Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G45610 Arabidopsis lyrata HOM05D001224 ORTHO05D000395 1.0e-47 193.0 91 100.0
AL1G45700 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 1.2e-08 63.2 79 45.6
Carub.0001s2955 Capsella rubella HOM05D000675 ORTHO05D000395 1.6e-08 62.8 63 50.8
BcaC06g35068 Brassica carinata HOM05D002776 ORTHO05D012331 4.7e-08 61.2 61 45.9
BcaB02g10769 Brassica carinata HOM05D002776 ORTHO05D012331 7.9e-08 60.5 83 41.0
AT1G31150 Arabidopsis thaliana HOM05D000675 ORTHO05D000395 1.0e-07 60.1 63 49.2
BcaC06g35526 Brassica carinata HOM05D002776 ORTHO05D012331 1.0e-07 60.1 83 41.0
BolC9t56137H Brassica oleracea HOM05D002776 ORTHO05D024276 1.0e-07 60.1 75 44.0
C07p08900 Brassica napus HOM05D001224 ORTHO05D016739 1.8e-07 59.3 75 45.3
BolC7t41304H Brassica oleracea HOM05D001224 ORTHO05D016739 1.8e-07 59.3 75 45.3
BraSC37t46113Z Brassica rapa HOM05D000675 ORTHO05D000395 3.0e-07 58.5 64 45.3
C07p06250 Brassica napus HOM05D000675 ORTHO05D000395 8.8e-07 57.0 83 41.0
BraA01t02479Z Brassica rapa HOM05D000675 ORTHO05D000395 8.8e-07 57.0 69 42.0
A07p05870 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-06 56.6 64 43.8
BolC9t59175H Brassica oleracea HOM05D001224 ORTHO05D042117 1.1e-06 56.6 64 43.8
BraA07t28367Z Brassica rapa HOM05D000675 ORTHO05D000395 1.1e-06 56.6 64 43.8
BcaC02g11120 Brassica carinata HOM05D001224 ORTHO05D010571 2.0e-06 55.8 64 43.8
BolC7t41043H Brassica oleracea HOM05D000675 ORTHO05D000395 2.0e-06 55.8 83 41.0
BraA06t25345Z Brassica rapa HOM05D000675 ORTHO05D000395 2.0e-06 55.8 69 43.5
C05p37770 Brassica napus HOM05D000675 ORTHO05D000395 2.6e-06 55.5 69 40.6
C05p36970 Brassica napus HOM05D001224 ORTHO05D024276 3.3e-06 55.1 82 40.2
C07p01190 Brassica napus HOM05D001224 ORTHO05D000395 3.3e-06 55.1 64 42.2
BolC5t32442H Brassica oleracea HOM05D001224 ORTHO05D024276 3.3e-06 55.1 82 40.2
BcaB02g11313 Brassica carinata HOM05D002776 ORTHO05D000395 4.4e-06 54.7 85 37.6
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 4.4e-06 54.7 64 40.6
C05p42010 Brassica napus HOM05D000675 ORTHO05D000395 9.7e-06 53.5 64 42.2
C05p45370 Brassica napus HOM05D000675 ORTHO05D000395 9.7e-06 53.5 64 43.8
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 9.7e-06 53.5 64 42.2


User provided reference genes

Program Settings