Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G51670 Arabidopsis lyrata HOM05D012419 ORTHO05D014425 4.2e-50 201.1 101 100.0
Carub.0007s3710 Capsella rubella HOM05D012419 ORTHO05D014425 1.1e-42 176.4 101 87.1
SpUn0124_0010 Schrenkiella parvula HOM05D012419 ORTHO05D014425 1.3e-38 162.9 101 82.2
SpUn0185_0010 Schrenkiella parvula HOM05D012419 ORTHO05D014425 1.3e-38 162.9 101 82.2
AT5G38770 Arabidopsis thaliana HOM05D012419 ORTHO05D014425 1.6e-38 162.5 101 85.1
CARHR264040 Cardamine hirsuta HOM05D012419 ORTHO05D014425 1.4e-37 159.5 101 80.2
CARHR291810 Cardamine hirsuta HOM05D012419 ORTHO05D014425 5.3e-37 157.5 101 79.2
BcaC02g09667 Brassica carinata HOM05D012419 ORTHO05D014425 1.0e-35 153.3 101 76.2
C04p45360 Brassica napus HOM05D012419 ORTHO05D014425 1.0e-35 153.3 101 76.2
BolC4t26118H Brassica oleracea HOM05D012419 ORTHO05D014425 1.0e-35 153.3 101 76.2
Thhalv10028105m.g Eutrema salsugineum HOM05D012419 ORTHO05D014425 1.3e-35 152.9 101 78.2
A04p11630 Brassica napus HOM05D012419 ORTHO05D014425 2.9e-35 151.8 101 75.2
BraA04t16831Z Brassica rapa HOM05D012419 ORTHO05D014425 2.9e-35 151.8 101 75.2
BcaB06g27241 Brassica carinata HOM05D012419 ORTHO05D014425 2.2e-27 125.6 89 70.8
Aa31LG9G16890 Aethionema arabicum HOM05D000926 ORTHO05D000707 4.1e-21 104.8 96 59.4
THA.LOC109116337 Tarenaya hassleriana HOM05D000926 ORTHO05D000707 8.5e-19 97.1 101 53.5
Potri.004G108440 Populus trichocarpa HOM05D000926 ORTHO05D000707 2.9e-11 72.0 98 46.9
Thecc.04G113000 Theobroma cacao HOM05D000926 ORTHO05D000707 1.1e-10 70.1 83 45.8
Lalb_Chr10g0092471 Lupinus albus HOM05D000926 ORTHO05D000707 9.4e-10 67.0 97 43.3
Duzib138G1671 Durio zibethinus HOM05D000926 ORTHO05D000707 1.2e-09 66.6 77 49.4
Cfa007731 Carpinus fangiana HOM05D000926 ORTHO05D000707 2.1e-09 65.9 85 41.2
Dinv34883 Davidia involucrata HOM05D000926 ORTHO05D000707 2.1e-09 65.9 87 46.0
Haze_14349 Corylus avellana HOM05D000926 ORTHO05D000707 4.7e-09 64.7 88 40.9
Potri.017G107300 Populus trichocarpa HOM05D000926 ORTHO05D000707 6.1e-09 64.3 88 43.2
Manes.02G062600 Manihot esculenta HOM05D000926 ORTHO05D000707 8.0e-09 63.9 83 45.8
Potri.017G107400 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.0e-08 63.5 91 42.9
QL02p063891 Quercus lobata HOM05D000926 ORTHO05D000707 1.8e-08 62.8 91 40.7
Gohir.D07G185000 Gossypium hirsutum HOM05D000926 ORTHO05D000707 3.0e-08 62.0 80 46.2
Gorai.001G205500 Gossypium raimondii HOM05D000926 ORTHO05D000707 3.0e-08 62.0 80 46.2
Sabra04G0074000 Salix brachista HOM05D000926 ORTHO05D000707 3.0e-08 62.0 94 43.6
CiPaw.03G080100 Carya illinoinensis HOM05D000926 ORTHO05D000707 6.7e-08 60.8 93 40.9
Ciclev10013138m.g Citrus clementina HOM05D000926 ORTHO05D000707 6.7e-08 60.8 86 43.0
Gohir.A07G178200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 1.1e-07 60.1 80 45.0
Medtr7g018090 Medicago truncatula HOM05D000926 ORTHO05D000707 1.1e-07 60.1 86 40.7
Potri.004G108680 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.1e-07 60.1 98 36.7
PGR004G2735 Punica granatum HOM05D000926 ORTHO05D000707 1.1e-07 60.1 93 39.8
Duzib211G0100 Durio zibethinus HOM05D000926 ORTHO05D000707 1.5e-07 59.7 92 44.6
Rhsim08G0078900 Rhododendron simsii HOM05D000926 ORTHO05D000707 1.5e-07 59.7 84 39.3
MSTRG.2959 Avicennia marina HOM05D000926 ORTHO05D000707 4.4e-07 58.2 92 37.0
Manes.01G106100 Manihot esculenta HOM05D000926 ORTHO05D000707 4.4e-07 58.2 87 41.4
Potri.017G107200 Populus trichocarpa HOM05D000926 ORTHO05D000707 4.4e-07 58.2 88 38.6
Sabra17G0090100 Salix brachista HOM05D000926 ORTHO05D000707 5.7e-07 57.8 84 40.5
Psat1g064720 Pisum sativum HOM05D000926 ORTHO05D000707 7.5e-07 57.4 87 37.9
Aqoxy3G03797 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 9.7e-07 57.0 77 44.2
Hma1.2p1_0588F.1_g184540 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 9.7e-07 57.0 84 42.9
Nn3g17603 Nelumbo nucifera HOM05D000926 ORTHO05D000707 9.7e-07 57.0 95 34.7
Sabra17G0090200 Salix brachista HOM05D000926 ORTHO05D000707 1.3e-06 56.6 85 44.7
ATR0691G108 Amborella trichopoda HOM05D000926 ORTHO05D000707 1.7e-06 56.2 79 40.5
CSS0017323 Camellia sinensis var. sinensis HOM05D000926 ORTHO05D000707 1.7e-06 56.2 88 40.9
Psat1g064600 Pisum sativum HOM05D000926 ORTHO05D000707 1.7e-06 56.2 87 36.8
Atru.chr2.1223 Acer truncatum HOM05D000926 ORTHO05D000707 2.2e-06 55.8 61 42.6
Hma1.2p1_2231F.1_g317580 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 3.7e-06 55.1 83 39.8
Aqoxy3G00596 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 4.8e-06 54.7 80 38.8
TAR374G1048 Trochodendron aralioides HOM05D000926 ORTHO05D000707 4.8e-06 54.7 83 37.3
MELO3C018927.2 Cucumis melo HOM05D000926 ORTHO05D000707 6.3e-06 54.3 90 35.6
Manes.02G062400 Manihot esculenta HOM05D000926 ORTHO05D000707 6.3e-06 54.3 86 38.4
Potri.004G108800 Populus trichocarpa HOM05D000926 ORTHO05D000707 6.3e-06 54.3 89 33.7
Sc10g0000430 Simmondsia chinensis HOM05D000926 ORTHO05D000707 6.3e-06 54.3 85 37.6
Oeu049341.1 Olea europaea HOM05D000926 ORTHO05D000707 8.2e-06 53.9 81 40.7


User provided reference genes

Program Settings