Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 2.6e-200 701.8 350 100.0
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 5.7e-38 162.5 191 48.2
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 6.5e-34 149.1 156 57.1
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.9e-33 147.5 188 49.5
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 1.6e-32 144.4 189 47.6
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.6e-27 127.9 178 42.1
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 3.5e-27 126.7 268 34.3
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 3.5e-27 126.7 171 43.9
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 1.0e-26 125.2 168 42.3
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 1.3e-26 124.8 176 40.9
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 8.5e-26 122.1 190 36.8
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 8.5e-26 122.1 266 33.5
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 8.5e-26 122.1 178 44.4
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 1.5e-25 121.3 260 35.8
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 1.9e-25 120.9 256 30.9
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 4.2e-25 119.8 155 43.9
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 7.2e-25 119.0 266 32.7
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 9.4e-25 118.6 240 37.9
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.6e-24 117.9 180 40.6
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 2.7e-24 117.1 176 38.1
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 3.6e-24 116.7 265 33.6
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 4.7e-24 116.3 253 32.4
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 8.0e-24 115.5 165 47.9
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 2.3e-23 114.0 260 34.2
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 5.2e-23 112.8 180 39.4
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 8.8e-23 112.1 158 39.2
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 1.2e-22 111.7 233 34.8
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 1.5e-22 111.3 171 42.1
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.5e-22 111.3 162 38.3
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 5.7e-22 109.4 266 31.6
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 9.8e-22 108.6 177 37.9
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 1.3e-21 108.2 264 34.1
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 2.8e-21 107.1 282 31.6
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 4.8e-21 106.3 177 37.9
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 1.1e-20 105.1 157 48.4
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 1.1e-20 105.1 157 48.4
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 2.4e-20 104.0 174 38.5
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 3.1e-20 103.6 263 32.3
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 5.4e-20 102.8 172 37.2
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 9.1e-20 102.1 161 47.2
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 1.6e-19 101.3 263 32.3
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 3.5e-19 100.1 159 47.8
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 7.7e-19 99.0 254 32.7
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 1.3e-18 98.2 154 44.2
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 2.3e-18 97.4 267 31.1
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 2.9e-18 97.1 173 34.1
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 6.6e-18 95.9 161 36.6
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 8.6e-18 95.5 160 38.8
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.1e-17 95.1 187 33.2
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 9.5e-17 92.0 156 39.1
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 9.5e-17 92.0 156 39.1
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 9.5e-17 92.0 166 38.0
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.2e-16 91.7 181 34.3
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 1.2e-16 91.7 157 38.2
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 1.6e-16 91.3 147 38.1
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 6.1e-16 89.4 245 33.9
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 1.0e-15 88.6 226 34.5
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 1.4e-15 88.2 155 38.1
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 2.3e-15 87.4 158 36.1
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 1.5e-14 84.7 248 29.4
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 2.0e-14 84.3 155 38.7
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 2.0e-14 84.3 161 38.5
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 2.0e-14 84.3 245 31.0
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 2.6e-14 84.0 222 36.5
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 2.6e-14 84.0 235 28.9
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 2.6e-14 84.0 158 35.4
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 4.4e-14 83.2 251 28.3
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 4.4e-14 83.2 242 30.2
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 7.5e-14 82.4 161 36.6
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 7.5e-14 82.4 226 31.4
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 9.8e-14 82.0 157 37.6
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 9.8e-14 82.0 157 37.6
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.3e-13 81.6 152 37.5
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 1.3e-13 81.6 153 37.3
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.3e-13 81.6 176 31.8
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 2.2e-13 80.9 243 35.8
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 2.2e-13 80.9 154 36.4
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 3.7e-13 80.1 158 32.9
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 1.1e-12 78.6 155 34.2
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 3.2e-12 77.0 251 32.3
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 4.1e-12 76.6 243 32.1
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 4.1e-12 76.6 167 30.5
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 9.2e-12 75.5 159 34.0
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 2.7e-11 73.9 157 34.4
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.7e-10 71.2 151 32.5
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 2.3e-10 70.9 147 35.4
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 2.3e-10 70.9 247 29.1
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 2.3e-10 70.9 154 33.1
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 2.9e-10 70.5 229 30.1
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 6.6e-10 69.3 239 29.7
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 6.6e-10 69.3 147 33.3
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 2.5e-09 67.4 242 27.3
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 5.6e-09 66.2 243 32.5
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 9.5e-09 65.5 217 28.1
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 9.5e-09 65.5 269 27.1
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 1.2e-08 65.1 239 28.9
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 2.8e-08 63.9 153 33.3
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 2.8e-08 63.9 184 28.3
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 3.6e-08 63.5 136 35.3
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 3.6e-08 63.5 150 30.7
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 4.7e-08 63.2 141 34.0
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 4.7e-08 63.2 271 26.6
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.0e-07 62.0 159 30.8
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 4.0e-07 60.1 77 40.3
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 5.2e-07 59.7 229 28.4
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 6.8e-07 59.3 123 38.2
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 1.2e-06 58.5 155 27.7
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.5e-06 58.2 148 30.4
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 2.0e-06 57.8 266 27.1


User provided reference genes

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