Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 6.3e-249 864.0 553 100.0
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 4.3e-205 718.4 554 87.5
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 1.9e-197 693.0 551 77.7
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 2.1e-196 689.5 557 77.9
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 8.6e-190 667.5 549 76.1
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 9.5e-189 664.1 557 81.0
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 1.5e-186 656.8 557 80.1
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 2.4e-184 649.4 546 74.0
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 1.6e-183 646.7 557 79.5
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 1.9e-181 639.8 558 79.2
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 7.6e-178 627.9 556 80.9
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 1.0e-174 617.5 554 72.6
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 7.6e-146 521.5 552 71.7
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 2.3e-126 456.8 293 85.0
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 4.8e-108 396.0 552 61.4
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 8.3e-108 395.2 518 63.5
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 8.3e-108 395.2 540 54.3
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 4.1e-107 392.9 542 60.1
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 1.6e-106 391.0 522 62.5
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.6e-101 373.6 554 57.6
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 5.7e-101 372.5 500 55.4
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 5.7e-101 372.5 556 51.6
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 1.7e-100 370.9 549 59.0
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 4.9e-100 369.4 536 57.1
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 1.1e-99 368.2 498 55.4
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 5.4e-99 365.9 553 57.1
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 2.0e-98 364.0 499 55.7
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 5.9e-98 362.5 567 49.7
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 2.9e-97 360.1 520 52.1
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 5.0e-97 359.4 507 53.6
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 6.6e-97 359.0 498 52.2
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 4.3e-96 356.3 516 51.7
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 5.6e-96 355.9 524 52.3
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 1.6e-95 354.4 522 52.1
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 3.7e-92 343.2 559 54.4
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 7.0e-91 339.0 537 55.1
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 1.2e-90 338.2 505 52.3
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 2.7e-90 337.0 522 50.6
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 3.5e-90 336.7 478 61.3
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 3.5e-90 336.7 526 52.9
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 5.0e-89 332.8 498 53.2
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 6.6e-89 332.4 555 55.0
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 1.9e-88 330.9 497 58.8
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 1.6e-87 327.8 491 52.3
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 2.8e-87 327.0 559 55.3
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 3.6e-87 326.6 477 60.0
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 3.6e-87 326.6 557 55.3
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 4.7e-87 326.2 467 61.2
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 2.3e-86 323.9 548 54.4
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 6.8e-86 322.4 551 54.8
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 4.1e-83 313.2 563 37.7
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 1.3e-81 308.1 528 55.5
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 8.6e-81 305.4 551 54.8
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 1.9e-80 304.3 474 52.5
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 1.1e-78 298.5 508 45.5
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 1.1e-78 298.5 431 54.1
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 1.2e-77 295.0 419 51.1
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 7.5e-77 292.4 467 48.4
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 1.7e-76 291.2 496 50.8
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 6.4e-76 289.3 568 44.7
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 8.3e-76 288.9 393 61.8
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 4.1e-75 286.6 561 52.6
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.0e-73 282.0 520 47.1
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 5.1e-73 279.6 561 52.0
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 4.4e-69 266.5 486 48.8
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 3.2e-67 260.4 374 60.2
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 5.4e-67 259.6 289 51.6
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 6.0e-66 256.1 495 46.7
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 7.8e-66 255.8 502 34.1
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.0e-65 255.4 507 44.2
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 3.9e-65 253.4 467 46.0
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 6.2e-63 246.1 309 66.3
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 1.9e-59 234.6 538 40.9
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 2.4e-59 234.2 258 49.6
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 4.3e-56 223.4 340 53.8
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 1.3e-55 221.9 487 34.5
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 2.4e-54 217.6 468 43.6
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.5e-53 214.9 281 47.0
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 9.9e-53 212.2 271 43.5
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.2e-45 188.7 260 72.3
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 2.0e-45 188.0 260 72.3
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 3.4e-45 187.2 269 43.5
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 9.0e-38 162.5 182 50.5
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 2.3e-33 147.9 182 51.6
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 1.6e-31 141.7 239 59.4
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 4.1e-30 137.1 122 59.0
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 5.3e-30 136.7 98 71.4
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.2e-29 135.6 428 29.4
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 7.6e-29 132.9 180 43.9
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 5.1e-25 120.2 407 46.4
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 5.7e-24 116.7 183 39.3
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 2.8e-23 114.4 115 49.6
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 3.7e-23 114.0 117 48.7
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 6.3e-23 113.2 119 54.6
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 5.0e-20 103.6 88 55.7
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 1.2e-18 99.0 147 46.9
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 5.7e-16 90.1 143 39.2
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 9.7e-16 89.4 172 37.2
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 1.3e-15 89.0 123 42.3
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 5.3e-14 83.6 70 51.4
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 1.5e-13 82.0 196 33.7
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 3.4e-13 80.9 100 43.0
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 8.5e-12 76.3 68 51.5
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 5.5e-11 73.6 150 36.7
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 2.1e-10 71.6 285 26.0
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 2.7e-10 71.2 57 61.4
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 3.0e-09 67.8 171 25.1
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 1.1e-08 65.9 176 34.1
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 1.1e-08 65.9 62 53.2
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 1.3e-07 62.4 78 43.6
Oeu058058.1 Olea europaea HOM05D013212 ORTHO05D007954 7.0e-06 56.6 100 39.0


User provided reference genes

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