Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G45390 Arabidopsis lyrata HOM05D000111 ORTHO05D007071 4.2e-81 304.7 159 100.0
Carub.0007s3200 Capsella rubella HOM05D000111 ORTHO05D007071 2.1e-27 126.3 72 77.8
Carub.0007s3199 Capsella rubella HOM05D000111 ORTHO05D007071 8.4e-21 104.4 71 66.2
AT5G36680 Arabidopsis thaliana HOM05D000111 ORTHO05D007071 1.1e-20 104.0 71 66.2
AT5G36770 Arabidopsis thaliana HOM05D000111 ORTHO05D007071 1.1e-20 104.0 71 66.2
Thhalv10028179m.g Eutrema salsugineum HOM05D000111 ORTHO05D007071 3.9e-10 68.9 75 48.0
THA.LOC104815014 Tarenaya hassleriana HOM05D000111 ORTHO05D007071 9.6e-09 64.3 71 43.7
THA.LOC104815145 Tarenaya hassleriana HOM05D000111 ORTHO05D007071 2.1e-08 63.2 71 40.8
CARHR208240 Cardamine hirsuta HOM05D000111 ORTHO05D007071 5.3e-07 58.5 71 42.3
THA.LOC104815146 Tarenaya hassleriana HOM05D000111 ORTHO05D007071 1.5e-06 57.0 69 40.6
CARHR129410 Cardamine hirsuta HOM05D000111 ORTHO05D001475 3.4e-06 55.8 71 42.3
BcaC03g13280 Brassica carinata HOM05D000111 ORTHO05D007071 7.6e-06 54.7 73 42.5
A02p00190 Brassica napus HOM05D000111 ORTHO05D007071 7.6e-06 54.7 73 42.5
C02p04110 Brassica napus HOM05D000111 ORTHO05D007071 7.6e-06 54.7 73 42.5
BraA02t05003Z Brassica rapa HOM05D000111 ORTHO05D007071 7.6e-06 54.7 73 42.5
C02p04100 Brassica napus HOM05D000111 ORTHO05D007071 9.9e-06 54.3 73 42.5
TPR.G32708 Trifolium pratense HOM05D000111 ORTHO05D001475 9.9e-06 54.3 74 44.6


User provided reference genes

Program Settings