Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 0.0e+00 1258.4 624 100.0
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.0e-311 1071.2 611 87.6
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 1.4e-257 892.9 624 72.3
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.5e-238 828.9 622 67.2
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 5.7e-206 721.5 623 60.0
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.6e-200 703.4 643 56.8
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.1e-196 688.7 619 56.5
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 3.2e-193 679.1 617 56.7
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 1.0e-191 674.1 619 57.0
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.3e-183 646.4 614 55.9
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.7e-170 603.6 613 52.0
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.3e-169 599.4 613 50.4
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 3.3e-169 599.4 610 52.6
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 4.7e-168 595.5 605 52.7
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 8.0e-168 594.7 621 49.0
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 1.4e-167 594.0 605 52.6
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 3.0e-167 592.8 604 52.3
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.2e-167 592.0 617 50.4
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.2e-167 592.0 613 50.9
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 4.4e-166 589.0 582 56.0
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.4e-164 583.9 620 50.8
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 1.4e-164 583.9 604 52.0
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 1.2e-160 570.9 616 50.0
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 6.1e-160 568.5 620 49.8
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.0e-159 565.8 605 49.6
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 9.8e-158 561.2 603 50.2
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.9e-154 549.3 615 49.8
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.9e-153 547.0 603 48.4
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.6e-152 543.9 616 49.5
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.6e-152 543.9 601 48.6
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.4e-151 540.8 618 49.5
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.4e-151 540.8 619 48.9
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.3e-151 540.0 599 48.4
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.2e-150 537.7 619 48.6
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 6.4e-149 531.9 621 48.5
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 7.1e-148 528.5 586 47.6
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 9.2e-148 528.1 596 46.6
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.9e-146 522.7 616 47.9
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 1.1e-143 514.6 610 47.5
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 4.0e-143 512.7 610 47.2
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 1.5e-142 510.8 595 46.6
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.2e-141 506.9 616 47.9
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 2.9e-141 506.5 610 46.7
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 7.1e-140 501.9 610 46.6
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.1e-139 500.4 586 49.7
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 6.6e-138 495.4 598 46.2
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 8.6e-138 495.0 621 46.7
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 1.1e-137 494.6 615 45.5
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 1.9e-137 493.8 615 45.5
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 1.4e-135 487.6 616 45.0
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 2.2e-133 480.3 607 45.8
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.9e-133 479.2 572 47.0
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 8.4e-133 478.4 603 44.8
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 8.4e-133 478.4 603 44.8
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 2.4e-132 476.9 603 44.8
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 4.6e-131 472.6 607 45.3
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 7.8e-131 471.9 657 41.6
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 1.0e-130 471.5 608 46.2
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.3e-130 470.3 621 44.8
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 3.9e-130 469.5 605 46.3
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 6.6e-130 468.8 602 44.7
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 6.6e-130 468.8 605 44.0
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.9e-114 416.4 593 42.0
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.6e-112 411.0 626 41.7
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.8e-112 410.2 596 42.1
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.1e-111 408.3 594 41.9
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.9e-100 370.9 373 54.4
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.9e-100 370.9 373 54.4
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 4.3e-97 359.8 419 48.0
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 2.5e-76 290.8 419 40.6
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 4.7e-75 286.6 641 33.4
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 4.1e-71 273.5 296 49.0
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 2.1e-67 261.2 389 39.1
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.3e-48 198.7 172 58.7
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 8.6e-37 159.5 242 38.4
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 8.1e-35 152.9 242 37.2
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 8.9e-34 149.4 259 36.3
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 1.4e-31 142.1 196 38.8
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 4.3e-28 130.6 175 41.7
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 1.2e-27 129.0 101 57.4
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 8.1e-27 126.3 159 43.4
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 1.2e-25 122.5 96 66.7
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 2.9e-24 117.9 99 62.6
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 3.2e-23 114.4 89 66.3
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 2.3e-21 108.2 299 31.4
BolC2t07141H Brassica oleracea HOM05D007773 ORTHO05D043183 5.8e-17 93.6 97 50.5
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 9.9e-17 92.8 307 29.3
Sp5g21170 Schrenkiella parvula HOM05D012346 ORTHO05D014859 1.7e-16 92.0 322 28.0
BcaB03g15294 Brassica carinata HOM05D012346 ORTHO05D014859 1.4e-15 89.0 302 29.5
BolC6t39031H Brassica oleracea HOM05D012346 ORTHO05D014859 3.2e-15 87.8 305 28.2
AL2G23710 Arabidopsis lyrata HOM05D012346 ORTHO05D014859 4.2e-15 87.4 260 29.2
C06p39380 Brassica napus HOM05D012346 ORTHO05D014859 5.4e-15 87.0 306 28.4
Carub.0002s1208 Capsella rubella HOM05D012346 ORTHO05D014859 5.4e-15 87.0 325 28.3
BcaC08g46079 Brassica carinata HOM05D012346 ORTHO05D014859 7.1e-15 86.7 305 28.2
AL2G23620 Arabidopsis lyrata HOM05D018003 ORTHO05D018431 9.3e-15 86.3 168 35.1
AT1G66110 Arabidopsis thaliana HOM05D012346 ORTHO05D014859 2.7e-14 84.7 278 29.5
THA.LOC104825402 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 5.1e-13 80.5 102 45.1
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 6.2e-11 73.6 175 32.6
CARHR215680 Cardamine hirsuta HOM05D007773 ORTHO05D043183 1.5e-09 68.9 76 43.4
Thhalv10019694m.g Eutrema salsugineum HOM05D012346 ORTHO05D014859 2.6e-09 68.2 129 35.7
CAN.G112.9 Capsicum annuum HOM05D000846 ORTHO05D001340 1.3e-08 65.9 276 26.1
CAN.G112.4 Capsicum annuum HOM05D000846 ORTHO05D001340 1.7e-08 65.5 217 26.7
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 3.8e-08 64.3 142 31.0
CARHR057960 Cardamine hirsuta HOM05D007773 ORTHO05D018431 1.1e-07 62.8 106 33.0


User provided reference genes

Program Settings