Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G46890 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 2.1e-75 285.4 129 100.0
EL10Ac4g08499 Beta vulgaris HOM05D000023 ORTHO05D000014 4.0e-21 105.1 119 46.2
BolC9t53194H Brassica oleracea HOM05D000023 ORTHO05D000014 4.0e-21 105.1 119 48.7
BraA06t27742Z Brassica rapa HOM05D000023 ORTHO05D000014 4.0e-21 105.1 119 48.7
Hma1.2p1_2277F.1_g318670 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.4e-20 102.1 115 45.2
Hma1.2p1_0490F.1_g164210 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-19 100.1 115 44.3
C02p50440 Brassica napus HOM05D000023 ORTHO05D000014 1.1e-18 97.1 116 46.6
THA.LOC104820419 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 1.1e-18 97.1 114 47.4
EL10Ac8g19642 Beta vulgaris HOM05D000023 ORTHO05D000014 2.4e-18 95.9 69 60.9
BolC3t16229H Brassica oleracea HOM05D000023 ORTHO05D000014 3.2e-18 95.5 116 45.7
BcaC08g44948 Brassica carinata HOM05D000023 ORTHO05D000014 4.1e-18 95.1 116 46.6
C06p25790 Brassica napus HOM05D000023 ORTHO05D000014 4.1e-18 95.1 116 46.6
BraA09t37417Z Brassica rapa HOM05D000023 ORTHO05D000014 4.1e-18 95.1 116 45.7
HanXRQChr07g0186221 Helianthus annuus HOM05D000023 ORTHO05D000014 4.1e-18 95.1 114 45.6
BcaC01g00960 Brassica carinata HOM05D000023 ORTHO05D000014 1.2e-17 93.6 116 46.6
A06p21240 Brassica napus HOM05D000554 ORTHO05D011030 2.0e-17 92.8 116 44.8
A01p38030 Brassica napus HOM05D000023 ORTHO05D000014 3.5e-17 92.0 116 44.0
BolC9t57982H Brassica oleracea HOM05D000023 ORTHO05D000014 5.9e-17 91.3 116 44.0
C07p40300 Brassica napus HOM05D000023 ORTHO05D000014 7.8e-17 90.9 116 45.7
BolC2t11123H Brassica oleracea HOM05D000023 ORTHO05D000014 7.8e-17 90.9 120 44.2
BolC2t12125H Brassica oleracea HOM05D000023 ORTHO05D000014 7.8e-17 90.9 120 44.2
Hund10515 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.0e-16 90.5 128 43.0
Hund18264 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.0e-16 90.5 128 43.0
Hund11026 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-16 89.7 128 42.2
Hund04838 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.3e-16 89.4 128 43.0
BolC6t37741H Brassica oleracea HOM05D000023 ORTHO05D000014 3.0e-16 89.0 100 48.0
Hund13150 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.9e-16 88.6 126 41.3
BcaB08g36197 Brassica carinata HOM05D000023 ORTHO05D000014 6.6e-16 87.8 116 44.8
Hund24696 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.6e-16 87.4 128 42.2
A08p11410 Brassica napus HOM05D000023 ORTHO05D000014 1.1e-15 87.0 99 47.5
Hund05171 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.5e-15 86.7 130 41.5
Hund15138 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.5e-15 86.7 125 42.4
Hund22686 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.5e-15 86.7 125 42.4
Hund01251 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.9e-15 86.3 129 38.8
Hund00488 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-15 85.9 125 42.4
Hund04194 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-15 85.9 125 42.4
Hund10386 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-15 85.9 125 42.4
Hund22984 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-15 85.9 125 42.4
Hund23411 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-15 85.9 125 42.4
Hund25526 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-15 85.9 125 42.4
Hund26626 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-15 85.9 125 42.4
Hund30522 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-15 85.9 125 42.4
Hund31071 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-15 85.9 125 42.4
Hund05820 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.3e-15 85.5 92 47.8
Hund15093 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.3e-15 85.5 126 42.9
Hund24914 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.3e-15 85.1 125 41.6
A09p32160 Brassica napus HOM05D000023 ORTHO05D000014 7.3e-15 84.3 104 47.1
BraA09t38762Z Brassica rapa HOM05D000023 ORTHO05D000014 7.3e-15 84.3 104 47.1
Hund06285 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.3e-15 84.3 125 40.0
Hund11626 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.3e-15 84.3 127 40.9
Hund12079 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.3e-15 84.3 125 41.6
Hund23957 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.3e-15 84.3 125 41.6
AT1G36095 Arabidopsis thaliana HOM05D000023 ORTHO05D000014 9.5e-15 84.0 75 48.0
Hund14796 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.2e-14 83.6 128 38.3
Hund04442 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-14 83.2 128 37.5
Hund14805 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-14 83.2 125 41.6
Hund20085 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-14 83.2 125 41.6
Hund31325 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-14 83.2 125 41.6
Hund18176 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.8e-14 82.4 125 40.8
Hund31004 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.8e-14 82.4 128 40.6
Sopen10g005310 Solanum pennellii HOM05D000023 ORTHO05D000014 2.8e-14 82.4 123 43.1
Sopen10g007400 Solanum pennellii HOM05D000023 ORTHO05D000014 2.8e-14 82.4 123 43.1
C09p51190 Brassica napus HOM05D000023 ORTHO05D000014 3.6e-14 82.0 116 42.2
AL2G12480 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 8.0e-14 80.9 42 90.5
A07p03820 Brassica napus HOM05D000023 ORTHO05D000014 8.0e-14 80.9 100 47.0
Sopen01g050040 Solanum pennellii HOM05D000023 ORTHO05D000014 8.0e-14 80.9 123 43.1
Hund13497 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.1e-13 80.5 125 40.8
Hund24099 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.8e-13 79.7 128 38.3
MSTRG.23368 Avicennia marina HOM05D000023 ORTHO05D000014 2.3e-13 79.3 117 39.3
A05p26100 Brassica napus HOM05D000023 ORTHO05D000014 4.0e-13 78.6 116 40.5
CSS0005925 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.8e-13 77.8 77 48.1
Hund04191 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.8e-13 77.8 125 40.0
Hund14515 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.8e-13 77.8 126 38.1
CSS0049915 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-12 77.0 126 32.5
BcaC02g10465 Brassica carinata HOM05D000023 ORTHO05D000014 1.5e-12 76.6 60 58.3
QL02p096245 Quercus lobata HOM05D000023 ORTHO05D000014 1.5e-12 76.6 108 41.7
QL10p011117 Quercus lobata HOM05D000023 ORTHO05D000014 1.5e-12 76.6 108 41.7
Sopen01g010490 Solanum pennellii HOM05D000023 ORTHO05D000014 7.5e-12 74.3 125 41.6
MELO3C022886.2 Cucumis melo HOM05D000023 ORTHO05D002750 3.7e-11 72.0 103 40.8
BraA06t25311Z Brassica rapa HOM05D000023 ORTHO05D000014 4.9e-11 71.6 116 37.9
QL04p080373 Quercus lobata HOM05D000023 ORTHO05D000014 6.4e-11 71.2 108 40.7
Sed0008376 Sechium edule HOM05D000023 ORTHO05D000014 6.4e-11 71.2 71 49.3
PGSC0003DMG400044990 Solanum tuberosum HOM05D009083 ORTHO05D010901 2.4e-10 69.3 70 48.6
BcaC07g37282 Brassica carinata HOM05D026077 ORTHO05D000014 4.1e-10 68.6 52 55.8
Thhalv10012187m.g Eutrema salsugineum HOM05D026077 ORTHO05D032958 9.2e-10 67.4 118 38.1
Hma1.2p1_0988F.1_g244690 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.2e-09 67.0 94 41.5
Nn1g01508 Nelumbo nucifera HOM05D000023 ORTHO05D012305 1.2e-09 67.0 70 48.6
BcaB03g15143 Brassica carinata HOM05D000023 ORTHO05D000014 1.6e-09 66.6 96 42.7
PSO170G4702 Papaver somniferum HOM05D000023 ORTHO05D000014 1.6e-09 66.6 129 33.3
SGA_v2.0_scaffold327G48774 Striga asiatica HOM05D000023 ORTHO05D000014 1.6e-09 66.6 100 38.0
SGA_v2.0_scaffold17G08089 Striga asiatica HOM05D000023 ORTHO05D000014 2.0e-09 66.2 124 36.3
BcaC05g26071 Brassica carinata HOM05D000023 ORTHO05D000014 2.7e-09 65.9 66 48.5
BolC5t30751H Brassica oleracea HOM05D000023 ORTHO05D000014 2.7e-09 65.9 68 50.0
SGA_v2.0_scaffold281G46900 Striga asiatica HOM05D000023 ORTHO05D000014 3.5e-09 65.5 129 35.7
BcaC09g49277 Brassica carinata HOM05D000023 ORTHO05D000014 1.0e-08 63.9 115 39.1
SHI36418 Sapria himalayana HOM05D000023 ORTHO05D000014 1.0e-08 63.9 84 45.2
C03p28870 Brassica napus HOM05D000023 ORTHO05D000014 1.7e-08 63.2 73 42.5
SHI16918 Sapria himalayana HOM05D003924 ORTHO05D005216 1.7e-08 63.2 51 54.9
Hund15523 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.3e-08 62.8 100 40.0
Hund20670 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.3e-08 62.8 58 48.3
Hund22426 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.3e-08 62.8 100 40.0
CSS0017113 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.0e-08 62.4 109 31.2
Sopen07g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-08 62.4 123 34.1
QL11p007092 Quercus lobata HOM05D000412 ORTHO05D000429 3.9e-08 62.0 56 44.6
SHI30372 Sapria himalayana HOM05D000023 ORTHO05D000014 6.6e-08 61.2 51 54.9
SHI03890 Sapria himalayana HOM05D000023 ORTHO05D000014 8.6e-08 60.8 129 35.7
SHI21514 Sapria himalayana HOM05D000023 ORTHO05D000014 8.6e-08 60.8 87 42.5
Nn2g14678 Nelumbo nucifera HOM05D000023 ORTHO05D000014 4.3e-07 58.5 66 45.5
Nitab4.5_0002586g0050 Nicotiana tabacum HOM05D000023 ORTHO05D002750 7.3e-07 57.8 82 39.0
CSS0016050 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.5e-07 57.4 71 39.4
CSS0026234 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-06 57.0 106 34.9
Aqoxy5G01955 Aquilegia oxysepala HOM05D009083 ORTHO05D010901 1.6e-06 56.6 118 34.7
Glyma.20G072800 Glycine max HOM05D000023 ORTHO05D000014 1.6e-06 56.6 127 32.3
PSO339G6217 Papaver somniferum HOM05D000023 ORTHO05D000014 1.6e-06 56.6 99 31.3
Nitab4.5_0000502g0170 Nicotiana tabacum HOM05D000023 ORTHO05D002750 2.1e-06 56.2 55 43.6
SHI12076 Sapria himalayana HOM05D007023 ORTHO05D008684 2.1e-06 56.2 116 32.8
SHI25354 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-06 56.2 111 36.0
SHI32655 Sapria himalayana HOM05D000023 ORTHO05D024958 2.8e-06 55.8 95 40.0
Glyma.03G080400 Glycine max HOM05D000023 ORTHO05D000014 3.6e-06 55.5 112 33.0
SHI07783 Sapria himalayana HOM05D000023 ORTHO05D000014 4.7e-06 55.1 40 60.0
Glyma.04G117600 Glycine max HOM05D000023 ORTHO05D000014 6.2e-06 54.7 112 33.0
SHI25011 Sapria himalayana HOM05D000023 ORTHO05D000014 6.2e-06 54.7 93 34.4
Glyma.01G121600 Glycine max HOM05D000023 ORTHO05D000014 8.1e-06 54.3 127 32.3
Glyma.02G159600 Glycine max HOM05D000023 ORTHO05D000014 8.1e-06 54.3 127 32.3
Glyma.20G074600 Glycine max HOM05D000023 ORTHO05D000014 8.1e-06 54.3 127 32.3


User provided reference genes

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