Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 0.0e+00 1498.8 788 100.0
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 0.0e+00 1327.0 788 88.8
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 0.0e+00 1259.2 791 85.5
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 0.0e+00 1227.2 793 83.4
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 0.0e+00 1202.2 791 81.3
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 0.0e+00 1169.8 788 78.9
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 0.0e+00 1167.9 792 79.7
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 0.0e+00 1155.2 784 78.8
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 0.0e+00 1153.7 785 78.7
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 0.0e+00 1121.7 788 78.3
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 1.4e-305 1052.7 780 74.6
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 2.3e-297 1025.4 784 72.6
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 2.3e-268 929.1 813 62.9
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 3.9e-268 928.3 785 68.2
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 3.2e-238 828.9 823 58.4
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 3.8e-231 805.4 566 77.0
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 1.1e-227 793.9 727 62.6
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 3.3e-227 792.3 552 77.4
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.3e-218 763.8 856 52.1
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 1.6e-218 763.5 849 52.5
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.9e-217 758.1 856 51.9
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 2.9e-215 752.7 851 51.7
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.8e-215 752.3 853 52.1
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 4.2e-214 748.8 855 51.1
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 5.1e-212 741.9 855 51.1
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.1e-212 741.9 856 51.2
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.1e-211 740.7 855 51.3
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 3.3e-211 739.2 855 50.3
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 5.7e-211 738.4 858 50.5
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 9.0e-209 731.1 830 51.1
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.7e-207 726.9 857 50.2
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 2.2e-207 726.5 832 51.2
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 1.9e-206 723.4 866 49.9
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 1.2e-205 720.7 859 49.5
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 1.2e-205 720.7 862 50.1
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 6.1e-205 718.4 838 51.0
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.8e-204 716.8 827 51.6
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.8e-204 716.8 853 49.5
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 1.1e-203 714.1 836 51.4
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 5.7e-203 711.8 861 48.8
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 9.7e-203 711.1 850 50.4
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 2.2e-202 709.9 847 49.1
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 2.8e-202 709.5 868 50.7
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 2.8e-202 709.5 861 48.9
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 3.7e-202 709.1 896 47.4
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 4.8e-202 708.8 860 48.7
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 3.1e-201 706.1 861 48.8
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.2e-199 699.9 856 48.6
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 2.9e-199 699.5 861 48.8
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 8.5e-199 698.0 855 48.8
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 1.2e-197 694.1 833 50.2
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 2.7e-197 693.0 831 49.3
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 3.6e-197 692.6 855 48.5
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 6.1e-197 691.8 865 48.8
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 7.9e-197 691.4 855 48.4
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.0e-196 691.0 864 49.0
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 3.0e-196 689.5 859 48.4
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 8.8e-196 688.0 815 49.2
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 8.8e-196 688.0 862 48.5
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 9.7e-195 684.5 834 49.6
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 3.7e-194 682.6 847 47.8
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 6.3e-194 681.8 862 48.0
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.8e-193 680.2 854 49.1
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 7.0e-193 678.3 829 49.0
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 9.1e-193 677.9 831 49.3
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.2e-192 677.6 831 49.2
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.0e-191 674.5 835 48.6
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 2.2e-191 673.3 830 48.8
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 3.8e-191 672.5 972 44.4
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 1.1e-190 671.0 858 47.1
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 2.7e-189 666.4 822 49.1
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 6.1e-189 665.2 888 47.2
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 1.4e-188 664.1 833 48.5
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.3e-188 663.3 852 47.3
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 5.2e-188 662.1 716 52.9
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.5e-187 660.6 861 46.8
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 2.2e-183 646.7 797 48.3
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 9.4e-182 641.3 841 47.4
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 2.7e-181 639.8 859 47.5
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 3.0e-180 636.3 851 47.4
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 1.5e-179 634.0 980 42.4
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 4.8e-178 629.0 845 45.3
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 5.4e-177 625.5 858 47.0
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 7.0e-177 625.2 848 46.0
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 1.6e-176 624.0 845 45.6
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 2.0e-176 623.6 862 46.1
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 4.5e-176 622.5 825 46.1
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.7e-175 620.5 845 44.6
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 3.8e-175 619.4 824 45.9
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.1e-174 617.8 844 44.7
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 4.2e-174 615.9 853 45.1
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 9.4e-174 614.8 816 45.5
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 8.0e-173 611.7 858 45.9
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 2.3e-172 610.1 816 45.2
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.5e-171 607.4 779 47.2
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 8.3e-170 601.7 851 44.5
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.1e-169 601.3 843 44.2
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 3.8e-167 592.8 822 44.2
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 8.6e-167 591.7 656 52.4
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 8.0e-165 585.1 859 43.7
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 6.8e-164 582.0 986 40.0
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.0e-163 580.5 888 42.3
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 8.3e-162 575.1 830 43.3
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 3.2e-161 573.2 837 43.1
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 4.1e-161 572.8 838 44.2
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 1.0e-159 568.2 697 47.9
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 1.3e-159 567.8 804 43.4
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.3e-159 567.0 817 43.7
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 5.0e-159 565.8 858 43.8
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 5.0e-159 565.8 855 44.4
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 2.8e-157 560.1 859 44.4
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.0e-156 558.1 810 43.8
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.1e-156 556.6 858 42.0
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 3.1e-156 556.6 794 42.8
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 1.2e-155 554.7 886 43.1
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 2.0e-155 553.9 854 41.9
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 1.2e-152 544.7 805 42.1
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.6e-152 544.3 845 43.0
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 2.0e-152 543.9 848 42.9
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 4.3e-150 536.2 802 43.1
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 2.1e-149 533.9 789 42.7
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 4.4e-147 526.2 835 41.9
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.3e-146 524.6 687 45.6
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 3.0e-143 513.5 907 39.3
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 5.1e-143 512.7 821 41.7
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.1e-142 511.5 638 47.0
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.5e-142 510.4 636 47.0
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 3.3e-142 510.0 675 48.4
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 6.2e-141 505.8 689 45.1
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 4.3e-134 483.0 619 46.4
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 9.9e-131 471.9 640 45.8
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 1.3e-130 471.5 802 38.8
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 4.9e-130 469.5 818 38.3
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.3e-126 456.8 866 37.9
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 3.6e-125 453.4 631 45.2
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 1.4e-124 451.4 822 36.7
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 1.9e-121 441.0 829 38.1
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 7.1e-121 439.1 615 45.2
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 1.7e-119 434.5 856 38.1
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 4.9e-114 416.4 905 34.9
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 1.6e-112 411.4 301 73.8
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 1.4e-108 398.3 787 36.1
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.6e-104 384.8 805 35.4
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 7.9e-104 382.5 835 35.0
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.4e-100 371.7 574 43.0
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 6.5e-98 362.8 660 39.4
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 3.9e-95 353.6 257 75.5
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 8.7e-95 352.4 754 37.3
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 3.7e-85 320.5 257 69.6
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 1.2e-80 305.4 447 42.7
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.9e-73 281.6 418 42.6
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 5.9e-67 260.0 194 71.6
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 4.4e-54 217.2 669 28.4
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 1.7e-53 215.3 778 29.7
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.8e-50 204.1 437 36.6
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 2.7e-43 181.4 338 39.1
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 3.7e-37 161.0 190 45.8
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.3e-33 147.9 126 56.3
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 3.1e-31 141.4 191 42.4
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 6.8e-31 140.2 154 48.1
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 8.9e-31 139.8 298 33.9
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 8.3e-29 133.3 202 43.1
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 2.1e-27 128.6 154 51.3
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 3.3e-25 121.3 167 47.9
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.4e-23 115.9 230 35.2
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 3.0e-18 98.2 109 47.7
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 5.6e-17 94.0 112 49.1
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 3.6e-16 91.3 109 55.0
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 8.4e-13 80.1 103 47.6
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.2e-12 78.2 73 50.7
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 4.2e-12 77.8 111 41.4
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 5.4e-12 77.4 61 59.0
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 7.1e-12 77.0 103 46.6
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 7.8e-11 73.6 106 41.5
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 6.6e-10 70.5 102 42.2
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 8.7e-10 70.1 53 52.8
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.9e-09 68.9 115 36.5
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 4.0e-07 61.2 43 60.5
MD02G1023900 Malus domestica HOM05D003622 ORTHO05D048666 2.0e-06 58.9 224 28.1
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 4.5e-06 57.8 133 35.3


User provided reference genes

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