Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 3.2e-62 241.5 116 100.0
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 1.8e-57 225.7 116 94.0
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 1.3e-55 219.5 116 92.2
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 1.1e-54 216.5 125 86.4
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 7.1e-54 213.8 117 91.5
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 1.6e-53 212.6 118 89.8
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 1.6e-53 212.6 118 89.8
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 3.0e-52 208.4 118 89.0
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 3.0e-52 208.4 118 89.0
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 3.0e-52 208.4 118 89.0
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 1.1e-46 189.9 119 80.7
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 1.8e-41 172.6 116 71.6
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 2.0e-40 169.1 99 78.8
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 1.0e-39 166.8 99 78.8
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 1.3e-39 166.4 116 70.7
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.3e-39 166.4 116 70.7
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.3e-39 166.4 116 70.7
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.3e-39 166.4 116 70.7
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 1.7e-39 166.0 99 82.8
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 2.2e-39 165.6 112 70.5
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.2e-39 165.6 116 69.8
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 3.8e-39 164.9 118 63.6
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 5.0e-39 164.5 98 76.5
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 6.5e-39 164.1 99 76.8
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 1.1e-38 163.3 104 74.0
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 1.1e-38 163.3 104 74.0
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 1.9e-38 162.5 117 68.4
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 1.9e-38 162.5 99 76.8
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 4.2e-38 161.4 98 78.6
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 4.2e-38 161.4 113 70.8
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 5.5e-38 161.0 97 80.4
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 5.5e-38 161.0 98 75.5
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 7.2e-38 160.6 112 71.4
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 7.2e-38 160.6 112 71.4
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 7.2e-38 160.6 99 75.8
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 1.2e-37 159.8 99 74.7
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 1.6e-37 159.5 100 74.0
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 1.6e-37 159.5 109 69.7
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.6e-37 159.5 117 69.2
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 1.6e-37 159.5 100 76.0
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 2.1e-37 159.1 99 73.7
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 2.1e-37 159.1 116 69.0
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 2.7e-37 158.7 97 78.4
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 2.7e-37 158.7 100 73.0
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 2.7e-37 158.7 99 74.7
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 3.6e-37 158.3 100 75.0
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 3.6e-37 158.3 100 75.0
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 4.7e-37 157.9 99 74.7
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 4.7e-37 157.9 99 72.7
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 7.9e-37 157.1 99 75.8
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 1.4e-36 156.4 98 74.5
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.4e-36 156.4 120 65.8
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.4e-36 156.4 120 65.8
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.4e-36 156.4 95 78.9
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 1.8e-36 156.0 98 76.5
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 1.8e-36 156.0 98 75.5
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 1.8e-36 156.0 99 71.7
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 2.3e-36 155.6 98 74.5
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 3.0e-36 155.2 97 75.3
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 3.9e-36 154.8 100 72.0
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 3.9e-36 154.8 95 78.9
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 5.1e-36 154.5 99 72.7
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 5.1e-36 154.5 116 64.7
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 8.8e-36 153.7 98 73.5
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 8.8e-36 153.7 97 74.2
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.1e-35 153.3 97 74.2
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 1.1e-35 153.3 98 73.5
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 1.5e-35 152.9 98 73.5
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 1.5e-35 152.9 99 69.7
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 7.4e-35 150.6 100 71.0
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 7.4e-35 150.6 126 61.1
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 9.7e-35 150.2 117 67.5
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 9.7e-35 150.2 116 62.9
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 1.7e-34 149.4 99 70.7
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 1.7e-34 149.4 116 62.9
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 6.3e-34 147.5 94 74.5
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 8.2e-34 147.1 105 62.9
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 8.2e-34 147.1 116 64.7
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 2.4e-33 145.6 115 58.3
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 3.1e-33 145.2 85 78.8
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 3.1e-33 145.2 99 69.7
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 5.3e-33 144.4 121 58.7
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 1.2e-32 143.3 97 69.1
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 3.5e-32 141.7 80 80.0
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 5.9e-32 141.0 110 63.6
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 1.0e-31 140.2 118 59.3
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 8.5e-31 137.1 124 54.0
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 1.8e-28 129.4 101 57.4
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 6.3e-26 120.9 95 55.8
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 8.2e-26 120.6 99 56.6
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 1.7e-23 112.8 83 66.3
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 2.2e-23 112.5 92 60.9
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 3.8e-23 111.7 95 60.0
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 1.9e-22 109.4 92 50.0
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 3.6e-21 105.1 100 47.0
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 6.8e-20 100.9 64 73.4
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 1.2e-19 100.1 60 78.3
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 2.5e-14 82.4 77 46.8
MCO04G361 Micromonas commoda HOM05D007622 ORTHO05D009409 3.5e-08 62.0 77 39.0
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 4.2e-06 55.1 38 57.9


User provided reference genes

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