Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G40240 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 1.1e-26 122.5 60 100.0
CARHR217290 Cardamine hirsuta HOM05D000003 ORTHO05D001498 3.5e-12 74.3 57 57.9
CARHR256080 Cardamine hirsuta HOM05D000003 ORTHO05D001498 3.5e-12 74.3 46 69.6
AL4G33730 Arabidopsis lyrata HOM05D000419 ORTHO05D000692 1.7e-11 72.0 57 57.9
AL8G40900 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 6.6e-11 70.1 55 61.8
AL1G66700 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 1.5e-10 68.9 44 65.9
BcaC04g21923 Brassica carinata HOM05D000003 ORTHO05D001498 2.5e-10 68.2 51 62.7
C04p27500 Brassica napus HOM05D000003 ORTHO05D001498 3.3e-10 67.8 51 60.8
CARHR108240 Cardamine hirsuta HOM05D000003 ORTHO05D001498 5.6e-10 67.0 48 60.4
BcaC01g02062 Brassica carinata HOM05D000003 ORTHO05D001498 7.3e-10 66.6 51 58.8
CARHR104190 Cardamine hirsuta HOM05D000003 ORTHO05D001498 7.3e-10 66.6 52 61.5
BraA01t02684Z Brassica rapa HOM05D000003 ORTHO05D001498 9.5e-10 66.2 49 59.2
AL5G23780 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 1.2e-09 65.9 44 65.9
BolC9t55478H Brassica oleracea HOM05D000003 ORTHO05D001498 1.2e-09 65.9 71 49.3
BolC1t01233H Brassica oleracea HOM05D000003 ORTHO05D001498 2.1e-09 65.1 50 56.0
BcaB07g32761 Brassica carinata HOM05D000003 ORTHO05D001498 2.8e-09 64.7 49 57.1
BolC3t19157H Brassica oleracea HOM05D000003 ORTHO05D001498 3.6e-09 64.3 71 46.5
BraA02t08383Z Brassica rapa HOM05D000003 ORTHO05D001498 3.6e-09 64.3 40 65.0
AT3G27140 Arabidopsis thaliana HOM05D000223 ORTHO05D001193 4.7e-09 63.9 43 67.4
BraA01t00843Z Brassica rapa HOM05D000003 ORTHO05D001498 4.7e-09 63.9 46 63.0
BolC4t25964H Brassica oleracea HOM05D000003 ORTHO05D001498 6.2e-09 63.5 51 56.9
BcaB05g24269 Brassica carinata HOM05D000003 ORTHO05D001498 8.1e-09 63.2 49 55.1
BcaC04g21023 Brassica carinata HOM05D000003 ORTHO05D001498 8.1e-09 63.2 52 55.8
BcaC09g50917 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-08 62.8 52 53.8
BcaB05g24488 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-08 62.4 49 55.1
BcaB07g33892 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-08 62.4 40 70.0
BcaC01g02365 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-08 62.0 46 58.7
BcaC01g03350 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-08 62.0 46 58.7
BolC5t31802H Brassica oleracea HOM05D000003 ORTHO05D001498 1.8e-08 62.0 44 61.4
BcaB03g11737 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-08 61.6 51 58.8
BolC1t05416H Brassica oleracea HOM05D000003 ORTHO05D027432 2.3e-08 61.6 58 50.0
BcaB02g11065 Brassica carinata HOM05D000003 ORTHO05D001498 3.1e-08 61.2 53 52.8
BcaC06g35751 Brassica carinata HOM05D000003 ORTHO05D001498 3.1e-08 61.2 37 73.0
A01p24260 Brassica napus HOM05D000003 ORTHO05D001498 3.1e-08 61.2 49 59.2
A05p25020 Brassica napus HOM05D000003 ORTHO05D001498 3.1e-08 61.2 37 73.0
BolC5t33760H Brassica oleracea HOM05D000003 ORTHO05D001498 3.1e-08 61.2 37 73.0
BolC7t41603H Brassica oleracea HOM05D000003 ORTHO05D001498 3.1e-08 61.2 37 73.0
BcaB05g22683 Brassica carinata HOM05D000003 ORTHO05D001498 4.0e-08 60.8 49 59.2
BcaB08g34533 Brassica carinata HOM05D000003 ORTHO05D027432 4.0e-08 60.8 56 51.8
BcaC05g28342 Brassica carinata HOM05D000003 ORTHO05D001498 4.0e-08 60.8 49 51.0
BcaNung02475 Brassica carinata HOM05D000003 ORTHO05D001498 5.2e-08 60.5 49 57.1
C05p30710 Brassica napus HOM05D000003 ORTHO05D001498 5.2e-08 60.5 47 55.3
BolC7t41060H Brassica oleracea HOM05D000003 ORTHO05D001498 5.2e-08 60.5 37 70.3
Thhalv10009535m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 5.2e-08 60.5 52 55.8
AL4G21420 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 6.8e-08 60.1 44 61.4
BcaC09g51327 Brassica carinata HOM05D000003 ORTHO05D001498 6.8e-08 60.1 34 76.5
BolC1t04389H Brassica oleracea HOM05D000003 ORTHO05D001498 6.8e-08 60.1 59 47.5
BcaC08g44709 Brassica carinata HOM05D000003 ORTHO05D001498 8.9e-08 59.7 39 64.1
BcaC04g20578 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-07 59.3 51 51.0
BcaC07g37622 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-07 58.9 59 45.8
BolC8t47986H Brassica oleracea HOM05D000003 ORTHO05D001498 1.5e-07 58.9 59 45.8
BraA01t02339Z Brassica rapa HOM05D000003 ORTHO05D001498 1.5e-07 58.9 37 70.3
BraA03t14295Z Brassica rapa HOM05D000003 ORTHO05D001498 2.0e-07 58.5 52 53.8
A05p28700 Brassica napus HOM05D000003 ORTHO05D001498 3.4e-07 57.8 38 57.9
BolC3t19098H Brassica oleracea HOM05D000003 ORTHO05D001498 3.4e-07 57.8 49 51.0
BolC4t24029H Brassica oleracea HOM05D000003 ORTHO05D001498 3.4e-07 57.8 49 51.0
BolC7t42070H Brassica oleracea HOM05D000003 ORTHO05D001498 3.4e-07 57.8 51 52.9
CARHR219240 Cardamine hirsuta HOM05D000003 ORTHO05D001498 3.4e-07 57.8 53 49.1
BcaB02g11061 Brassica carinata HOM05D000003 ORTHO05D001498 4.4e-07 57.4 52 51.9
BcaC01g02414 Brassica carinata HOM05D000003 ORTHO05D001498 4.4e-07 57.4 51 52.9
BolC2t10628H Brassica oleracea HOM05D000003 ORTHO05D001498 4.4e-07 57.4 49 51.0
BcaB03g16306 Brassica carinata HOM05D000003 ORTHO05D027432 5.8e-07 57.0 58 44.8
BolC9t56575H Brassica oleracea HOM05D000003 ORTHO05D001498 5.8e-07 57.0 49 51.0
CARHR035000 Cardamine hirsuta HOM05D000003 ORTHO05D001498 7.6e-07 56.6 52 51.9
BcaB07g33382 Brassica carinata HOM05D000003 ORTHO05D001498 1.3e-06 55.8 49 51.0
BcaC01g00202 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-06 55.8 38 65.8
BcaC03g14322 Brassica carinata HOM05D000003 ORTHO05D001498 1.3e-06 55.8 37 62.2
BolC4t23645H Brassica oleracea HOM05D000003 ORTHO05D001498 1.7e-06 55.5 54 48.1
BolC5t32128H Brassica oleracea HOM05D000003 ORTHO05D001498 1.7e-06 55.5 43 58.1
BcaB07g32454 Brassica carinata HOM05D000003 ORTHO05D001498 2.2e-06 55.1 50 52.0
BcaB02g11485 Brassica carinata HOM05D000003 ORTHO05D011793 2.9e-06 54.7 49 51.0
BcaC03g16311 Brassica carinata HOM05D000003 ORTHO05D001498 2.9e-06 54.7 37 62.2
BcaC06g34125 Brassica carinata HOM05D000003 ORTHO05D001498 2.9e-06 54.7 58 43.1
BolC2t10141H Brassica oleracea HOM05D000003 ORTHO05D001498 3.7e-06 54.3 41 63.4
BcaC01g01267 Brassica carinata HOM05D000003 ORTHO05D001498 4.9e-06 53.9 34 67.6
A07p08900 Brassica napus HOM05D000003 ORTHO05D001498 4.9e-06 53.9 33 69.7
BolC3t21319H Brassica oleracea HOM05D000003 ORTHO05D001498 4.9e-06 53.9 34 67.6
AT5G19270 Arabidopsis thaliana HOM05D000003 ORTHO05D001498 6.4e-06 53.5 43 55.8
BcaC02g12052 Brassica carinata HOM05D000003 ORTHO05D001498 6.4e-06 53.5 56 42.9
BcaC08g45793 Brassica carinata HOM05D000003 ORTHO05D027495 8.4e-06 53.1 55 47.3
BolC3t15769H Brassica oleracea HOM05D000003 ORTHO05D001498 8.4e-06 53.1 43 55.8


User provided reference genes

Program Settings