Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G42290 Arabidopsis lyrata HOM05D007138 ORTHO05D026809 3.2e-165 585.1 318 100.0
AT4G14120 Arabidopsis thaliana HOM05D007138 ORTHO05D026809 1.1e-104 384.0 350 64.3
CARHR220140 Cardamine hirsuta HOM05D007138 ORTHO05D026809 2.3e-78 296.6 302 59.6
Carub.0007s2830 Capsella rubella HOM05D007138 ORTHO05D026809 6.1e-47 192.2 256 49.6
AL3G38640 Arabidopsis lyrata HOM05D007138 ORTHO05D009148 1.3e-41 174.5 281 42.7
Sp3g21450 Schrenkiella parvula HOM05D007138 ORTHO05D009148 1.7e-41 174.1 331 41.7
Carub.0003s2404 Capsella rubella HOM05D007138 ORTHO05D009148 4.4e-37 159.5 316 41.5
CARHR099730 Cardamine hirsuta HOM05D007138 ORTHO05D009148 3.7e-36 156.4 330 38.2
BraA07t28655Z Brassica rapa HOM05D007138 ORTHO05D009148 5.9e-34 149.1 317 38.8
A07p08650 Brassica napus HOM05D007138 ORTHO05D009148 1.0e-33 148.3 317 38.8
THA.LOC104804782 Tarenaya hassleriana HOM05D007138 ORTHO05D009148 1.2e-29 134.8 351 35.6
Thhalv10002448m.g Eutrema salsugineum HOM05D007138 ORTHO05D009148 1.5e-29 134.4 378 35.2
C07p13480 Brassica napus HOM05D007138 ORTHO05D009148 1.4e-27 127.9 346 34.1
BolC7t41843H Brassica oleracea HOM05D007138 ORTHO05D009148 1.4e-27 127.9 346 34.1
BcaC06g35563 Brassica carinata HOM05D007138 ORTHO05D009148 1.8e-27 127.5 346 33.8
AT3G23740 Arabidopsis thaliana HOM05D007138 ORTHO05D009148 1.0e-25 121.7 281 35.2
Aa31LG8G10280 Aethionema arabicum HOM05D007138 ORTHO05D009148 7.3e-24 115.5 309 33.7
BcaB06g26533 Brassica carinata HOM05D007138 ORTHO05D009148 3.5e-18 96.7 279 32.6
Gohir.D02G019900 Gossypium hirsutum HOM05D007138 ORTHO05D009148 1.1e-06 58.5 133 34.6
Gorai.005G025100 Gossypium raimondii HOM05D007138 ORTHO05D009148 4.0e-06 56.6 133 33.8
Thecc.04G192200 Theobroma cacao HOM05D007138 ORTHO05D009148 8.9e-06 55.5 154 35.7


User provided reference genes

Program Settings