Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 6.6e-193 677.2 333 100.0
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 6.6e-193 677.2 333 100.0
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 6.1e-183 644.0 334 96.4
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 3.1e-166 588.6 339 87.0
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 3.0e-153 545.4 344 82.6
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 7.3e-152 540.8 343 82.2
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 9.6e-152 540.4 329 82.7
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 9.6e-152 540.4 334 80.2
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 6.2e-151 537.7 343 81.6
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 6.9e-150 534.3 344 80.8
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 9.0e-150 533.9 344 80.8
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 6.4e-148 527.7 281 91.8
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 2.3e-145 519.2 289 88.9
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 3.1e-142 508.8 313 83.7
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 1.3e-132 476.9 319 73.7
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.6e-130 469.9 334 74.6
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 7.9e-130 467.6 324 69.8
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.3e-129 466.8 324 69.4
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.8e-129 466.5 324 69.8
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 3.0e-129 465.7 321 71.0
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 8.7e-129 464.2 325 71.4
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 1.1e-128 463.8 333 69.4
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 3.3e-128 462.2 346 67.3
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 5.6e-128 461.5 325 68.9
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 1.8e-126 456.4 330 69.1
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 4.0e-126 455.3 318 70.8
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 4.0e-126 455.3 313 71.2
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 5.3e-126 454.9 343 66.2
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 5.3e-126 454.9 318 70.8
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 1.5e-125 453.4 330 69.7
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 2.0e-125 453.0 327 68.5
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 2.0e-125 453.0 333 67.9
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 4.5e-125 451.8 326 68.4
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 7.6e-125 451.1 338 67.5
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 2.5e-123 446.0 327 68.5
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 2.5e-123 446.0 335 66.6
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 2.5e-123 446.0 321 69.5
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 4.2e-123 445.3 317 69.7
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 2.1e-122 443.0 334 68.3
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 2.1e-122 443.0 333 67.9
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 3.5e-122 442.2 333 66.7
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 4.6e-122 441.8 338 65.7
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 6.0e-122 441.4 323 68.4
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 1.3e-121 440.3 336 65.5
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 1.3e-121 440.3 331 66.5
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 1.8e-121 439.9 313 68.7
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 3.0e-121 439.1 317 66.9
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 3.0e-121 439.1 317 66.9
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 3.0e-121 439.1 341 66.0
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 3.9e-121 438.7 326 66.9
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 5.1e-121 438.3 332 66.9
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 6.7e-121 438.0 307 71.0
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 1.1e-120 437.2 327 67.6
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 2.5e-120 436.0 301 70.1
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 3.3e-120 435.6 314 68.2
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 5.7e-120 434.9 311 65.9
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 9.7e-120 434.1 316 67.4
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 1.1e-118 430.6 331 65.9
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 1.8e-118 429.9 319 68.0
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 3.1e-118 429.1 316 67.7
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 1.2e-117 427.2 329 66.3
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 2.0e-117 426.4 312 67.9
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 4.5e-117 425.2 319 65.5
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 4.5e-117 425.2 331 65.0
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 1.0e-116 424.1 328 64.9
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 1.7e-116 423.3 323 63.8
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 2.2e-116 422.9 334 63.8
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 1.1e-115 420.6 335 64.8
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 1.9e-115 419.9 336 65.8
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 9.4e-115 417.5 325 63.7
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 3.6e-114 415.6 330 61.5
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 5.1e-113 411.8 308 66.2
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 2.0e-112 409.8 301 65.8
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.3e-112 408.7 313 70.6
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 1.1e-110 404.1 300 68.3
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 4.1e-110 402.1 325 62.8
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.6e-109 399.4 307 62.5
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 2.2e-108 396.4 310 63.5
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 3.6e-106 389.0 326 63.2
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 2.2e-103 379.8 296 65.9
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 4.8e-103 378.6 210 89.0
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.2e-101 374.0 359 56.3
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 3.5e-101 372.5 207 89.9
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 7.4e-96 354.8 301 60.8
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 3.5e-93 345.9 263 66.9
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 5.5e-91 338.6 322 55.6
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 7.2e-91 338.2 317 57.7
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 8.0e-90 334.7 293 54.6
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.3e-87 327.4 225 72.0
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 4.1e-86 322.4 299 54.2
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 5.9e-85 318.5 231 68.0
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 8.5e-84 314.7 233 67.0
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 5.4e-78 295.4 313 53.4
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 7.7e-77 291.6 309 48.9
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 1.2e-72 277.7 220 65.5
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 1.2e-64 251.1 297 43.4
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 6.4e-63 245.4 120 100.0
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 6.6e-60 235.3 195 60.0
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 1.2e-58 231.1 355 36.9
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 4.7e-58 229.2 259 44.8
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 3.6e-50 203.0 171 63.7
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.1e-43 181.4 320 36.6
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 6.8e-41 172.2 204 46.1
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 5.8e-40 169.1 139 59.0
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 1.7e-36 157.5 210 45.7
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 6.9e-33 145.6 343 31.2
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 4.4e-32 142.9 102 68.6
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 2.2e-31 140.6 90 75.6
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.9e-30 137.5 88 76.1
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 1.0e-28 131.7 103 62.1
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.5e-27 127.9 275 31.3
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 1.4e-25 121.3 100 59.0
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 4.0e-25 119.8 94 64.9
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 9.9e-24 115.2 99 56.6
Mapoly0025s0077 Marchantia polymorpha HOM05D000224 ORTHO05D001489 2.2e-07 60.8 105 33.3
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 6.5e-07 59.3 30 80.0
ClCG01G016590 Citrullus lanatus HOM05D000224 ORTHO05D000337 3.2e-06 57.0 86 36.0
PGR102G1923 Punica granatum HOM05D000224 ORTHO05D000337 3.2e-06 57.0 140 30.7
Glyma.08G247700 Glycine max HOM05D000224 ORTHO05D001489 5.5e-06 56.2 101 27.7
Glyma.11G059551 Glycine max HOM05D000224 ORTHO05D000337 7.2e-06 55.8 106 30.2
DCAR_024125 Daucus carota HOM05D000224 ORTHO05D001489 9.3e-06 55.5 139 28.8


User provided reference genes

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