Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G47350 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 4.1e-23 110.5 56 100.0
Carub.0001s3741 Capsella rubella HOM05D000353 ORTHO05D000174 1.1e-10 69.3 44 68.2
Carub.0005s2382 Capsella rubella HOM05D000353 ORTHO05D000174 1.1e-10 69.3 44 68.2
Carub.0001s3651 Capsella rubella HOM05D000353 ORTHO05D000174 1.8e-10 68.6 42 66.7
Carub.0003s3392 Capsella rubella HOM05D000353 ORTHO05D000174 2.3e-10 68.2 40 72.5
Carub.0001s3383 Capsella rubella HOM05D000353 ORTHO05D000174 6.8e-10 66.6 41 70.7
Carub.0007s3247 Capsella rubella HOM05D000353 ORTHO05D000174 1.5e-09 65.5 40 67.5
Carub.0007s3522 Capsella rubella HOM05D000353 ORTHO05D000174 1.7e-08 62.0 41 68.3
BcaC03g17220 Brassica carinata HOM05D000353 ORTHO05D000174 6.4e-08 60.1 52 51.9
C04p18020 Brassica napus HOM05D000353 ORTHO05D000174 6.4e-08 60.1 46 56.5
BolC4t23348H Brassica oleracea HOM05D000353 ORTHO05D000174 6.4e-08 60.1 46 56.5
BolC7t46221H Brassica oleracea HOM05D000353 ORTHO05D000174 6.4e-08 60.1 45 60.0
BraA06t27230Z Brassica rapa HOM05D000353 ORTHO05D000174 6.4e-08 60.1 47 57.4
BolC5t32910H Brassica oleracea HOM05D000353 ORTHO05D000174 8.3e-08 59.7 47 57.4
BolC8t51320H Brassica oleracea HOM05D000353 ORTHO05D000174 8.3e-08 59.7 47 57.4
BraA02t05389Z Brassica rapa HOM05D000353 ORTHO05D000174 8.3e-08 59.7 47 57.4
BraA10t43582Z Brassica rapa HOM05D000353 ORTHO05D000174 8.3e-08 59.7 47 57.4
A06p43450 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-07 59.3 42 61.9
C02p51500 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-07 59.3 47 55.3
C04p31750 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-07 59.3 43 60.5
C04p55780 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-07 59.3 42 61.9
C09p40850 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-07 59.3 42 61.9
BolC2t11238H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-07 59.3 47 55.3
BolC4t24724H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-07 59.3 43 60.5
BolC4t27105H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-07 59.3 42 61.9
BolC9t56965H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-07 59.3 42 61.9
BraA03t15520Z Brassica rapa HOM05D000353 ORTHO05D000174 1.1e-07 59.3 52 53.8
C03p65000 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-07 58.9 41 56.1
C09p29310 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-07 58.9 43 58.1
BolC3t18759H Brassica oleracea HOM05D000353 ORTHO05D000174 1.4e-07 58.9 41 56.1
BraA10t42806Z Brassica rapa HOM05D000353 ORTHO05D000174 1.4e-07 58.9 41 56.1
BcaC07g40740 Brassica carinata HOM05D000353 ORTHO05D000174 1.9e-07 58.5 42 61.9
BcaC08g44288 Brassica carinata HOM05D000353 ORTHO05D000174 1.9e-07 58.5 42 61.9
A02p04260 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-07 58.5 42 61.9
C02p55620 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-07 58.5 42 61.9
C03p68940 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-07 58.5 42 61.9
C03p86410 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-07 58.5 42 59.5
C05p41810 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-07 58.5 42 61.9
C06p17130 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-07 58.5 42 61.9
C07p41190 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-07 58.5 42 59.5
C09p45610 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-07 58.5 42 59.5
BolC3t20933H Brassica oleracea HOM05D000353 ORTHO05D000174 1.9e-07 58.5 42 59.5
BolC8t50650H Brassica oleracea HOM05D000353 ORTHO05D000174 1.9e-07 58.5 42 59.5
BcaC09g52243 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-07 58.2 41 53.7
A03p68730 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-07 58.2 45 51.1
A05p24020 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-07 58.2 45 51.1
A06p16970 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-07 58.2 41 53.7
A10p00020 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-07 58.2 45 51.1
C04p06370 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-07 58.2 41 53.7
C04p31400 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-07 58.2 41 53.7
C06p01070 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-07 58.2 41 53.7
C06p10170 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-07 58.2 43 55.8
BolC4t22260H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-07 58.2 41 53.7
BraA04t16943Z Brassica rapa HOM05D000353 ORTHO05D000174 2.4e-07 58.2 45 51.1
BraA06t24806Z Brassica rapa HOM05D000353 ORTHO05D000174 2.4e-07 58.2 41 53.7
BcaC01g06268 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-07 57.8 45 55.6
BolC7t42401H Brassica oleracea HOM05D000353 ORTHO05D021743 3.2e-07 57.8 44 50.0
BraA01t02637Z Brassica rapa HOM05D000353 ORTHO05D000174 3.2e-07 57.8 47 48.9
BraA02t07226Z Brassica rapa HOM05D000353 ORTHO05D000174 3.2e-07 57.8 46 54.3
BraA09t38076Z Brassica rapa HOM05D000353 ORTHO05D000174 3.2e-07 57.8 47 48.9
BraA09t38700Z Brassica rapa HOM05D000353 ORTHO05D000174 3.2e-07 57.8 47 48.9
A03p64530 Brassica napus HOM05D000353 ORTHO05D000174 4.1e-07 57.4 42 57.1
C01p30610 Brassica napus HOM05D000353 ORTHO05D000174 4.1e-07 57.4 44 52.3
C07p21610 Brassica napus HOM05D000353 ORTHO05D000174 4.1e-07 57.4 42 57.1
BolC2t10477H Brassica oleracea HOM05D000353 ORTHO05D000174 4.1e-07 57.4 44 50.0
BolC5t33903H Brassica oleracea HOM05D000353 ORTHO05D000174 4.1e-07 57.4 41 58.5
BolC9t57836H Brassica oleracea HOM05D000353 ORTHO05D000174 4.1e-07 57.4 44 52.3
Thhalv10003082m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.1e-07 57.4 41 58.5
BcaC01g02110 Brassica carinata HOM05D000353 ORTHO05D000174 5.4e-07 57.0 45 55.6
C03p61110 Brassica napus HOM05D000353 ORTHO05D000174 5.4e-07 57.0 44 52.3
BolC3t18374H Brassica oleracea HOM05D000353 ORTHO05D000174 5.4e-07 57.0 44 52.3
BolC4t23836H Brassica oleracea HOM05D000353 ORTHO05D000174 5.4e-07 57.0 45 55.6
BcaB03g16606 Brassica carinata HOM05D000353 ORTHO05D000174 7.0e-07 56.6 38 60.5
BcaB06g27468 Brassica carinata HOM05D000353 ORTHO05D000174 7.0e-07 56.6 41 48.8
BcaC03g18563 Brassica carinata HOM05D000353 ORTHO05D000174 7.0e-07 56.6 38 60.5
BcaC05g27946 Brassica carinata HOM05D000353 ORTHO05D000174 7.0e-07 56.6 38 60.5
C02p13860 Brassica napus HOM05D000353 ORTHO05D000174 7.0e-07 56.6 38 60.5
C09p53850 Brassica napus HOM05D000353 ORTHO05D000174 7.0e-07 56.6 41 58.5
BolC2t07505H Brassica oleracea HOM05D000353 ORTHO05D000174 7.0e-07 56.6 38 60.5
BolC4t25685H Brassica oleracea HOM05D000353 ORTHO05D000174 7.0e-07 56.6 41 58.5
BolC6t38135H Brassica oleracea HOM05D000353 ORTHO05D000174 7.0e-07 56.6 41 58.5
A04p07180 Brassica napus HOM05D000353 ORTHO05D000174 9.2e-07 56.2 44 50.0
A07p12890 Brassica napus HOM05D000353 ORTHO05D000174 9.2e-07 56.2 44 50.0
C04p35020 Brassica napus HOM05D000353 ORTHO05D000174 9.2e-07 56.2 43 58.1
C04p43260 Brassica napus HOM05D000353 ORTHO05D000174 9.2e-07 56.2 44 52.3
C07p13750 Brassica napus HOM05D000353 ORTHO05D000174 9.2e-07 56.2 42 57.1
BolC2t10482H Brassica oleracea HOM05D000353 ORTHO05D000174 9.2e-07 56.2 44 50.0
BolC4t25058H Brassica oleracea HOM05D000353 ORTHO05D000174 9.2e-07 56.2 43 58.1
BolC6t36094H Brassica oleracea HOM05D000353 ORTHO05D000174 9.2e-07 56.2 43 55.8
BolC6t37727H Brassica oleracea HOM05D000353 ORTHO05D000174 9.2e-07 56.2 45 55.6
BolC8t47083H Brassica oleracea HOM05D000353 ORTHO05D000174 9.2e-07 56.2 45 55.6
BraA09t38906Z Brassica rapa HOM05D000353 ORTHO05D000174 9.2e-07 56.2 38 60.5
C02p07180 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-06 55.8 44 50.0
C03p78650 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-06 55.8 43 51.2
C04p68510 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-06 55.8 45 55.6
C05p30670 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-06 55.8 41 48.8
BolC2t06651H Brassica oleracea HOM05D000353 ORTHO05D000174 1.2e-06 55.8 44 50.0
BolC3t18786H Brassica oleracea HOM05D000353 ORTHO05D000174 1.2e-06 55.8 41 48.8
BolC3t19149H Brassica oleracea HOM05D000353 ORTHO05D000174 1.2e-06 55.8 43 55.8
BolC3t20219H Brassica oleracea HOM05D000353 ORTHO05D000174 1.2e-06 55.8 49 49.0
BcaC06g33917 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-06 55.5 43 55.8
BcaC08g44124 Brassica carinata HOM05D000353 ORTHO05D027748 1.6e-06 55.5 52 44.2
BcaC09g49970 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-06 55.5 41 51.2
BcaNung06299 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-06 55.5 43 55.8
C07p09410 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-06 55.5 42 59.5
C07p35300 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-06 55.5 43 55.8
BolC1t02998H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-06 55.5 41 51.2
BolC2t09611H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-06 55.5 45 55.6
BolC3t19091H Brassica oleracea HOM05D000096 ORTHO05D000045 1.6e-06 55.5 42 57.1
BolC5t32432H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-06 55.5 44 47.7
BolC5t32434H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-06 55.5 44 47.7
BolC7t41363H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-06 55.5 42 59.5
Carub.0001s3517 Capsella rubella HOM05D000353 ORTHO05D000174 1.6e-06 55.5 45 48.9
A03p68330 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-06 55.1 41 51.2
C03p81980 Brassica napus HOM05D000353 ORTHO05D024552 2.1e-06 55.1 41 56.1
C07p18910 Brassica napus HOM05D000353 ORTHO05D021743 2.1e-06 55.1 44 47.7
BcaC04g20811 Brassica carinata HOM05D000353 ORTHO05D000174 2.7e-06 54.7 41 51.2
BcaC08g44937 Brassica carinata HOM05D000353 ORTHO05D000174 2.7e-06 54.7 42 57.1
A02p20550 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-06 54.7 42 57.1
C02p21680 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-06 54.7 42 57.1
C02p49720 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-06 54.7 44 47.7
C02p58450 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-06 54.7 38 57.9
C03p57800 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-06 54.7 43 51.2
C04p19430 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-06 54.7 46 52.2
C06p25640 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-06 54.7 42 57.1
C07p57540 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-06 54.7 45 55.6
C08p14630 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-06 54.7 41 51.2
BolC1t02466H Brassica oleracea HOM05D000096 ORTHO05D042267 2.7e-06 54.7 42 54.8
BolC9t56755H Brassica oleracea HOM05D000353 ORTHO05D000174 2.7e-06 54.7 45 46.7
BraA04t17229Z Brassica rapa HOM05D000353 ORTHO05D000174 2.7e-06 54.7 42 52.4
BcaC01g00941 Brassica carinata HOM05D000353 ORTHO05D000174 3.5e-06 54.3 45 53.3
BcaC05g27705 Brassica carinata HOM05D000353 ORTHO05D000174 3.5e-06 54.3 50 42.0
BcaNung00522 Brassica carinata HOM05D000353 ORTHO05D000174 3.5e-06 54.3 41 58.5
A10p02600 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-06 54.3 43 48.8
C01p17330 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-06 54.3 38 57.9
C02p32960 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-06 54.3 38 57.9
C05p54930 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-06 54.3 44 52.3
C06p11830 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-06 54.3 45 53.3
BolC1t00815H Brassica oleracea HOM05D000353 ORTHO05D000174 3.5e-06 54.3 45 48.9
BolC1t01673H Brassica oleracea HOM05D000353 ORTHO05D000174 3.5e-06 54.3 38 57.9
BolC5t34161H Brassica oleracea HOM05D000353 ORTHO05D000174 3.5e-06 54.3 44 52.3
BraA05t20037Z Brassica rapa HOM05D000353 ORTHO05D000174 3.5e-06 54.3 44 54.5
BraA08t32663Z Brassica rapa HOM05D000353 ORTHO05D000174 3.5e-06 54.3 44 54.5
A10p31040 Brassica napus HOM05D000353 ORTHO05D000174 4.6e-06 53.9 40 50.0
C04p16570 Brassica napus HOM05D000353 ORTHO05D000174 4.6e-06 53.9 40 50.0
C05p33950 Brassica napus HOM05D000353 ORTHO05D000174 4.6e-06 53.9 40 50.0
C09p43380 Brassica napus HOM05D000353 ORTHO05D000174 4.6e-06 53.9 43 51.2
BolC2t08345H Brassica oleracea HOM05D000353 ORTHO05D000174 4.6e-06 53.9 40 50.0
BolC7t45258H Brassica oleracea HOM05D000353 ORTHO05D000174 4.6e-06 53.9 40 50.0
BolC9t57222H Brassica oleracea HOM05D000353 ORTHO05D000174 4.6e-06 53.9 43 51.2
Thhalv10029510m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.6e-06 53.9 41 53.7
BcaC02g10189 Brassica carinata HOM05D000353 ORTHO05D000174 6.0e-06 53.5 42 57.1
BcaC05g26489 Brassica carinata HOM05D000353 ORTHO05D000174 6.0e-06 53.5 40 52.5
BcaC09g50793 Brassica carinata HOM05D000353 ORTHO05D000174 6.0e-06 53.5 43 48.8
C09p27940 Brassica napus HOM05D000353 ORTHO05D000174 6.0e-06 53.5 38 57.9
C09p58500 Brassica napus HOM05D000096 ORTHO05D000045 6.0e-06 53.5 46 54.3
BolC5t34379H Brassica oleracea HOM05D000096 ORTHO05D014489 6.0e-06 53.5 45 51.1
BolC7t41571H Brassica oleracea HOM05D000353 ORTHO05D000174 6.0e-06 53.5 38 52.6
BraA02t07160Z Brassica rapa HOM05D000353 ORTHO05D000174 6.0e-06 53.5 38 47.4
Carub.0008s0754 Capsella rubella HOM05D000353 ORTHO05D000174 6.0e-06 53.5 46 52.2
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 7.8e-06 53.1 40 57.5
BcaC02g07867 Brassica carinata HOM05D000353 ORTHO05D000174 7.8e-06 53.1 42 45.2
BcaC04g19502 Brassica carinata HOM05D000353 ORTHO05D000174 7.8e-06 53.1 42 45.2
BcaC05g28968 Brassica carinata HOM05D000353 ORTHO05D000174 7.8e-06 53.1 35 57.1
A07p05190 Brassica napus HOM05D000353 ORTHO05D000174 7.8e-06 53.1 35 57.1
A07p20360 Brassica napus HOM05D000353 ORTHO05D000174 7.8e-06 53.1 38 57.9
A09p38110 Brassica napus HOM05D000353 ORTHO05D000174 7.8e-06 53.1 41 53.7
C01p25140 Brassica napus HOM05D000353 ORTHO05D042267 7.8e-06 53.1 42 52.4
BraA08t33914Z Brassica rapa HOM05D000353 ORTHO05D000174 7.8e-06 53.1 45 48.9


User provided reference genes

Program Settings