Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 1.0e-145 520.0 252 100.0
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 1.6e-138 496.1 253 95.3
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 6.4e-132 474.2 252 89.7
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 2.4e-131 472.2 252 88.9
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 2.1e-130 469.2 252 87.7
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 6.0e-130 467.6 252 89.7
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 3.1e-126 455.3 252 85.3
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 3.1e-126 455.3 252 85.3
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 3.1e-126 455.3 252 85.3
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 3.1e-126 455.3 252 85.3
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 1.2e-125 453.4 252 84.9
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 4.9e-124 448.0 252 84.1
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 2.8e-119 432.2 252 81.3
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 8.7e-113 410.6 250 78.0
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 4.5e-101 371.7 252 69.4
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 2.4e-99 365.9 252 68.7
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 4.2e-99 365.2 252 66.7
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 2.7e-98 362.5 249 67.9
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 3.5e-98 362.1 252 67.5
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 4.6e-98 361.7 254 66.1
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 6.0e-98 361.3 249 67.9
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 1.8e-97 359.8 248 66.9
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 3.9e-97 358.6 252 65.9
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 8.7e-97 357.5 254 67.3
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 1.1e-96 357.1 252 67.1
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 1.1e-96 357.1 248 67.3
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.5e-96 356.7 249 65.9
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 2.5e-96 355.9 252 66.7
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 4.3e-96 355.1 254 65.0
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 5.6e-96 354.8 252 65.5
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 5.6e-96 354.8 246 67.1
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 7.4e-96 354.4 252 64.7
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 7.4e-96 354.4 252 64.7
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 9.6e-96 354.0 254 66.1
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 9.6e-96 354.0 252 66.3
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 9.6e-96 354.0 252 66.3
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 6.2e-95 351.3 252 64.7
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 8.1e-95 350.9 252 65.9
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.4e-94 350.1 252 63.9
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 1.8e-94 349.7 252 65.1
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 2.4e-94 349.4 249 65.1
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 2.4e-94 349.4 254 65.7
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 6.9e-94 347.8 254 65.4
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 6.9e-94 347.8 252 64.3
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 9.0e-94 347.4 252 63.9
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 9.0e-94 347.4 252 64.7
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 1.2e-93 347.1 254 65.0
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 2.0e-93 346.3 249 65.5
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 2.6e-93 345.9 252 63.9
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 4.5e-93 345.1 252 65.5
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 5.8e-93 344.7 253 65.2
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 5.8e-93 344.7 252 62.3
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 1.3e-92 343.6 254 64.6
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 1.3e-92 343.6 253 65.2
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 2.2e-92 342.8 252 63.9
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 2.2e-92 342.8 252 64.3
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 2.9e-92 342.4 252 63.1
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 2.9e-92 342.4 252 64.3
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 6.4e-92 341.3 254 65.0
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 6.4e-92 341.3 248 64.1
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 8.4e-92 340.9 254 64.6
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 1.9e-91 339.7 253 64.4
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 1.9e-91 339.7 254 63.8
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 3.2e-91 339.0 254 64.2
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 4.2e-91 338.6 252 64.7
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 5.5e-91 338.2 252 63.1
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 7.1e-91 337.8 253 63.6
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 7.1e-91 337.8 248 62.9
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 1.6e-90 336.7 252 60.7
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.6e-90 336.7 252 63.1
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 2.7e-90 335.9 253 63.2
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 1.0e-89 334.0 252 63.5
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 1.3e-89 333.6 249 62.7
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 1.3e-89 333.6 253 62.8
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 3.9e-89 332.0 253 62.5
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 6.7e-89 331.3 252 63.1
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 8.7e-89 330.9 247 63.6
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 8.7e-89 330.9 253 61.7
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 1.9e-88 329.7 252 61.9
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 7.4e-88 327.8 247 63.2
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 7.4e-88 327.8 252 60.7
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 1.6e-87 326.6 252 61.5
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 2.1e-87 326.2 252 60.3
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 2.1e-87 326.2 249 60.6
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 1.8e-86 323.2 251 59.0
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 1.2e-85 320.5 252 60.3
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 5.8e-85 318.2 252 60.3
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 1.7e-84 316.6 264 59.8
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 2.2e-84 316.2 252 61.5
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 2.2e-84 316.2 253 58.9
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 3.8e-84 315.5 248 59.3
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 1.9e-83 313.2 253 60.1
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 4.2e-83 312.0 252 60.7
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 4.3e-80 302.0 230 62.2
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 5.7e-80 301.6 252 56.7
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 5.9e-77 291.6 248 54.4
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 1.1e-75 287.3 239 55.2
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 2.5e-75 286.2 241 58.1
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 4.6e-74 282.0 252 55.6
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 1.8e-73 280.0 249 56.2
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 2.3e-73 279.6 203 62.1
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 2.2e-71 273.1 251 52.6
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 1.0e-68 264.2 247 53.0
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 1.3e-68 263.8 252 50.8
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 1.7e-60 236.9 251 45.8
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 1.6e-58 230.3 252 45.2
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 3.0e-57 226.1 269 44.2
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 7.7e-53 211.5 151 60.3
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 4.4e-48 195.7 285 43.2
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 1.1e-46 191.0 136 67.6
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 2.3e-41 173.3 260 41.9
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 4.4e-40 169.1 112 66.1
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 1.3e-36 157.5 101 75.2
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 2.2e-31 140.2 97 69.1
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 2.3e-20 103.6 72 58.3
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 2.8e-18 96.7 161 39.8
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 6.8e-17 92.0 89 52.8
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 5.8e-16 89.0 54 63.0
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 2.2e-15 87.0 49 69.4
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 3.2e-14 83.2 45 80.0


User provided reference genes

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