Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.2e-166 590.1 395 100.0
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.4e-141 506.9 374 85.8
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 6.7e-128 461.5 396 77.8
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 1.3e-118 430.6 392 71.7
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 2.5e-114 416.4 377 71.4
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 1.6e-113 413.7 371 74.7
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 2.4e-109 399.8 375 73.6
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 5.3e-109 398.7 378 73.5
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 5.3e-109 398.7 375 72.5
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 8.5e-107 391.3 392 68.6
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 2.2e-99 366.7 381 71.1
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 3.8e-99 365.9 381 72.2
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.0e-88 331.3 369 61.5
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 5.4e-85 318.9 270 81.5
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 1.5e-82 310.8 377 62.1
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 2.6e-79 300.1 376 54.3
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 3.7e-78 296.2 386 54.1
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 1.6e-76 290.8 381 54.6
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 1.9e-74 283.9 336 56.8
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 7.3e-74 282.0 381 54.6
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 1.2e-73 281.2 388 50.8
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 1.4e-72 277.7 347 55.3
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 1.4e-72 277.7 380 49.2
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 2.3e-72 276.9 400 48.5
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 3.4e-71 273.1 293 52.2
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 4.9e-70 269.2 378 52.4
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 4.1e-69 266.2 384 49.7
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 5.4e-69 265.8 383 53.3
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.2e-68 264.6 383 55.1
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.6e-68 264.2 415 47.5
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.1e-68 263.8 392 51.5
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 2.7e-68 263.5 381 50.4
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 7.8e-68 261.9 392 48.0
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 1.7e-67 260.8 387 49.9
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 2.3e-67 260.4 391 47.1
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 3.0e-67 260.0 391 52.7
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 4.3e-66 256.1 380 48.9
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 9.5e-66 255.0 395 46.3
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 9.5e-66 255.0 332 50.3
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 2.1e-65 253.8 412 49.5
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 2.1e-65 253.8 387 52.2
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 2.8e-65 253.4 340 56.5
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 6.2e-65 252.3 386 49.0
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 8.1e-65 251.9 377 50.7
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 1.1e-64 251.5 388 50.0
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 1.4e-64 251.1 386 50.5
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 2.3e-64 250.4 381 46.7
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 6.8e-64 248.8 386 48.2
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 6.8e-64 248.8 383 54.0
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 1.5e-63 247.7 387 54.8
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 2.6e-63 246.9 373 49.3
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 2.2e-62 243.8 347 56.5
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.9e-62 243.4 391 50.1
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 3.7e-62 243.0 391 51.4
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 1.9e-61 240.7 387 48.1
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 4.1e-61 239.6 332 51.5
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 7.1e-61 238.8 368 49.7
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 1.6e-60 237.7 401 47.6
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 2.1e-60 237.3 270 48.9
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 2.7e-60 236.9 474 45.1
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.7e-60 236.9 407 48.6
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 7.8e-60 235.3 336 52.1
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 1.0e-59 235.0 388 52.3
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 1.0e-59 235.0 386 50.0
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 1.0e-59 235.0 407 48.4
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 1.0e-59 235.0 195 59.5
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.1e-58 231.5 373 46.9
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 1.5e-58 231.1 340 53.5
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 1.5e-58 231.1 278 48.2
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 2.5e-58 230.3 371 48.5
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 2.5e-58 230.3 386 50.5
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.6e-57 227.6 403 47.1
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 2.1e-57 227.3 347 48.4
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 3.6e-57 226.5 276 46.7
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 3.6e-57 226.5 283 48.1
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 4.7e-57 226.1 373 51.5
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 6.2e-57 225.7 190 58.4
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 8.9e-56 221.9 278 47.5
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 5.8e-55 219.2 383 53.3
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 1.7e-54 217.6 276 50.7
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 2.4e-53 213.8 190 56.8
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 1.2e-52 211.5 394 51.3
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 4.6e-52 209.5 183 57.9
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 6.0e-52 209.1 269 53.9
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 1.3e-51 208.0 192 54.7
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 8.7e-51 205.3 195 54.4
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.1e-50 204.9 273 47.6
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 4.3e-50 203.0 299 42.8
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 2.1e-49 200.7 370 45.7
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 2.8e-49 200.3 460 39.3
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 6.2e-49 199.1 368 45.9
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 5.3e-48 196.1 387 45.0
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 2.6e-47 193.7 188 52.1
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 2.6e-47 193.7 260 46.2
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 3.4e-47 193.4 341 47.5
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.2e-46 190.7 188 52.1
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 8.4e-46 188.7 262 45.4
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 1.3e-43 181.4 166 57.2
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 8.7e-43 178.7 441 39.2
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 2.5e-42 177.2 194 49.0
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 1.3e-41 174.9 269 46.8
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 3.1e-40 170.2 170 55.3
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 6.9e-40 169.1 250 41.6
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.3e-38 164.9 194 45.9
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 9.3e-37 158.7 180 47.2
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 9.3e-37 158.7 204 46.1
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 2.1e-36 157.5 207 43.5
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 1.0e-35 155.2 212 43.4
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 2.3e-35 154.1 206 42.7
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.6e-33 147.9 272 40.8
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 1.2e-31 141.7 179 45.8
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 4.5e-31 139.8 188 49.5
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.4e-16 91.7 128 40.6
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 1.2e-12 78.6 95 50.5
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.5e-10 71.6 77 54.5
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 1.3e-06 58.5 209 42.6


User provided reference genes

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