Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 1.4e-160 569.7 308 100.0
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 2.7e-148 528.9 310 93.9
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 2.7e-140 502.3 303 90.1
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 7.8e-132 474.2 307 85.3
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 6.2e-129 464.5 306 83.3
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 2.4e-125 452.6 305 81.3
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 4.1e-125 451.8 306 81.4
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 9.2e-125 450.7 307 81.8
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 1.6e-124 449.9 306 80.7
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 1.6e-124 449.9 306 80.7
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 5.1e-123 444.9 308 80.8
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 4.2e-109 398.7 308 74.0
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 3.9e-107 392.1 322 68.6
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 7.6e-103 377.9 310 67.7
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 3.0e-99 365.9 311 66.2
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 2.1e-97 359.8 315 65.4
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 3.1e-96 355.9 307 65.1
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 2.6e-95 352.8 306 64.4
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 2.6e-95 352.8 306 64.7
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 7.6e-95 351.3 302 64.6
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 2.4e-93 346.3 311 65.3
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 2.7e-92 342.8 299 64.9
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 3.5e-92 342.4 305 63.9
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 6.0e-92 341.7 317 63.4
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 1.3e-91 340.5 305 63.6
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 6.7e-91 338.2 308 61.7
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 8.7e-91 337.8 304 64.5
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 1.1e-90 337.4 317 61.8
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 5.6e-90 335.1 315 62.2
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 1.3e-89 334.0 292 63.4
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.3e-89 334.0 312 62.2
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 1.3e-89 334.0 262 66.0
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 1.6e-89 333.6 303 63.4
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 2.1e-89 333.2 306 61.1
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 2.8e-89 332.8 299 62.5
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 8.2e-89 331.3 305 61.3
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 6.9e-88 328.2 293 62.8
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 2.0e-87 326.6 311 59.5
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 3.4e-87 325.9 309 60.5
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 1.7e-86 323.6 308 59.4
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 3.8e-86 322.4 307 58.6
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 4.9e-86 322.0 301 61.1
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 4.9e-86 322.0 312 59.3
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 4.9e-86 322.0 308 58.4
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 8.4e-86 321.2 315 61.6
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 1.9e-85 320.1 262 64.5
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 1.9e-85 320.1 313 58.8
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 3.2e-85 319.3 310 61.0
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.6e-84 317.0 306 59.2
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 2.1e-84 316.6 303 60.4
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 2.1e-84 316.6 305 60.3
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 2.1e-84 316.6 315 58.4
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 1.0e-83 314.3 311 59.5
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 3.3e-82 309.3 307 61.6
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 3.3e-82 309.3 310 58.7
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 5.7e-82 308.5 313 57.8
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.6e-81 307.0 267 63.3
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 6.3e-81 305.1 305 59.7
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 6.9e-80 301.6 248 64.1
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 1.2e-79 300.8 283 60.4
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 1.3e-78 297.4 290 58.6
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 1.7e-78 297.0 319 55.8
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 2.2e-78 296.6 298 58.7
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 2.2e-78 296.6 304 57.6
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 2.9e-78 296.2 301 57.5
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 5.0e-78 295.4 227 68.3
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 9.4e-77 291.2 271 63.5
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.1e-76 290.0 309 55.0
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 4.6e-76 288.9 300 57.3
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 3.0e-75 286.2 215 69.3
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.9e-75 285.8 318 55.0
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 6.7e-75 285.0 318 54.7
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 8.8e-75 284.6 310 56.1
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.5e-74 283.1 308 57.1
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.3e-74 282.7 315 54.6
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 1.3e-73 280.8 305 54.4
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 3.7e-73 279.3 301 54.5
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 6.3e-73 278.5 340 51.2
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 2.4e-72 276.6 211 68.2
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.0e-70 271.2 339 49.9
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 3.8e-70 269.2 355 48.5
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 5.0e-70 268.9 229 62.4
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 1.1e-69 267.7 336 50.0
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 7.9e-68 261.5 257 55.3
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 7.9e-68 261.5 319 53.0
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 2.0e-66 256.9 302 51.7
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 2.0e-66 256.9 224 64.3
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 2.6e-66 256.5 262 53.4
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 5.7e-66 255.4 309 51.8
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 4.5e-63 245.7 303 53.5
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.0e-62 244.6 247 60.3
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 6.5e-62 241.9 241 62.7
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 3.6e-60 236.1 188 66.5
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 5.7e-58 228.8 274 50.7
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 6.1e-52 208.8 222 56.3
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 8.0e-52 208.4 250 44.4
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 1.3e-49 201.1 149 69.8
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 9.1e-48 194.9 324 44.8
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 1.9e-45 187.2 192 58.9
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 2.7e-44 183.3 211 45.5
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 6.3e-41 172.2 260 38.8
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 3.8e-38 162.9 159 62.3
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 1.9e-37 160.6 135 65.9
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 1.9e-37 160.6 153 54.9
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 4.0e-35 152.9 223 38.1
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 7.0e-32 142.1 158 51.9
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 1.2e-31 141.4 120 63.3
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 3.5e-31 139.8 160 55.0
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 5.9e-31 139.0 120 64.2
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.9e-29 134.0 115 60.0
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 7.3e-29 132.1 121 58.7
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.0e-27 128.3 117 57.3
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.1e-27 126.7 234 41.9
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 6.4e-25 119.0 212 40.6
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.7e-17 94.4 112 57.1
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 1.7e-14 84.3 102 51.0
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 1.1e-13 81.6 111 49.5
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 4.9e-09 66.2 42 69.0
FAN21G2408 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.6e-07 59.7 61 59.0
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.7e-06 57.8 63 57.1
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.3e-06 57.4 146 31.5


User provided reference genes

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