Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.4e-86 322.0 148 100.0
AT5G38317 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 2.6e-48 195.7 148 66.2
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.7e-44 183.0 148 58.1
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 8.0e-42 174.1 148 56.8
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 4.0e-41 171.8 148 54.1
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 5.7e-40 167.9 148 53.4
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-36 156.8 150 52.0
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-36 156.8 150 52.0
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 1.3e-36 156.8 150 51.3
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 1.7e-36 156.4 113 59.3
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 5.0e-36 154.8 150 50.7
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 6.6e-36 154.5 149 50.3
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 1.5e-35 153.3 152 49.3
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.9e-35 152.9 152 50.7
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.6e-34 149.8 116 58.6
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 4.0e-33 145.2 114 55.3
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 1.2e-32 143.7 149 49.0
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 5.8e-32 141.4 153 45.8
A03p59420 Brassica napus HOM05D006945 ORTHO05D005549 3.7e-31 138.7 148 46.6
A03p59240 Brassica napus HOM05D006945 ORTHO05D005549 4.9e-31 138.3 148 45.9
C07p57440 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-30 137.1 152 48.7
BraA03t14998Z Brassica rapa HOM05D006945 ORTHO05D005549 1.1e-30 137.1 148 46.6
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 1.4e-30 136.7 111 53.2
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 1.4e-30 136.7 111 53.2
BolC6t36787H Brassica oleracea HOM05D006945 ORTHO05D005549 1.4e-30 136.7 148 45.9
BolC7t46212H Brassica oleracea HOM05D006945 ORTHO05D005549 5.4e-30 134.8 152 48.0
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 7.0e-30 134.4 143 49.0
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 9.2e-30 134.0 151 48.3
BcaC08g44188 Brassica carinata HOM05D006945 ORTHO05D005549 1.6e-29 133.3 151 46.4
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 1.7e-28 129.8 111 52.3
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 3.9e-28 128.6 111 53.2
Carub.0007s3775 Capsella rubella HOM05D006945 ORTHO05D005549 3.9e-28 128.6 143 49.7
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 6.6e-28 127.9 111 54.1
CARHR214260 Cardamine hirsuta HOM05D006945 ORTHO05D005549 6.6e-28 127.9 118 56.8
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 8.6e-28 127.5 111 54.1
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 8.6e-28 127.5 111 54.1
BcaNung00515 Brassica carinata HOM05D006945 ORTHO05D005549 1.5e-27 126.7 111 52.3
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 1.9e-27 126.3 111 53.2
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 1.9e-27 126.3 111 53.2
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 3.3e-27 125.6 112 50.0
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 3.3e-27 125.6 111 53.2
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 4.3e-27 125.2 112 50.9
C06p15950 Brassica napus HOM05D006945 ORTHO05D005549 5.6e-27 124.8 100 52.0
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 5.6e-27 124.8 124 50.0
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 5.6e-27 124.8 124 50.0
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-26 123.6 103 50.5
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-26 123.6 103 50.5
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 1.2e-26 123.6 103 50.5
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.2e-26 123.6 118 48.3
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 2.8e-26 122.5 114 50.9
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 2.8e-26 122.5 114 50.9
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 3.6e-26 122.1 111 52.3
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 3.6e-26 122.1 111 52.3
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 4.7e-26 121.7 112 50.0
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 2.3e-25 119.4 127 48.0
BcaC02g10382 Brassica carinata HOM05D006945 ORTHO05D005549 1.2e-24 117.1 117 44.4
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.2e-24 117.1 113 50.4
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 2.0e-24 116.3 100 50.0
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.0e-24 116.3 101 50.5
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.4e-24 115.5 112 47.3
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 4.4e-24 115.2 143 44.8
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 9.8e-24 114.0 141 41.1
BcaC02g10381 Brassica carinata HOM05D006945 ORTHO05D005549 2.9e-23 112.5 103 47.6
C04p29510 Brassica napus HOM05D006945 ORTHO05D005549 2.9e-23 112.5 103 47.6
Eucgr.C02226 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.9e-23 112.5 103 47.6
BcaC02g10365 Brassica carinata HOM05D006945 ORTHO05D005549 3.7e-23 112.1 103 47.6
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 4.9e-23 111.7 107 44.9
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 4.9e-23 111.7 107 44.9
Thhalv10026848m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.9e-22 109.8 108 50.0
BraA03t15590Z Brassica rapa HOM05D006945 ORTHO05D005549 2.4e-22 109.4 131 43.5
Carub.0007s1053 Capsella rubella HOM05D006945 ORTHO05D005549 2.4e-22 109.4 112 50.0
Eucgr.C02232 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.4e-22 109.4 103 45.6
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 5.4e-22 108.2 114 44.7
A03p65360 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-21 107.1 131 43.5
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-21 107.1 107 43.0
Eucgr.C02228 Eucalyptus grandis HOM05D006945 ORTHO05D005549 6.0e-21 104.8 103 47.6
Eucgr.C02231 Eucalyptus grandis HOM05D006945 ORTHO05D005549 6.0e-21 104.8 103 47.6
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 7.8e-21 104.4 105 47.6
BolC4t24502H Brassica oleracea HOM05D006945 ORTHO05D005549 2.3e-20 102.8 103 44.7
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 1.2e-18 97.1 131 36.6
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 1.6e-18 96.7 127 39.4
CARHR237980 Cardamine hirsuta HOM05D006945 ORTHO05D005549 4.7e-18 95.1 98 45.9
Eucgr.C02229 Eucalyptus grandis HOM05D006945 ORTHO05D005549 4.7e-18 95.1 101 43.6
A03p59410 Brassica napus HOM05D006945 ORTHO05D005549 6.2e-18 94.7 148 39.2
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 6.2e-18 94.7 109 41.3
Thhalv10026783m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 6.2e-18 94.7 138 39.9
Lj2g0024644 Lotus japonicus HOM05D006945 ORTHO05D005549 1.4e-17 93.6 104 42.3
C07p57430 Brassica napus HOM05D006945 ORTHO05D005549 1.8e-17 93.2 148 38.5
Cpa.g.sc95.22 Carica papaya HOM05D006945 ORTHO05D005549 1.8e-17 93.2 102 42.2
BraA03t14997Z Brassica rapa HOM05D006945 ORTHO05D005549 2.3e-17 92.8 148 38.5
Rhsim13G0155400 Rhododendron simsii HOM05D006945 ORTHO05D005549 1.9e-14 83.2 111 39.6
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 2.1e-13 79.7 106 40.6
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 3.5e-13 79.0 106 40.6
AL7G22170 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.3e-12 76.3 49 59.2
CARHR237960 Cardamine hirsuta HOM05D006945 ORTHO05D005549 6.6e-12 74.7 52 53.8
Potri.018G133200 Populus trichocarpa HOM05D009688 ORTHO05D005549 1.9e-11 73.2 122 36.1
Gorai.004G026300 Gossypium raimondii HOM05D009688 ORTHO05D005549 4.3e-11 72.0 100 40.0
Gohir.D08G029125 Gossypium hirsutum HOM05D009688 ORTHO05D005549 5.6e-11 71.6 112 39.3
TPR.G7879 Trifolium pratense HOM05D018581 ORTHO05D005549 5.6e-11 71.6 138 37.7
Medtr2g037190 Medicago truncatula HOM05D018581 ORTHO05D005549 1.2e-10 70.5 91 44.0
TPR.G30224 Trifolium pratense HOM05D006945 ORTHO05D005549 4.7e-10 68.6 102 34.3
Cpa.g.sc95.33 Carica papaya HOM05D009688 ORTHO05D005549 1.8e-09 66.6 106 34.0
TPR.G7878 Trifolium pratense HOM05D018581 ORTHO05D005549 1.7e-07 60.1 91 38.5
THA.LOC104803953 Tarenaya hassleriana HOM05D006945 ORTHO05D005549 8.4e-07 57.8 48 47.9
Thhalv10010998m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 7.1e-06 54.7 54 48.1
FvH4_2g17531 Fragaria vesca HOM05D024112 ORTHO05D005549 9.2e-06 54.3 108 32.4
FAN24G3255 Fragaria x ananassa HOM05D024112 ORTHO05D005549 9.2e-06 54.3 108 32.4
Phvul.009G237500 Phaseolus vulgaris HOM05D006945 ORTHO05D005549 9.2e-06 54.3 48 45.8
Psat0s3712g0120 Pisum sativum HOM05D009822 ORTHO05D011160 9.2e-06 54.3 123 29.3


User provided reference genes

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