Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 0.0e+00 1199.5 613 100.0
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 7.7e-235 817.4 614 72.8
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.2e-233 812.0 614 71.5
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.1e-228 795.4 618 68.9
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 1.1e-222 776.9 610 67.9
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.7e-213 746.5 578 70.2
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.8e-213 745.0 615 65.4
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 1.5e-209 733.4 608 65.8
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 1.7e-202 709.9 618 62.9
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.7e-202 709.9 613 63.9
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.5e-201 706.8 606 63.4
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.0e-190 669.8 618 60.4
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.2e-189 666.4 619 60.4
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.4e-188 663.7 629 58.7
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.0e-187 659.8 620 59.2
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 7.8e-187 657.9 622 58.8
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 6.6e-186 654.8 614 58.3
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 7.3e-185 651.4 619 59.5
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 2.2e-181 639.8 620 56.8
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.1e-178 628.6 598 58.0
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 9.5e-177 624.4 597 59.0
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.5e-171 605.9 583 59.0
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.4e-167 593.2 610 56.4
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.8e-159 567.0 604 52.2
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 4.0e-159 565.8 606 54.0
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.9e-153 547.0 615 51.2
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.9e-153 547.0 599 51.3
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 4.2e-148 529.3 391 73.1
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 4.2e-148 529.3 391 73.1
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.2e-147 527.7 618 49.5
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 1.9e-145 520.4 612 49.5
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.6e-145 518.8 625 48.6
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 1.3e-144 517.7 612 49.5
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 1.6e-144 517.3 609 49.1
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 4.0e-143 512.7 609 49.4
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 9.0e-143 511.5 609 49.4
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 2.6e-142 510.0 612 49.2
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 2.9e-141 506.5 618 48.7
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 4.9e-141 505.8 596 49.2
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 1.9e-140 503.8 590 48.6
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.3e-138 496.9 613 48.3
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 8.7e-138 495.0 620 48.9
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 1.9e-137 493.8 665 44.4
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 2.5e-137 493.4 614 45.3
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.5e-137 493.4 624 48.2
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 3.3e-137 493.0 600 48.2
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 3.3e-137 493.0 600 48.2
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 3.3e-137 493.0 614 45.6
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 5.7e-137 492.3 644 47.7
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 7.4e-137 491.9 600 48.2
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 9.6e-137 491.5 614 45.4
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 3.7e-136 489.6 614 49.3
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 4.8e-136 489.2 596 47.8
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 1.4e-135 487.6 623 49.3
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 1.8e-135 487.3 620 48.2
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 4.1e-135 486.1 594 47.6
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 1.0e-133 481.5 614 44.5
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.5e-132 475.7 616 47.9
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 1.0e-130 471.5 612 44.3
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.3e-129 466.5 623 45.4
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 8.2e-128 461.8 612 44.8
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 6.5e-125 452.2 615 44.6
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 6.5e-125 452.2 623 44.5
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 1.8e-122 444.1 624 45.0
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.4e-119 434.5 587 44.8
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.2e-118 431.4 595 44.4
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 2.3e-114 417.2 590 43.7
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 1.6e-107 394.4 586 42.5
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 1.2e-86 325.1 412 48.3
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 5.9e-78 296.2 387 47.3
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 3.4e-73 280.4 430 40.0
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 4.4e-73 280.0 641 32.8
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.2e-64 251.1 300 50.3
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 7.8e-54 216.1 174 64.4
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 4.8e-35 153.7 308 33.4
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 5.3e-34 150.2 256 36.3
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 6.4e-32 143.3 277 35.0
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 1.3e-29 135.6 217 37.8
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 1.6e-27 128.6 315 34.6
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 4.5e-25 120.6 85 71.8
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 8.4e-24 116.3 176 40.3
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 1.4e-23 115.5 96 61.5
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 9.3e-23 112.8 160 41.9
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 7.9e-22 109.8 90 61.1
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 1.3e-19 102.4 101 47.5
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 8.5e-16 89.7 727 21.9
AT1G66110 Arabidopsis thaliana HOM05D012346 ORTHO05D014859 7.2e-15 86.7 255 31.4
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 5.1e-13 80.5 163 36.2
CARHR058090 Cardamine hirsuta HOM05D012346 ORTHO05D014859 1.1e-12 79.3 307 28.3
BolC2t07141H Brassica oleracea HOM05D007773 ORTHO05D043183 1.5e-12 79.0 89 46.1
AL2G23710 Arabidopsis lyrata HOM05D012346 ORTHO05D014859 3.3e-12 77.8 254 30.7
Carub.0002s1208 Capsella rubella HOM05D012346 ORTHO05D014859 4.8e-11 73.9 311 27.7
THA.LOC104825402 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 1.8e-10 72.0 102 42.2
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 3.1e-10 71.2 308 27.9
AL2G23620 Arabidopsis lyrata HOM05D018003 ORTHO05D018431 6.9e-10 70.1 158 33.5
BraA07t30940Z Brassica rapa HOM05D012346 ORTHO05D014859 9.1e-10 69.7 308 26.9
Sp5g21170 Schrenkiella parvula HOM05D012346 ORTHO05D014859 1.5e-09 68.9 293 28.3
C06p39380 Brassica napus HOM05D012346 ORTHO05D014859 3.4e-09 67.8 308 27.3
BcaC08g46079 Brassica carinata HOM05D012346 ORTHO05D014859 4.5e-09 67.4 307 27.4
BolC6t39031H Brassica oleracea HOM05D012346 ORTHO05D014859 1.0e-08 66.2 307 27.4
CARHR057960 Cardamine hirsuta HOM05D007773 ORTHO05D018431 4.2e-07 60.8 101 33.7
BcaB03g15294 Brassica carinata HOM05D012346 ORTHO05D014859 9.4e-07 59.7 314 27.1


User provided reference genes

Program Settings