Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G41840 Arabidopsis lyrata HOM05D007526 ORTHO05D009350 2.1e-101 372.5 198 100.0
BraA04t16457Z Brassica rapa HOM05D007526 ORTHO05D009350 1.1e-81 307.0 199 84.9
CARHR220600 Cardamine hirsuta HOM05D007526 ORTHO05D009350 1.8e-81 306.2 199 86.4
Carub.0007s2786 Capsella rubella HOM05D007526 ORTHO05D009350 1.4e-78 296.6 222 78.4
A04p07660 Brassica napus HOM05D007526 ORTHO05D009350 3.2e-78 295.4 207 80.7
C04p41350 Brassica napus HOM05D007526 ORTHO05D009350 2.1e-77 292.7 207 80.2
BcaB02g08612 Brassica carinata HOM05D007526 ORTHO05D009350 1.7e-76 289.7 210 79.5
BcaC02g09320 Brassica carinata HOM05D007526 ORTHO05D009350 1.7e-76 289.7 207 79.2
BolC4t25713H Brassica oleracea HOM05D007526 ORTHO05D009350 1.7e-76 289.7 207 79.2
Thhalv10026764m.g Eutrema salsugineum HOM05D007526 ORTHO05D009350 2.0e-72 276.2 202 77.7
Sp7g12460 Schrenkiella parvula HOM05D007526 ORTHO05D009350 1.7e-71 273.1 202 77.7
AT4G14380 Arabidopsis thaliana HOM05D007526 ORTHO05D009350 1.9e-70 269.6 202 79.7
Sp3g20910 Schrenkiella parvula HOM05D007526 ORTHO05D009350 5.0e-47 191.8 195 59.5
Thhalv10022185m.g Eutrema salsugineum HOM05D007526 ORTHO05D009350 1.8e-44 183.3 208 57.2
BolC7t41918H Brassica oleracea HOM05D007526 ORTHO05D009350 3.0e-44 182.6 200 57.0
C07p14270 Brassica napus HOM05D007526 ORTHO05D009350 5.1e-44 181.8 193 57.0
A07p09230 Brassica napus HOM05D007526 ORTHO05D009350 1.1e-43 180.6 195 57.9
THA.LOC104808623 Tarenaya hassleriana HOM05D007526 ORTHO05D009350 6.3e-42 174.9 198 54.0
Aa31LG9G2940 Aethionema arabicum HOM05D007526 ORTHO05D009350 7.7e-40 167.9 178 57.9
BraA07t28719Z Brassica rapa HOM05D007526 ORTHO05D009350 7.9e-37 157.9 180 56.1
CARHR099230 Cardamine hirsuta HOM05D007526 ORTHO05D009350 2.6e-35 152.9 203 50.7
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 5.5e-22 108.6 206 39.3
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 2.1e-21 106.7 212 40.6
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 2.1e-21 106.7 199 40.7
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 8.0e-21 104.8 196 39.3
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 1.4e-20 104.0 205 39.0
AL3G37924 Arabidopsis lyrata HOM05D007526 ORTHO05D009350 4.0e-20 102.4 99 60.6
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 2.2e-18 96.7 202 38.1
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 3.7e-18 95.9 193 37.3
CsaV3_3G012050 Cucumis sativus L. HOM05D007526 ORTHO05D009350 4.1e-17 92.4 204 36.8
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 2.0e-16 90.1 198 35.9
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 2.0e-16 90.1 201 38.3
MELO3C006420.2 Cucumis melo HOM05D007526 ORTHO05D009350 2.7e-16 89.7 203 35.0
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 4.5e-16 89.0 201 38.3
FAN17G0331 Fragaria x ananassa HOM05D007526 ORTHO05D009350 4.5e-16 89.0 199 38.7
Potri.008G167200 Populus trichocarpa HOM05D007526 ORTHO05D009350 7.7e-16 88.2 210 37.1
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 1.3e-15 87.4 201 36.3
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 5.0e-15 85.5 204 35.3
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 8.5e-15 84.7 192 37.5
Sabra08G0127400 Salix brachista HOM05D007526 ORTHO05D009350 1.1e-14 84.3 189 36.0
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 1.5e-14 84.0 199 33.7
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 3.2e-14 82.8 194 37.1
TPR.G25185 Trifolium pratense HOM05D007526 ORTHO05D009350 5.5e-14 82.0 210 33.3
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 7.2e-14 81.6 199 33.2
Medtr1g042820 Medicago truncatula HOM05D007526 ORTHO05D009350 6.1e-13 78.6 200 31.0
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 1.0e-12 77.8 198 32.3
Manes.03G164000 Manihot esculenta HOM05D007526 ORTHO05D009350 1.0e-12 77.8 213 32.9
Psat6g104840 Pisum sativum HOM05D007526 ORTHO05D009350 1.0e-12 77.8 201 30.8
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 1.0e-12 77.8 204 34.3
Lalb_Chr19g0128211 Lupinus albus HOM05D007526 ORTHO05D009350 1.8e-12 77.0 210 30.5
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 3.0e-12 76.3 214 33.6
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 8.8e-12 74.7 214 33.2
QL06p018008 Quercus lobata HOM05D007526 ORTHO05D009350 8.8e-12 74.7 53 71.7
TWI09G0237 Tripterygium wilfordii HOM05D007526 ORTHO05D009350 2.0e-11 73.6 202 35.6
Glyma.10G006400 Glycine max HOM05D007526 ORTHO05D009350 4.4e-11 72.4 219 31.1
arahy.Tifrunner.gnm1.ann1.STCN49 Arachis hypogaea HOM05D007526 ORTHO05D009350 7.5e-11 71.6 203 31.5
Sed0008521 Sechium edule HOM05D007526 ORTHO05D009350 7.5e-11 71.6 204 33.8
arahy.Tifrunner.gnm1.ann1.582VFN Arachis hypogaea HOM05D007526 ORTHO05D009350 9.8e-11 71.2 203 31.5
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 9.8e-11 71.2 211 31.8
COL.COLO4_15878 Corchorus olitorius HOM05D007526 ORTHO05D009350 1.3e-10 70.9 91 52.7
Phvul.007G108400 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 1.3e-10 70.9 204 34.3
Glyma.02G005400 Glycine max HOM05D007526 ORTHO05D009350 2.8e-10 69.7 211 30.8
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 4.9e-10 68.9 206 32.0
Manes.15G040900 Manihot esculenta HOM05D007526 ORTHO05D009350 6.3e-10 68.6 210 31.4
TPR.G1498 Trifolium pratense HOM05D007526 ORTHO05D009350 1.8e-09 67.0 64 54.7
MD13G1214200 Malus domestica HOM05D007526 ORTHO05D009350 7.0e-09 65.1 211 31.3
Lj5g0022077 Lotus japonicus HOM05D007526 ORTHO05D009350 9.2e-09 64.7 215 30.2
Glyma.20G209600 Glycine max HOM05D007526 ORTHO05D009350 1.2e-08 64.3 197 30.5
Gohir.D09G230800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 2.0e-08 63.5 162 32.7
VMungo0720G0856 Vigna mungo HOM05D007526 ORTHO05D009350 2.0e-08 63.5 233 29.6
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 3.5e-08 62.8 204 28.9
Medtr1g076110 Medicago truncatula HOM05D007526 ORTHO05D009350 3.5e-08 62.8 101 42.6
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 5.9e-08 62.0 195 32.3
CSS0033898 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 2.9e-07 59.7 203 28.1
Phvul.007G273600 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 8.6e-07 58.2 233 28.8
CANSAT78G2320 Cannabis sativa HOM05D007526 ORTHO05D009350 1.1e-06 57.8 220 30.5
Glyma.10G180900 Glycine max HOM05D007526 ORTHO05D009350 1.1e-06 57.8 199 29.1
Hma1.2p1_0267F.1_g107260 Hydrangea macrophylla HOM05D007526 ORTHO05D009350 2.5e-06 56.6 79 44.3
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 2.5e-06 56.6 192 28.1
CSS0016058 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 4.3e-06 55.8 203 29.1
Oeu055231.1 Olea europaea HOM05D007526 ORTHO05D009350 9.5e-06 54.7 211 29.4


User provided reference genes

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