Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 4.8e-85 317.8 158 100.0
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 3.8e-74 281.6 158 89.9
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 2.0e-67 259.2 158 84.2
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 3.4e-67 258.5 158 84.2
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 8.5e-66 253.8 158 80.4
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 5.5e-65 251.1 158 81.0
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 5.1e-63 244.6 158 77.8
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 8.8e-63 243.8 158 77.8
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 4.4e-62 241.5 158 77.2
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 4.4e-62 241.5 158 77.2
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 9.7e-62 240.4 158 77.2
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 9.7e-62 240.4 158 77.2
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 5.0e-50 201.4 158 69.0
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 5.0e-50 201.4 158 69.0
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 3.8e-42 175.3 163 59.5
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 9.5e-41 170.6 158 57.6
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 8.6e-34 147.5 158 49.4
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 8.6e-34 147.5 164 53.7
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 1.9e-33 146.4 135 54.1
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.9e-33 146.4 93 71.0
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.9e-33 146.4 93 71.0
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 1.9e-33 146.4 93 71.0
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 1.9e-33 146.4 159 50.3
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 3.3e-33 145.6 158 48.7
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 4.3e-33 145.2 158 48.7
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 5.6e-33 144.8 158 50.0
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 9.5e-33 144.1 93 68.8
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 9.5e-33 144.1 93 68.8
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.2e-32 143.7 93 68.8
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 1.6e-32 143.3 160 48.1
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 4.7e-32 141.7 160 50.6
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 6.1e-32 141.4 160 47.5
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 6.1e-32 141.4 155 47.1
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 1.0e-31 140.6 157 49.7
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 2.3e-31 139.4 112 58.9
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 4.0e-31 138.7 164 47.6
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 4.0e-31 138.7 168 49.4
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 5.2e-31 138.3 93 66.7
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 5.2e-31 138.3 102 62.7
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 5.2e-31 138.3 90 70.0
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 5.2e-31 138.3 103 62.1
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 6.8e-31 137.9 90 68.9
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 8.9e-31 137.5 94 68.1
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 1.5e-30 136.7 97 63.9
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 1.5e-30 136.7 157 47.1
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 2.0e-30 136.3 100 65.0
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 2.6e-30 136.0 93 69.9
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 3.4e-30 135.6 157 47.1
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 3.4e-30 135.6 101 62.4
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 4.4e-30 135.2 144 50.0
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 5.7e-30 134.8 149 52.3
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 5.7e-30 134.8 156 48.7
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 7.5e-30 134.4 158 47.5
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 1.3e-29 133.7 91 68.1
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 1.7e-29 133.3 115 58.3
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 1.7e-29 133.3 113 57.5
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 2.2e-29 132.9 113 56.6
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 2.2e-29 132.9 148 45.9
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 2.9e-29 132.5 107 60.7
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 4.9e-29 131.7 158 48.1
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 4.9e-29 131.7 93 63.4
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 4.9e-29 131.7 93 63.4
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 6.4e-29 131.3 103 60.2
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 8.3e-29 131.0 154 48.1
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 8.3e-29 131.0 113 55.8
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 1.1e-28 130.6 158 44.3
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.4e-28 130.2 115 53.9
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 1.4e-28 130.2 100 65.0
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 2.4e-28 129.4 102 61.8
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 2.4e-28 129.4 133 54.1
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 3.2e-28 129.0 101 62.4
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 5.4e-28 128.3 99 58.6
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 9.2e-28 127.5 158 45.6
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.2e-27 127.1 89 61.8
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 1.6e-27 126.7 154 46.1
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 2.0e-27 126.3 91 67.0
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 2.0e-27 126.3 154 47.4
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 2.7e-27 125.9 159 47.8
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 2.7e-27 125.9 91 63.7
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 2.7e-27 125.9 160 45.6
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 3.5e-27 125.6 80 71.2
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 3.5e-27 125.6 165 44.8
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 4.6e-27 125.2 101 60.4
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 4.6e-27 125.2 113 56.6
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 7.8e-27 124.4 79 68.4
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 7.8e-27 124.4 160 46.2
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 1.0e-26 124.0 122 53.3
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 3.9e-26 122.1 103 56.3
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 3.9e-26 122.1 82 67.1
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 6.6e-26 121.3 151 44.4
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 2.8e-24 115.9 110 50.0
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 1.4e-23 113.6 98 52.0
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 2.9e-21 105.9 89 57.3
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 6.4e-21 104.8 86 52.3
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 2.4e-20 102.8 81 56.8
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 8.6e-18 94.4 78 53.8
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 1.1e-15 87.4 81 53.1
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 1.4e-15 87.0 69 59.4
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 1.8e-15 86.7 75 56.0
C04p49790 Brassica napus HOM05D007565 ORTHO05D009551 1.7e-10 70.1 63 57.1
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 6.6e-10 68.2 49 61.2
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 3.6e-08 62.4 48 60.4


User provided reference genes

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