Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.4e-195 686.0 340 100.0
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.4e-182 642.9 334 96.4
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.4e-182 642.9 334 96.4
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 1.2e-170 603.2 341 87.4
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 2.4e-158 562.4 350 82.9
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 1.3e-156 556.6 329 83.6
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 2.2e-156 555.8 349 82.2
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 2.9e-156 555.4 340 80.3
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 1.9e-155 552.7 349 81.7
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 9.4e-155 550.4 350 81.4
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 3.6e-154 548.5 350 81.1
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 3.1e-150 535.4 287 91.6
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 1.1e-147 526.9 293 88.4
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 8.0e-146 520.8 313 84.0
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.8e-137 493.0 340 75.9
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 1.0e-132 477.2 319 73.7
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 1.0e-132 477.2 331 70.7
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 2.3e-132 476.1 322 71.1
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 3.9e-132 475.3 322 70.8
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 5.0e-132 474.9 322 71.1
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 1.6e-130 469.9 332 70.5
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 2.8e-130 469.2 324 70.4
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.1e-129 467.2 346 68.5
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 1.4e-129 466.8 343 67.1
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 2.3e-129 466.1 325 70.8
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 1.5e-128 463.4 309 72.5
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 4.4e-128 461.8 333 69.1
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 4.4e-128 461.8 328 69.2
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 7.5e-128 461.1 336 68.2
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 7.5e-128 461.1 328 70.1
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 6.4e-127 458.0 336 68.2
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 1.1e-126 457.2 327 68.8
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 1.4e-126 456.8 334 69.2
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 9.2e-126 454.1 347 66.0
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 1.6e-125 453.4 330 70.0
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 6.0e-125 451.4 325 68.6
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 6.0e-125 451.4 333 68.2
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 1.3e-124 450.3 325 68.9
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 3.9e-124 448.7 331 66.8
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 5.1e-124 448.4 336 69.0
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 6.6e-124 448.0 340 67.4
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 4.3e-123 445.3 326 66.9
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 4.3e-123 445.3 319 69.3
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 5.6e-123 444.9 347 64.6
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 1.2e-122 443.7 336 66.7
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 1.6e-122 443.4 331 66.2
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 2.8e-122 442.6 333 66.7
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 6.2e-122 441.4 332 67.2
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 8.1e-122 441.0 341 66.0
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 2.3e-121 439.5 336 64.6
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 2.3e-121 439.5 336 64.6
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 4.0e-121 438.7 307 70.7
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 6.8e-121 438.0 311 70.4
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.2e-120 437.2 301 69.8
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 2.0e-120 436.4 314 67.8
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 2.6e-120 436.0 316 67.7
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 2.6e-120 436.0 320 66.2
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 7.6e-120 434.5 322 67.4
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 7.6e-120 434.5 323 65.3
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 4.9e-119 431.8 323 67.5
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 8.3e-119 431.0 318 67.3
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 1.9e-118 429.9 320 66.9
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 3.2e-118 429.1 326 63.5
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 3.2e-118 429.1 320 65.9
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 7.1e-118 427.9 344 63.1
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 2.7e-117 426.0 338 63.9
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 2.7e-117 426.0 311 65.0
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 6.0e-117 424.9 335 65.4
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 7.8e-117 424.5 343 64.4
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 6.6e-116 421.4 326 63.8
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.2e-114 417.2 319 71.5
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 6.2e-114 414.8 301 66.8
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 3.1e-113 412.5 323 64.4
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 4.4e-112 408.7 330 60.9
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 6.4e-111 404.8 300 68.0
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.9e-110 403.3 337 62.0
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 1.2e-109 400.6 310 63.5
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.2e-109 400.6 307 62.2
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 4.6e-109 398.7 331 63.1
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 8.1e-106 387.9 288 68.1
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 6.9e-105 384.8 210 89.5
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 9.9e-104 380.9 350 58.0
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 1.7e-100 370.2 209 88.5
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 1.5e-96 357.1 301 60.8
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 1.2e-93 347.4 274 64.6
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 7.9e-93 344.7 317 58.7
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 2.8e-90 336.3 293 54.3
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 8.1e-90 334.7 324 54.9
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 5.3e-89 332.0 233 70.4
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 3.8e-87 325.9 299 53.8
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 2.7e-85 319.7 239 66.9
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 2.5e-83 313.2 235 66.0
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.7e-79 300.4 313 54.0
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 8.7e-76 288.1 309 47.9
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 9.0e-73 278.1 220 66.8
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 1.5e-64 250.8 297 43.1
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.7e-61 239.2 122 97.5
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 8.8e-60 235.0 198 59.1
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 1.5e-59 234.2 355 37.2
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 7.7e-56 221.9 259 43.6
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 6.7e-52 208.8 171 64.9
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.4e-44 184.5 320 36.6
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 4.1e-41 172.9 201 46.8
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 3.8e-39 166.4 139 58.3
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 2.7e-37 160.2 209 46.4
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 1.4e-33 147.9 102 69.6
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 1.6e-32 144.4 90 77.8
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 2.0e-32 144.1 343 30.9
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 7.7e-32 142.1 96 71.9
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 4.7e-29 132.9 102 62.7
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.3e-26 124.8 275 31.3
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 3.7e-26 123.2 97 63.9
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 3.7e-26 123.2 100 61.0
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 1.7e-23 114.4 99 56.6
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 6.6e-07 59.3 30 80.0
Mapoly0025s0077 Marchantia polymorpha HOM05D000224 ORTHO05D001489 6.6e-07 59.3 105 33.3
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.9e-06 57.8 53 54.7
DCAR_024125 Daucus carota HOM05D000224 ORTHO05D001489 9.5e-06 55.5 139 28.8
Glyma.08G247700 Glycine max HOM05D000224 ORTHO05D001489 9.5e-06 55.5 101 27.7


User provided reference genes

Program Settings