Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G45070 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 2.2e-82 308.9 158 100.0
AT5G36100 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 2.0e-70 269.2 158 87.3
Carub.0007s3177 Capsella rubella HOM05D009566 ORTHO05D007629 5.1e-63 244.6 158 79.7
Sp7g06100 Schrenkiella parvula HOM05D009566 ORTHO05D007629 3.6e-48 195.3 176 63.1
CARHR216660 Cardamine hirsuta HOM05D009566 ORTHO05D007629 2.2e-42 176.0 147 61.9
Thhalv10005424m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 5.0e-42 174.9 157 61.1
A04p10080 Brassica napus HOM05D009566 ORTHO05D007629 8.8e-39 164.1 171 56.7
BraA04t16670Z Brassica rapa HOM05D009566 ORTHO05D007629 8.8e-39 164.1 171 56.7
BcaB06g27006 Brassica carinata HOM05D009566 ORTHO05D007629 1.5e-38 163.3 171 57.3
BcaC02g09508 Brassica carinata HOM05D009566 ORTHO05D007629 3.4e-38 162.2 170 55.9
BolC4t25935H Brassica oleracea HOM05D009566 ORTHO05D007629 1.7e-37 159.8 170 55.3
C04p43550 Brassica napus HOM05D009566 ORTHO05D007629 3.1e-36 155.6 169 53.8
BcaB02g08045 Brassica carinata HOM05D009566 ORTHO05D007629 7.5e-30 134.4 136 58.8
Aa31LG9G17880 Aethionema arabicum HOM05D009566 ORTHO05D007629 1.5e-25 120.2 126 56.3
BraA02t06358Z Brassica rapa HOM05D009566 ORTHO05D007629 7.3e-25 117.9 152 47.4
A02p13020 Brassica napus HOM05D009566 ORTHO05D007629 1.0e-23 114.0 152 46.1
C02p21140 Brassica napus HOM05D009566 ORTHO05D007629 1.4e-23 113.6 147 47.6
THA.LOC104823805 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 5.2e-23 111.7 190 39.5
AL2G19730 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 2.0e-22 109.8 149 47.0
BcaC03g14675 Brassica carinata HOM05D009566 ORTHO05D007629 7.5e-22 107.8 152 44.1
BolC2t08254H Brassica oleracea HOM05D009566 ORTHO05D007629 7.5e-22 107.8 152 44.1
CARHR056580 Cardamine hirsuta HOM05D009566 ORTHO05D007629 1.3e-21 107.1 148 47.3
AT1G65090 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 3.7e-21 105.5 150 45.3
Carub.0002s1043 Capsella rubella HOM05D009566 ORTHO05D007629 8.3e-21 104.4 149 45.0
Sp5g19730 Schrenkiella parvula HOM05D009566 ORTHO05D007629 1.4e-20 103.6 144 46.5
THA.LOC104821804 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 5.4e-20 101.7 186 38.7
BcaB05g24082 Brassica carinata HOM05D009566 ORTHO05D007629 1.7e-18 96.7 79 65.8
Aa31LG2G2280 Aethionema arabicum HOM05D009566 ORTHO05D007629 2.9e-13 79.3 160 36.2
Eucgr.H01377 Eucalyptus grandis HOM05D007504 ORTHO05D007629 1.2e-11 73.9 154 33.1
VMungo0720G1881 Vigna mungo HOM05D007504 ORTHO05D007629 1.2e-11 73.9 65 56.9
Lj5g0006161 Lotus japonicus HOM05D007504 ORTHO05D007629 1.6e-11 73.6 67 53.7
Thhalv10022484m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 2.1e-11 73.2 151 37.7
Atru.chr12.1547 Acer truncatum HOM05D007504 ORTHO05D007629 6.0e-11 71.6 67 55.2
Sabra19G0056400 Salix brachista HOM05D007504 ORTHO05D007629 2.3e-10 69.7 101 41.6
Manes.08G105000 Manihot esculenta HOM05D007504 ORTHO05D007629 3.9e-10 68.9 67 50.7
Actinidia38910 Actinidia chinensis HOM05D007504 ORTHO05D007629 1.1e-09 67.4 153 33.3
Potri.019G052300 Populus trichocarpa HOM05D007504 ORTHO05D007629 1.1e-09 67.4 77 50.6
Nitab4.5_0000456g0090 Nicotiana tabacum HOM05D007504 ORTHO05D007629 1.5e-09 67.0 156 32.1
FAN05G3219 Fragaria x ananassa HOM05D007504 ORTHO05D007629 1.9e-09 66.6 135 35.6
MD12G1258000 Malus domestica HOM05D007504 ORTHO05D007629 1.9e-09 66.6 84 45.2
Medtr1g078420 Medicago truncatula HOM05D007504 ORTHO05D007629 2.5e-09 66.2 123 33.3
RcHm_v2.0_Chr3g0448301 Rosa chinensis HOM05D007504 ORTHO05D007629 3.3e-09 65.9 80 47.5
DCAR_029902 Daucus carota HOM05D007504 ORTHO05D007629 4.3e-09 65.5 70 47.1
Nitab4.5_0000276g0060 Nicotiana tabacum HOM05D007504 ORTHO05D007629 4.3e-09 65.5 156 32.7
Glyma.20G219900 Glycine max HOM05D007504 ORTHO05D007629 5.6e-09 65.1 63 49.2
Phvul.010G077868 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 5.6e-09 65.1 90 42.2
TWI14G0943 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 5.6e-09 65.1 152 38.8
Ah.06g195770 Amaranthus hybridus HOM05D007504 ORTHO05D007629 7.3e-09 64.7 146 32.2
FvH4_6g00830 Fragaria vesca HOM05D007504 ORTHO05D007629 7.3e-09 64.7 207 28.0
FAN09G1848 Fragaria x ananassa HOM05D007504 ORTHO05D007629 7.3e-09 64.7 70 50.0
FAN14G3522 Fragaria x ananassa HOM05D007504 ORTHO05D007629 7.3e-09 64.7 207 28.0
Oeu014606.1 Olea europaea HOM05D007504 ORTHO05D007629 7.3e-09 64.7 79 48.1
Oeu008540.1 Olea europaea HOM05D007504 ORTHO05D007629 9.5e-09 64.3 96 39.6
arahy.Tifrunner.gnm1.ann1.DN7JE5 Arachis hypogaea HOM05D007504 ORTHO05D007629 1.2e-08 63.9 67 52.2
QL01p050434 Quercus lobata HOM05D007504 ORTHO05D007629 1.2e-08 63.9 70 47.1
Rhsim09G0131100 Rhododendron simsii HOM05D007504 ORTHO05D007629 1.2e-08 63.9 68 47.1
Cfa006286 Carpinus fangiana HOM05D007504 ORTHO05D007629 1.6e-08 63.5 66 51.5
Psat6g051960 Pisum sativum HOM05D007504 ORTHO05D007629 1.6e-08 63.5 75 42.7
arahy.Tifrunner.gnm1.ann1.V3BTAU Arachis hypogaea HOM05D007504 ORTHO05D007629 2.8e-08 62.8 67 50.7
CSS0023929 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 3.6e-08 62.4 80 42.5
CSS0043883 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 3.6e-08 62.4 80 42.5
PSO017G3378 Papaver somniferum HOM05D007504 ORTHO05D007629 6.2e-08 61.6 65 47.7
PGR031G1611 Punica granatum HOM05D007504 ORTHO05D007629 6.2e-08 61.6 67 49.3
Sc09g0001620 Simmondsia chinensis HOM05D007504 ORTHO05D007629 6.2e-08 61.6 71 43.7
Sc09g0001640 Simmondsia chinensis HOM05D007504 ORTHO05D007629 6.2e-08 61.6 71 43.7
Cpa.g.sc123.15 Carica papaya HOM05D007504 ORTHO05D007629 8.1e-08 61.2 69 55.1
CiPaw.07G074500 Carya illinoinensis HOM05D007504 ORTHO05D007629 1.1e-07 60.8 72 47.2
Haze_04521 Corylus avellana HOM05D007504 ORTHO05D007629 1.4e-07 60.5 67 47.8
Duzib177G0136 Durio zibethinus HOM05D007504 ORTHO05D007629 1.4e-07 60.5 73 42.5
PGSC0003DMG400016931 Solanum tuberosum HOM05D007504 ORTHO05D007629 1.4e-07 60.5 141 33.3
Prupe.6G358500 Prunus persica HOM05D007504 ORTHO05D007629 1.8e-07 60.1 66 47.0
Sopen04g022690 Solanum pennellii HOM05D007504 ORTHO05D007629 1.8e-07 60.1 160 31.9
EL10Ac4g09412 Beta vulgaris HOM05D007504 ORTHO05D007629 2.3e-07 59.7 68 47.1
Cc09_g03320 Coffea canephora HOM05D007504 ORTHO05D007629 2.3e-07 59.7 71 46.5
AUR62000366 Chenopodium quinoa HOM05D007504 ORTHO05D007629 3.1e-07 59.3 143 32.2
Peaxi162Scf00994g00026 Petunia axillaris HOM05D007504 ORTHO05D007629 4.0e-07 58.9 96 38.5
Hund21875 Selenicereus undatus HOM05D007504 ORTHO05D007629 4.0e-07 58.9 148 30.4
TWI59G0549 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 4.0e-07 58.9 74 47.3
Dinv02913 Davidia involucrata HOM05D007504 ORTHO05D007629 5.2e-07 58.5 68 44.1
Lalb_Chr21g0311381 Lupinus albus HOM05D007504 ORTHO05D007629 5.2e-07 58.5 107 32.7
Solyc04g051280.4 Solanum lycopersicum HOM05D007504 ORTHO05D007629 5.2e-07 58.5 95 36.8
Ca_09972_v3 Cicer arietinum L. HOM05D007504 ORTHO05D007629 6.8e-07 58.2 66 45.5
MELO3C021807.2 Cucumis melo HOM05D007504 ORTHO05D007629 6.8e-07 58.2 85 42.4
Migut.F01885 Erythranthe guttata HOM05D007504 ORTHO05D007629 6.8e-07 58.2 101 36.6
CAN.G29.22 Capsicum annuum HOM05D007504 ORTHO05D007629 8.9e-07 57.8 95 35.8
SHI33673 Sapria himalayana HOM05D007504 ORTHO05D000001 8.9e-07 57.8 88 36.4
TPR.G14656 Trifolium pratense HOM05D007504 ORTHO05D007629 8.9e-07 57.8 65 44.6
Gorai.002G147900 Gossypium raimondii HOM05D007504 ORTHO05D007629 3.4e-06 55.8 164 28.0
Thecc.05G204700 Theobroma cacao HOM05D007504 ORTHO05D007629 3.4e-06 55.8 72 43.1
Lsat_1_v5_gn_8_3001 Lactuca sativa HOM05D007504 ORTHO05D007629 4.4e-06 55.5 68 42.6
Aqoxy2G03947 Aquilegia oxysepala HOM05D007504 ORTHO05D007629 5.8e-06 55.1 145 30.3
AUR62006721 Chenopodium quinoa HOM05D007504 ORTHO05D007629 5.8e-06 55.1 150 30.7
COL.COLO4_06844 Corchorus olitorius HOM05D007504 ORTHO05D007629 9.9e-06 54.3 68 41.2
CsaV3_1G037800 Cucumis sativus L. HOM05D007504 ORTHO05D007629 9.9e-06 54.3 66 43.9
TAR636G2263 Trochodendron aralioides HOM05D007504 ORTHO05D007629 9.9e-06 54.3 89 34.8


User provided reference genes

Program Settings