Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.1e-69 264.2 129 100.0
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.1e-63 246.5 120 100.0
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.1e-63 246.5 120 100.0
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 7.9e-62 240.4 122 97.5
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 7.9e-62 240.4 122 97.5
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 6.7e-53 210.7 120 87.5
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 1.3e-51 206.5 128 81.2
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 1.0e-48 196.8 128 78.9
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 2.9e-48 195.3 129 75.2
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 1.1e-47 193.4 129 77.5
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 9.4e-47 190.3 128 77.3
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 2.7e-46 188.7 128 76.6
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 8.0e-46 187.2 129 74.4
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 8.0e-46 187.2 129 74.4
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 5.2e-45 184.5 122 74.6
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 1.6e-38 162.9 123 63.4
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.6e-38 162.9 113 66.4
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.6e-38 162.9 113 66.4
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.1e-38 162.5 75 100.0
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 8.0e-38 160.6 113 65.5
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 1.8e-37 159.5 108 70.4
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 1.8e-37 159.5 116 66.4
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 2.3e-37 159.1 120 62.5
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 2.3e-37 159.1 135 60.7
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 5.2e-37 157.9 135 60.7
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 8.8e-37 157.1 113 69.0
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 1.5e-36 156.4 107 71.0
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 2.6e-36 155.6 122 66.4
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 3.4e-36 155.2 118 64.4
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 3.4e-36 155.2 116 66.4
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 4.4e-36 154.8 114 63.2
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 4.4e-36 154.8 132 60.6
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 7.5e-36 154.1 122 62.3
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 7.5e-36 154.1 109 67.0
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 9.8e-36 153.7 107 68.2
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 1.3e-35 153.3 106 67.9
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 2.8e-35 152.1 130 60.8
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 2.8e-35 152.1 123 61.0
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 3.7e-35 151.8 122 63.1
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 4.8e-35 151.4 102 69.6
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 8.3e-35 150.6 123 60.2
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 8.3e-35 150.6 112 64.3
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 1.4e-34 149.8 110 63.6
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 1.4e-34 149.8 110 63.6
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 1.4e-34 149.8 115 64.3
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.4e-34 149.8 104 65.4
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 1.8e-34 149.4 124 59.7
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 1.8e-34 149.4 119 61.3
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 2.4e-34 149.1 107 66.4
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 3.1e-34 148.7 107 63.6
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 3.1e-34 148.7 114 62.3
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 7.0e-34 147.5 140 55.0
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 1.2e-33 146.7 124 61.3
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 1.2e-33 146.7 127 60.6
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 1.6e-33 146.4 124 62.1
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 1.6e-33 146.4 110 64.5
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 1.6e-33 146.4 124 61.3
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 2.0e-33 146.0 124 60.5
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 2.7e-33 145.6 107 63.6
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 7.7e-33 144.1 124 58.1
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 7.7e-33 144.1 122 60.7
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 1.0e-32 143.7 112 63.4
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 1.7e-32 142.9 108 63.0
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 1.7e-32 142.9 123 56.9
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.3e-32 142.5 95 67.4
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 2.3e-32 142.5 109 63.3
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 2.9e-32 142.1 118 60.2
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 2.9e-32 142.1 116 58.6
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 2.9e-32 142.1 121 58.7
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 3.8e-32 141.7 112 58.9
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 3.8e-32 141.7 90 77.8
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 5.0e-32 141.4 119 58.8
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 8.6e-32 140.6 141 52.5
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 8.6e-32 140.6 100 67.0
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.1e-31 140.2 108 61.1
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 1.5e-31 139.8 110 60.9
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 1.5e-31 139.8 126 56.3
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 2.5e-31 139.0 69 91.3
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 4.2e-31 138.3 113 61.1
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 5.5e-31 137.9 121 57.0
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 9.5e-31 137.1 115 59.1
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 9.5e-31 137.1 77 84.4
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.6e-30 136.3 90 72.2
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 2.8e-30 135.6 110 58.2
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 1.0e-29 133.7 107 58.9
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 4.0e-29 131.7 103 62.1
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 8.8e-29 130.6 101 62.4
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 4.4e-28 128.3 97 61.9
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 3.7e-27 125.2 105 56.2
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 1.8e-26 122.9 106 61.3
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 1.0e-24 117.1 106 54.7
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 2.3e-24 115.9 99 56.6
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 1.1e-23 113.6 86 58.1
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 8.0e-22 107.5 95 54.7
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 2.9e-19 99.0 93 52.7
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 1.6e-17 93.2 81 55.6
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 7.8e-17 90.9 116 44.0
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 3.1e-13 79.0 52 65.4
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 4.0e-13 78.6 61 59.0
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 2.5e-07 59.3 30 80.0
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 3.3e-07 58.9 49 49.0


User provided reference genes

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