C06p04270 Brassica napus HOM05D008416 ORTHO05D010671 6.9e-30 134.0 109 52.3
BolC6t35556H Brassica oleracea HOM05D008416 ORTHO05D010671 6.9e-30 134.0 109 52.3
BolC6t35553H Brassica oleracea HOM05D008416 ORTHO05D010671 1.2e-29 133.3 109 51.4
BolC6t35554H Brassica oleracea HOM05D008416 ORTHO05D010671 1.2e-29 133.3 109 51.4
C06p04280 Brassica napus HOM05D008416 ORTHO05D010671 2.0e-29 132.5 109 51.4
BolC6t35559H Brassica oleracea HOM05D008416 ORTHO05D010671 2.0e-29 132.5 109 51.4
BolC6t35555H Brassica oleracea HOM05D008416 ORTHO05D010671 2.6e-29 132.1 109 51.4
BolC3t14966H Brassica oleracea HOM05D008416 ORTHO05D010671 3.4e-29 131.7 110 51.8
BolC6t35558H Brassica oleracea HOM05D008416 ORTHO05D010671 3.4e-29 131.7 109 50.5
C09p35150 Brassica napus HOM05D008416 ORTHO05D010671 5.9e-29 131.0 103 56.3
BolC6t35552H Brassica oleracea HOM05D008416 ORTHO05D010671 5.9e-29 131.0 109 50.5
BolC9t56361H Brassica oleracea HOM05D008416 ORTHO05D010671 5.9e-29 131.0 103 56.3
BolC3t14967H Brassica oleracea HOM05D008416 ORTHO05D010671 7.7e-29 130.6 110 51.8
BolC6t35557H Brassica oleracea HOM05D008416 ORTHO05D010671 2.9e-28 128.6 108 50.0
A09p27720 Brassica napus HOM05D008416 ORTHO05D010671 3.8e-28 128.3 110 50.9
BraA06t23588Z Brassica rapa HOM05D008416 ORTHO05D010671 3.8e-28 128.3 110 50.9
BraA09t38342Z Brassica rapa HOM05D008416 ORTHO05D010671 3.8e-28 128.3 110 50.9
CARHR179970 Cardamine hirsuta HOM05D008416 ORTHO05D010671 8.5e-28 127.1 114 51.8
BraA06t23587Z Brassica rapa HOM05D008416 ORTHO05D010671 1.1e-27 126.7 98 54.1
AL5G23830 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 3.2e-27 125.2 114 51.8
Aa31LG4G14580 Aethionema arabicum HOM05D008416 ORTHO05D010671 1.6e-26 122.9 73 69.9
A06p03810 Brassica napus HOM05D008416 ORTHO05D010671 2.1e-26 122.5 110 49.1
AT3G45245 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 2.7e-26 122.1 114 48.2
BcaC02g10145 Brassica carinata HOM05D008416 ORTHO05D010671 6.1e-26 120.9 95 55.8
Carub.0005s1105 Capsella rubella HOM05D008416 ORTHO05D010671 1.7e-23 112.8 112 47.3
Thhalv10003095m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 6.3e-23 110.9 115 45.2
Carub.0005s1109 Capsella rubella HOM05D008416 ORTHO05D010671 5.3e-22 107.8 109 46.8
Aa31LG4G14590 Aethionema arabicum HOM05D008416 ORTHO05D010671 7.0e-22 107.5 97 50.5
AT3G45243 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 7.7e-21 104.0 114 46.5
AL5G23820 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 1.0e-20 103.6 114 43.0
Carub.0005s1104 Capsella rubella HOM05D008416 ORTHO05D010671 1.0e-20 103.6 110 48.2
Carub.0005s1108 Capsella rubella HOM05D008416 ORTHO05D010671 3.0e-17 92.0 109 41.3
AT3G45248 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 1.2e-16 90.1 110 34.5
CARHR150670 Cardamine hirsuta HOM05D008416 ORTHO05D010671 2.0e-16 89.4 90 50.0
AL5G23840 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 3.7e-15 85.1 104 34.6
Carub.0005s1110 Capsella rubella HOM05D008416 ORTHO05D010671 8.2e-15 84.0 73 43.8
CARHR150660 Cardamine hirsuta HOM05D008416 ORTHO05D010671 8.2e-15 84.0 98 39.8
Carub.0005s1185 Capsella rubella HOM05D008416 ORTHO05D010671 3.1e-14 82.0 123 39.0
THA.LOC104816129 Tarenaya hassleriana HOM05D008416 ORTHO05D010671 1.0e-12 77.0 102 37.3
AL5G23850 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 6.5e-12 74.3 101 37.6
AT3G45252 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 8.5e-12 73.9 104 38.5
Carub.0005s1184 Capsella rubella HOM05D008416 ORTHO05D010671 1.1e-11 73.6 115 33.9
THA.LOC104817594 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 1.5e-11 73.2 99 31.3
Carub.0005s1111 Capsella rubella HOM05D008416 ORTHO05D010671 4.0e-09 65.1 60 43.3
THA.LOC104817591 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 1.2e-08 63.5 99 29.3
THA.LOC104817592 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 1.2e-08 63.5 99 29.3
AL6G25820 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 2.0e-08 62.8 66 43.9
Sp6g29040 Schrenkiella parvula HOM05D009469 ORTHO05D011620 1.1e-06 57.0 65 38.5
AL6G25800 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 9.1e-06 53.9 65 38.5


User provided reference genes

Program Settings