Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 4.5e-89 331.3 170 100.0
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 4.5e-89 331.3 170 100.0
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 4.5e-89 331.3 170 100.0
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 2.1e-86 322.4 170 97.1
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 4.7e-86 321.2 170 97.1
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 97.1
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 97.1
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 3.9e-85 318.2 170 95.9
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 5.2e-85 317.8 170 94.7
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 5.2e-85 317.8 170 94.7
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 6.7e-85 317.4 170 94.7
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 8.8e-85 317.0 170 94.7
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 1.5e-84 316.2 170 94.1
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.0e-84 315.8 170 94.1
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 2.0e-84 315.8 170 94.1
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 93.5
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 94.1
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 94.1
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 93.5
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 93.5
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 93.5
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 5.7e-84 314.3 170 93.5
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 7.4e-84 313.9 170 93.5
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 7.4e-84 313.9 169 93.5
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 7.4e-84 313.9 170 92.4
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 92.9
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 92.4
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 92.9
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 1.3e-83 313.2 170 92.4
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 1.7e-83 312.8 169 93.5
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 2.2e-83 312.4 170 92.9
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 2.8e-83 312.0 170 92.4
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 3.7e-83 311.6 170 92.9
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 3.7e-83 311.6 170 92.9
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 6.3e-83 310.8 170 92.9
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 8.2e-83 310.5 170 92.9
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 1.1e-82 310.1 170 91.8
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.1e-82 310.1 168 92.9
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.1e-82 310.1 168 92.9
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 1.1e-82 310.1 168 92.9
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 1.1e-82 310.1 170 92.4
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 1.8e-82 309.3 169 95.3
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.4e-82 308.9 168 91.1
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 2.4e-82 308.9 170 91.2
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 3.1e-82 308.5 169 95.3
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 4.1e-82 308.1 170 91.8
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 4.1e-82 308.1 170 91.2
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 4.1e-82 308.1 170 91.2
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 4.1e-82 308.1 170 91.2
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 5.3e-82 307.8 169 91.7
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 90.6
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 91.2
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 91.2
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 9.1e-82 307.0 170 90.6
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 9.1e-82 307.0 167 93.4
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 9.1e-82 307.0 170 91.2
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 2.6e-81 305.4 170 90.6
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.5e-81 305.1 176 89.8
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 5.9e-81 304.3 166 91.0
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 1.3e-80 303.1 170 89.4
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.7e-80 302.8 170 89.4
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 2.9e-80 302.0 168 90.5
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 6.5e-80 300.8 183 85.8
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 1.5e-79 299.7 165 90.3
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 1.9e-79 299.3 183 85.2
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 3.2e-79 298.5 170 90.0
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.2e-78 296.6 170 90.6
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.7e-78 295.4 190 83.2
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 2.7e-78 295.4 170 86.5
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 2.7e-78 295.4 188 81.4
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 3.0e-77 292.0 157 93.0
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 1.5e-76 289.7 168 86.3
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 1.7e-75 286.2 157 91.7
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 8.2e-75 283.9 168 83.9
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 2.4e-74 282.3 167 83.8
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 5.3e-74 281.2 175 85.1
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 1.6e-73 279.6 151 92.7
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 2.0e-73 279.3 162 88.3
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 2.0e-73 279.3 151 92.7
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 4.5e-73 278.1 147 95.9
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 1.7e-72 276.2 149 91.9
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 3.8e-72 275.0 172 84.3
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 6.5e-72 274.2 164 84.1
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 6.5e-72 274.2 172 84.3
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 5.5e-71 271.2 147 92.5
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.7e-70 268.9 147 92.5
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 3.6e-70 268.5 140 95.0
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 1.5e-68 263.1 140 92.9
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 4.4e-68 261.5 139 94.2
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 2.2e-67 259.2 169 73.4
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 7.0e-66 254.2 170 78.8
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 4.5e-65 251.5 262 57.6
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.5e-63 246.5 164 78.7
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 3.6e-62 241.9 127 96.1
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 6.8e-61 237.7 170 75.9
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 1.2e-60 236.9 170 76.5
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 3.4e-60 235.3 130 92.3
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 4.4e-60 235.0 168 75.0
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 3.5e-57 225.3 229 60.7
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 6.6e-56 221.1 125 91.2
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.9e-55 219.5 120 94.2
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.9e-55 219.5 120 94.2
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 1.9e-55 219.5 233 57.5
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 2.1e-54 216.1 129 84.5
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 6.8e-53 211.1 110 98.2
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 8.3e-51 204.1 109 95.4
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 2.0e-49 199.5 169 59.8
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 4.1e-42 175.3 115 79.1
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 1.6e-41 173.3 176 51.7
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 3.6e-38 162.2 170 55.9
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 1.4e-34 150.2 117 69.2
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 3.0e-32 142.5 76 92.1
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 1.2e-30 137.1 75 89.3
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 2.1e-30 136.3 75 89.3
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 2.3e-24 116.3 60 95.0
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 3.0e-24 115.9 73 76.7
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 8.6e-24 114.4 69 87.0
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 1.4e-18 97.1 50 92.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 7.6e-12 74.7 38 84.2
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.1e-09 66.6 39 76.9


User provided reference genes

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