Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 4.5e-68 261.2 135 100.0
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 2.8e-65 251.9 135 95.6
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 6.4e-62 240.7 135 91.1
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 3.2e-61 238.4 135 91.9
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 3.3e-58 228.4 134 89.6
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 1.0e-56 223.4 137 87.6
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 3.4e-55 218.4 135 84.4
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 8.3e-54 213.8 134 85.8
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 4.1e-53 211.5 135 85.2
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 9.2e-53 210.3 135 84.4
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 1.6e-52 209.5 133 85.0
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 4.6e-52 208.0 136 83.8
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 3.0e-51 205.3 128 82.0
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 6.2e-49 197.6 135 74.8
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 8.1e-49 197.2 129 81.4
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 1.4e-48 196.4 135 80.7
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 3.4e-47 191.8 133 75.2
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 4.4e-47 191.4 135 69.6
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 7.5e-47 190.7 135 71.9
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 1.7e-46 189.5 135 72.6
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 2.2e-46 189.1 135 71.1
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 2.9e-46 188.7 132 71.2
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 2.9e-46 188.7 132 72.0
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 3.7e-46 188.3 135 69.6
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 3.7e-46 188.3 135 69.6
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 1.1e-45 186.8 135 68.9
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 1.4e-45 186.4 135 68.1
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 2.4e-45 185.7 135 68.9
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 4.1e-45 184.9 129 70.5
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 9.2e-45 183.7 136 72.1
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 9.2e-45 183.7 135 68.9
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 2.1e-44 182.6 130 70.8
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 6.0e-44 181.0 130 69.2
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 6.0e-44 181.0 105 79.0
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.0e-43 180.3 116 73.3
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.3e-43 179.9 104 78.8
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 1.7e-43 179.5 109 77.1
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 1.7e-43 179.5 133 68.4
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 2.3e-43 179.1 119 72.3
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 3.0e-43 178.7 120 71.7
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 3.9e-43 178.3 121 74.4
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 5.1e-43 177.9 137 68.6
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 6.6e-43 177.6 111 74.8
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 6.6e-43 177.6 114 75.4
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 8.6e-43 177.2 139 67.6
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 8.6e-43 177.2 112 79.5
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 8.6e-43 177.2 111 73.9
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.1e-42 176.8 130 66.2
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 1.5e-42 176.4 132 66.7
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 2.5e-42 175.6 131 68.7
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 2.5e-42 175.6 118 76.3
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 3.3e-42 175.3 122 72.1
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 3.3e-42 175.3 105 78.1
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 4.3e-42 174.9 130 66.9
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 5.6e-42 174.5 113 78.8
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 7.3e-42 174.1 109 74.3
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 9.5e-42 173.7 113 77.0
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 9.5e-42 173.7 134 67.2
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 1.2e-41 173.3 113 77.9
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.6e-41 172.9 132 68.2
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 2.1e-41 172.6 108 73.1
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 2.8e-41 172.2 133 63.9
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.6e-41 171.8 127 67.7
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 3.6e-41 171.8 132 66.7
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 4.7e-41 171.4 132 68.2
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 4.7e-41 171.4 132 66.7
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 8.1e-41 170.6 114 71.9
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 2.3e-40 169.1 123 65.0
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 4.0e-40 168.3 136 68.4
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 4.0e-40 168.3 132 65.2
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 5.2e-40 167.9 106 77.4
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 5.2e-40 167.9 133 63.2
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 6.8e-40 167.5 123 67.5
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 8.9e-40 167.2 105 73.3
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.5e-39 166.4 116 66.4
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.0e-39 166.0 131 64.9
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.6e-39 165.6 131 64.9
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 4.4e-39 164.9 104 74.0
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 7.6e-39 164.1 127 63.8
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 9.9e-39 163.7 132 62.9
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.3e-38 163.3 135 63.7
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 1.7e-38 162.9 124 62.1
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.2e-38 162.5 97 77.3
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 2.2e-38 162.5 135 63.7
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 3.8e-38 161.8 113 70.8
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 6.4e-38 161.0 162 54.3
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.1e-37 160.2 121 66.9
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 1.1e-37 160.2 117 63.2
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 1.1e-37 160.2 124 62.9
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 1.9e-37 159.5 162 56.2
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 1.9e-37 159.5 99 76.8
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 5.4e-37 157.9 99 74.7
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 9.2e-37 157.1 104 69.2
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 2.1e-36 156.0 122 60.7
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 1.0e-35 153.7 105 69.5
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 2.3e-35 152.5 165 50.3
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.9e-34 149.4 109 67.0
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 2.5e-34 149.1 104 64.4
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 3.6e-33 145.2 209 44.5
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.1e-32 143.7 87 77.0
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 1.1e-32 143.7 174 48.9
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 1.4e-32 143.3 153 54.2
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 3.1e-32 142.1 109 67.9
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 2.6e-31 139.0 109 66.1
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 6.4e-30 134.4 121 59.5
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 6.4e-30 134.4 87 77.0
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 4.3e-26 121.7 75 74.7
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 5.6e-26 121.3 85 71.8
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 1.3e-25 120.2 104 58.7
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.4e-24 116.7 68 83.8
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 2.4e-24 115.9 85 78.8
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 4.0e-24 115.2 103 51.5
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 2.9e-22 109.0 123 48.0
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 2.9e-22 109.0 66 77.3
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 3.8e-22 108.6 67 76.1
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.2e-21 105.5 66 72.7
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 1.3e-19 100.1 82 59.8
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 4.0e-16 88.6 67 65.7
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 5.3e-16 88.2 101 43.6
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 7.6e-15 84.3 98 38.8
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 1.3e-14 83.6 103 39.8
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.1e-13 80.5 57 66.7
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 9.3e-13 77.4 90 36.7
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 6.0e-12 74.7 109 39.4
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 4.8e-09 65.1 66 54.5
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.3e-06 57.0 68 51.5


User provided reference genes

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