Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 2.3e-125 452.2 223 100.0
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 1.1e-122 443.4 223 97.8
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 1.0e-120 436.8 223 95.5
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 1.0e-117 426.8 223 92.4
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 5.1e-117 424.5 223 93.3
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 6.7e-117 424.1 223 92.8
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 1.9e-116 422.5 223 93.3
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 3.3e-116 421.8 221 93.2
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 9.7e-116 420.2 223 92.4
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 9.7e-116 420.2 223 92.4
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 6.3e-115 417.5 223 91.0
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 1.4e-114 416.4 223 91.0
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 3.1e-114 415.2 223 91.0
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 3.1e-114 415.2 223 91.0
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 6.9e-114 414.1 223 90.6
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 6.9e-114 414.1 223 90.1
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 1.5e-108 396.4 216 90.3
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 4.3e-108 394.8 223 87.9
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 2.8e-107 392.1 223 87.4
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 2.6e-100 369.0 195 91.8
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 8.2e-99 364.0 217 78.8
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 4.1e-98 361.7 225 81.8
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 9.1e-98 360.5 217 77.9
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 2.0e-97 359.4 217 80.6
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 3.5e-97 358.6 220 79.5
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 3.5e-97 358.6 215 83.3
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 2.2e-96 355.9 215 80.9
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 3.8e-96 355.1 218 78.9
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 6.5e-96 354.4 215 80.9
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 3.2e-95 352.1 219 79.5
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 5.5e-95 351.3 219 79.5
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 7.2e-95 350.9 222 78.4
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 2.1e-94 349.4 215 80.0
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 2.1e-94 349.4 221 76.9
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 2.7e-94 349.0 221 77.8
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 2.7e-94 349.0 215 78.6
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 3.6e-94 348.6 215 79.1
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 6.1e-94 347.8 215 79.5
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 8.0e-94 347.4 218 77.5
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 1.0e-93 347.1 222 75.7
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 1.4e-93 346.7 215 80.0
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 1.8e-93 346.3 217 78.3
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 1.8e-93 346.3 216 76.9
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 1.8e-93 346.3 217 77.4
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 1.8e-93 346.3 220 77.3
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 2.3e-93 345.9 222 76.6
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 2.3e-93 345.9 222 77.0
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 2.3e-93 345.9 222 75.2
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 6.7e-93 344.4 222 76.6
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 8.8e-93 344.0 219 78.1
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 1.1e-92 343.6 221 76.9
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.1e-92 343.6 222 76.1
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 1.5e-92 343.2 215 79.5
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 1.5e-92 343.2 218 75.7
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 2.0e-92 342.8 237 73.8
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 2.0e-92 342.8 218 76.6
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 2.6e-92 342.4 219 79.0
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 3.3e-92 342.0 215 76.7
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 4.4e-92 341.7 215 76.7
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 4.4e-92 341.7 220 75.9
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 7.5e-92 340.9 215 78.1
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 9.7e-92 340.5 222 74.8
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 1.3e-91 340.1 220 75.9
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 2.8e-91 339.0 219 77.2
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 2.8e-91 339.0 215 75.8
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 2.8e-91 339.0 215 75.8
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 3.7e-91 338.6 219 77.2
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 4.8e-91 338.2 216 76.4
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 6.3e-91 337.8 215 77.7
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 1.4e-90 336.7 216 76.4
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 3.1e-90 335.5 215 75.3
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 9.1e-90 334.0 216 77.3
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 1.2e-89 333.6 216 77.3
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.6e-89 333.2 213 76.5
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 2.7e-89 332.4 218 75.2
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 4.5e-89 331.6 215 76.3
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 4.5e-89 331.6 216 76.4
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 7.7e-89 330.9 215 75.3
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 7.7e-89 330.9 215 75.8
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 7.7e-89 330.9 216 76.9
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 7.7e-89 330.9 216 76.9
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 6.5e-88 327.8 216 74.5
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 1.5e-87 326.6 216 72.7
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 1.9e-87 326.2 219 76.7
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 2.5e-87 325.9 198 77.3
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 4.2e-87 325.1 215 72.1
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 4.2e-87 325.1 207 77.3
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 3.6e-86 322.0 205 75.1
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 1.2e-84 317.0 208 76.4
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 2.8e-83 312.4 218 70.2
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 8.3e-83 310.8 215 68.8
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 1.1e-82 310.5 219 71.7
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 1.6e-81 306.6 200 70.5
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 3.2e-79 298.9 217 68.2
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 2.1e-78 296.2 217 70.5
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 1.4e-77 293.5 199 70.9
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 1.5e-76 290.0 210 67.6
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 1.5e-76 290.0 215 70.2
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 7.5e-76 287.7 183 73.8
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.3e-75 287.0 206 69.9
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 1.2e-73 280.4 223 61.0
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 1.0e-72 277.3 201 68.2
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 4.7e-70 268.5 191 67.5
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 1.7e-64 250.0 142 83.8
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.3e-64 249.6 261 54.8
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.5e-63 246.9 154 76.0
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 2.5e-63 246.1 151 76.8
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 2.8e-62 242.7 148 79.1
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 7.8e-57 224.6 147 74.8
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 3.9e-56 222.2 172 58.7
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 5.4e-50 201.8 190 48.9
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 6.0e-41 171.8 101 81.2
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 1.2e-38 164.1 208 45.7
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 8.1e-30 134.8 105 61.0
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 4.6e-25 119.0 87 62.1
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 2.3e-24 116.7 66 81.8
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 7.4e-23 111.7 99 57.6
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.3e-22 110.9 66 77.3
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 8.1e-22 108.2 86 61.6
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 8.7e-16 88.2 66 66.7
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 2.5e-10 70.1 144 33.3
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 3.0e-08 63.2 41 65.9
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 1.6e-06 57.4 157 29.3
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 2.1e-06 57.0 157 28.7
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 2.1e-06 57.0 157 28.7
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 2.1e-06 57.0 147 27.9


User provided reference genes

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