Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G48400 Arabidopsis lyrata HOM05D008078 ORTHO05D010263 2.2e-123 445.7 228 100.0
AL7G48410 Arabidopsis lyrata HOM05D008078 ORTHO05D010263 4.8e-54 215.3 272 51.8
AL7G48420 Arabidopsis lyrata HOM05D008078 ORTHO05D010263 1.0e-51 207.6 270 51.5
Carub.0007s3436 Capsella rubella HOM05D008078 ORTHO05D010263 7.2e-50 201.4 258 49.2
AL7G48390 Arabidopsis lyrata HOM05D008078 ORTHO05D010263 3.2e-42 176.0 264 43.6
CARHR174860 Cardamine hirsuta HOM05D008078 ORTHO05D010263 8.0e-41 171.4 224 46.9
Carub.0007s3435 Capsella rubella HOM05D008078 ORTHO05D010263 1.2e-39 167.5 227 47.6
Sp7g04640 Schrenkiella parvula HOM05D008078 ORTHO05D010263 4.1e-37 159.1 268 44.8
AL4G32490 Arabidopsis lyrata HOM05D008078 ORTHO05D010263 8.3e-30 134.8 350 31.4
Sp4g18600 Schrenkiella parvula HOM05D008078 ORTHO05D010263 1.4e-29 134.0 300 33.3
Sp4g18590 Schrenkiella parvula HOM05D008078 ORTHO05D010263 2.4e-29 133.3 255 36.9
Aa31LG5G23920 Aethionema arabicum HOM05D008078 ORTHO05D010263 9.5e-26 121.3 272 34.6
Sp7g05390 Schrenkiella parvula HOM05D008078 ORTHO05D010263 4.0e-24 115.9 213 37.6
SpUn0053_0030 Schrenkiella parvula HOM05D008078 ORTHO05D010263 4.0e-24 115.9 213 37.6
Carub.0004s1812 Capsella rubella HOM05D008078 ORTHO05D010263 5.2e-24 115.5 327 29.7
Thhalv10016755m.g Eutrema salsugineum HOM05D008078 ORTHO05D010263 1.2e-23 114.4 357 27.2
A07p20550 Brassica napus HOM05D008078 ORTHO05D010263 2.0e-23 113.6 201 35.8
BolC7t42029H Brassica oleracea HOM05D008078 ORTHO05D010263 3.4e-23 112.8 202 36.6
BolC4t28017H Brassica oleracea HOM05D008078 ORTHO05D010263 5.0e-19 99.0 344 28.8
A04p27870 Brassica napus HOM05D008078 ORTHO05D010263 8.6e-19 98.2 166 39.8
C07p15250 Brassica napus HOM05D008078 ORTHO05D010263 1.1e-18 97.8 146 42.5
CARHR287590 Cardamine hirsuta HOM05D008078 ORTHO05D010263 4.3e-18 95.9 132 40.9
BraA04t18279Z Brassica rapa HOM05D008078 ORTHO05D010263 1.2e-17 94.4 137 42.3
Aa31LG5G18290 Aethionema arabicum HOM05D008078 ORTHO05D010263 1.6e-17 94.0 289 30.1
BcaC02g07605 Brassica carinata HOM05D008078 ORTHO05D010263 4.7e-17 92.4 368 26.4
Aa31LG5G21520 Aethionema arabicum HOM05D008078 ORTHO05D010263 1.1e-16 91.3 310 30.6
AL7G47900 Arabidopsis lyrata HOM05D008078 ORTHO05D010263 2.3e-16 90.1 128 43.0
BcaC08g44490 Brassica carinata HOM05D008078 ORTHO05D010263 8.9e-16 88.2 201 32.8
C06p19410 Brassica napus HOM05D008078 ORTHO05D010263 8.9e-16 88.2 201 32.8
Aa31LG5G23640 Aethionema arabicum HOM05D008078 ORTHO05D010263 3.4e-15 86.3 293 28.7
BolC6t37137H Brassica oleracea HOM05D008078 ORTHO05D010263 5.8e-15 85.5 201 32.3
BcaB06g27085 Brassica carinata HOM05D008078 ORTHO05D010263 2.9e-14 83.2 103 49.5
AT2G36340 Arabidopsis thaliana HOM05D008078 ORTHO05D010263 6.4e-14 82.0 409 24.7
AT5G41530 Arabidopsis thaliana HOM05D008078 ORTHO05D010263 3.5e-12 76.3 90 45.6
Sp7g05370 Schrenkiella parvula HOM05D008078 ORTHO05D000614 3.5e-12 76.3 216 28.2
SpUn0053_0010 Schrenkiella parvula HOM05D008078 ORTHO05D000614 3.5e-12 76.3 216 28.2
Aa31LG5G23590 Aethionema arabicum HOM05D008078 ORTHO05D010263 6.0e-12 75.5 289 26.0
Carub.0004s0544 Capsella rubella HOM05D008078 ORTHO05D010263 6.0e-12 75.5 241 26.6
Carub.0003s0729 Capsella rubella HOM05D008078 ORTHO05D010263 1.0e-11 74.7 317 27.1
AT4G00270 Arabidopsis thaliana HOM05D008078 ORTHO05D010263 1.7e-11 73.9 235 28.1
A03p67300 Brassica napus HOM05D008078 ORTHO05D010263 3.0e-11 73.2 200 29.0
BraA01t02743Z Brassica rapa HOM05D008078 ORTHO05D010263 3.0e-11 73.2 200 29.0
CARHR082420 Cardamine hirsuta HOM05D008078 ORTHO05D010263 3.0e-11 73.2 358 25.7
AL6G24965 Arabidopsis lyrata HOM05D000825 ORTHO05D003684 5.1e-11 72.4 252 27.0
BcaB02g07925 Brassica carinata HOM05D001331 ORTHO05D001157 5.1e-11 72.4 194 27.8
BcaB06g28932 Brassica carinata HOM05D008078 ORTHO05D010263 6.6e-11 72.0 106 37.7
BolC6t37138H Brassica oleracea HOM05D008078 ORTHO05D010263 1.1e-10 71.2 200 27.5
BraA07t28789Z Brassica rapa HOM05D008078 ORTHO05D010263 4.3e-10 69.3 214 26.6
AT3G07710 Arabidopsis thaliana HOM05D008078 ORTHO05D010263 1.2e-09 67.8 108 39.8
A07p09980 Brassica napus HOM05D008078 ORTHO05D010263 1.2e-09 67.8 231 26.8
BcaC08g44491 Brassica carinata HOM05D008078 ORTHO05D010263 2.1e-09 67.0 200 27.0
C06p19420 Brassica napus HOM05D008078 ORTHO05D010263 2.1e-09 67.0 200 27.0
C07p15240 Brassica napus HOM05D008078 ORTHO05D010263 3.6e-09 66.2 202 28.2
BcaC06g35504 Brassica carinata HOM05D008078 ORTHO05D010263 4.7e-09 65.9 202 27.2
CARHR289160 Cardamine hirsuta HOM05D008078 ORTHO05D010263 4.7e-09 65.9 82 42.7
Thhalv10027890m.g Eutrema salsugineum HOM05D008078 ORTHO05D010263 1.4e-08 64.3 217 24.4
CARHR199060 Cardamine hirsuta HOM05D008078 ORTHO05D010263 1.8e-08 63.9 223 26.5
AL3G19070 Arabidopsis lyrata HOM05D008078 ORTHO05D010263 4.0e-08 62.8 77 48.1
AT5G14280 Arabidopsis thaliana HOM05D008078 ORTHO05D010263 1.2e-07 61.2 237 24.1
Sp7g05720 Schrenkiella parvula HOM05D000538 ORTHO05D010263 2.6e-07 60.1 82 42.7
BcaB07g31821 Brassica carinata HOM05D008078 ORTHO05D010263 5.8e-07 58.9 211 26.5
AL4G17170 Arabidopsis lyrata HOM05D008078 ORTHO05D010263 2.2e-06 57.0 77 44.2
BcaB02g07926 Brassica carinata HOM05D008078 ORTHO05D010263 3.7e-06 56.2 109 35.8
Lalb_Chr05g0228411 Lupinus albus HOM05D000538 ORTHO05D000614 3.7e-06 56.2 263 25.1
BraA05t20537Z Brassica rapa HOM05D008078 ORTHO05D010263 8.4e-06 55.1 224 25.9
Thhalv10027771m.g Eutrema salsugineum HOM05D008078 ORTHO05D000614 8.4e-06 55.1 87 39.1


User provided reference genes

Program Settings