Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 1.7e-126 456.1 239 100.0
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 9.4e-109 397.1 239 87.0
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 5.0e-102 374.8 245 80.8
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 2.9e-94 349.0 241 77.2
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 5.7e-82 308.1 240 68.3
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 5.7e-82 308.1 243 67.9
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 1.7e-78 296.6 239 65.3
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 4.3e-77 292.0 242 64.9
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 9.8e-74 280.8 244 61.5
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 1.0e-70 270.8 241 61.8
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 5.0e-70 268.5 241 61.4
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 8.6e-70 267.7 243 61.3
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 3.0e-62 242.7 247 51.0
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 2.0e-58 229.9 241 55.2
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 2.6e-58 229.6 247 49.8
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 4.4e-58 228.8 247 50.6
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 4.4e-58 228.8 247 49.4
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 4.4e-58 228.8 247 49.8
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 9.9e-58 227.6 247 51.0
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 1.3e-57 227.3 244 54.5
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 1.3e-57 227.3 247 49.8
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.3e-57 227.3 247 49.4
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 4.9e-57 225.3 247 49.4
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 1.4e-56 223.8 244 48.8
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 3.2e-56 222.6 247 50.2
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 4.1e-56 222.2 247 50.2
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 4.1e-56 222.2 247 50.2
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 7.8e-55 218.0 247 48.6
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.3e-54 217.2 248 48.0
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 2.3e-54 216.5 245 51.0
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 3.0e-54 216.1 241 47.7
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 6.6e-54 214.9 249 48.2
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 1.5e-53 213.8 246 45.9
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 2.5e-53 213.0 247 47.0
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 3.3e-53 212.6 244 45.9
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 2.8e-52 209.5 238 47.1
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 8.1e-52 208.0 246 46.3
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 1.8e-51 206.8 251 46.2
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 1.2e-50 204.1 243 46.5
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 2.6e-50 203.0 251 44.6
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 4.4e-50 202.2 246 46.7
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 1.7e-49 200.3 246 45.1
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 6.4e-49 198.4 190 53.2
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 3.2e-48 196.1 247 44.9
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 9.2e-48 194.5 241 43.6
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 1.2e-47 194.1 246 43.1
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 2.1e-47 193.4 246 43.1
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 4.6e-47 192.2 246 46.7
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 4.6e-47 192.2 273 41.4
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 6.0e-47 191.8 243 43.6
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 1.7e-46 190.3 246 42.3
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 3.9e-46 189.1 238 43.3
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 2.5e-45 186.4 243 43.2
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 2.5e-45 186.4 246 42.7
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 7.3e-45 184.9 243 42.0
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 9.6e-45 184.5 243 41.2
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 2.1e-44 183.3 246 41.5
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 4.7e-44 182.2 246 41.9
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 4.7e-44 182.2 246 42.3
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 8.1e-44 181.4 244 43.9
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 8.1e-44 181.4 246 42.7
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 1.1e-43 181.0 246 42.7
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 1.1e-43 181.0 244 40.6
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 4.0e-43 179.1 180 52.2
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 5.2e-43 178.7 244 42.2
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 6.9e-43 178.3 243 40.7
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 1.2e-42 177.6 247 43.3
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 1.5e-42 177.2 233 40.8
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 2.0e-42 176.8 208 45.2
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 4.4e-42 175.6 254 41.3
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 5.8e-42 175.3 246 41.5
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 7.6e-42 174.9 246 40.7
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 1.3e-41 174.1 210 43.8
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 1.3e-41 174.1 230 43.0
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 2.9e-41 172.9 249 40.6
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 6.4e-41 171.8 235 43.4
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 8.4e-41 171.4 224 39.3
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 8.4e-41 171.4 243 39.9
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 1.1e-40 171.0 224 39.3
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 1.4e-40 170.6 210 43.3
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 1.4e-40 170.6 239 40.2
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 4.2e-40 169.1 238 40.8
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 4.6e-39 165.6 214 41.1
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 3.0e-38 162.9 209 41.1
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 8.7e-38 161.4 241 42.3
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 7.3e-37 158.3 265 39.2
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 9.6e-37 157.9 241 38.6
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 3.6e-36 156.0 252 39.7
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 3.6e-36 156.0 181 45.9
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 1.7e-33 147.1 214 38.3
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 6.4e-33 145.2 243 35.4
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 1.4e-32 144.1 177 42.9
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 1.9e-32 143.7 251 39.8
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 4.2e-32 142.5 173 45.7
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 7.1e-32 141.7 242 36.0
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 1.8e-30 137.1 247 36.4
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 8.7e-30 134.8 209 38.8
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 2.8e-28 129.8 177 42.4
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 9.0e-27 124.8 266 34.2
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 8.4e-25 118.2 237 35.0
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.9e-24 117.1 246 33.7
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 4.6e-23 112.5 245 34.3
Zm00001eb433940 Zea mays HOM05D006386 ORTHO05D007575 5.1e-22 109.0 201 32.3
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 8.7e-22 108.2 139 48.2
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 5.6e-21 105.5 125 44.8
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 9.0e-19 98.2 78 60.3
Zm00001eb065850 Zea mays HOM05D006386 ORTHO05D007575 2.2e-17 93.6 202 30.7
Os02g0620100 Oryza sativa ssp. japonica HOM05D006386 ORTHO05D007575 4.9e-17 92.4 238 26.1
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 7.1e-16 88.6 147 40.1
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 3.7e-12 76.3 61 62.3
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 8.2e-12 75.1 61 59.0
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 5.3e-11 72.4 129 33.3
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 1.1e-08 64.7 130 35.4
Rhsim08G0139600 Rhododendron simsii HOM05D006386 ORTHO05D007575 2.5e-08 63.5 39 71.8
Gorai.007G248400 Gossypium raimondii HOM05D006386 ORTHO05D007575 3.6e-07 59.7 41 53.7
Gorai.N008500 Gossypium raimondii HOM05D006386 ORTHO05D007575 1.0e-06 58.2 42 50.0


User provided reference genes

Program Settings