Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G39850 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 3.2e-46 188.0 89 100.0
AL6G32760 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 7.2e-46 186.8 89 98.9
AL7G18450 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 3.0e-44 181.4 89 95.5
AT4G33110 Arabidopsis thaliana HOM05D003596 ORTHO05D004256 8.8e-44 179.9 89 93.3
Carub.0007s0734 Capsella rubella HOM05D003596 ORTHO05D004256 7.4e-43 176.8 89 92.1
Thhalv10025572m.g Eutrema salsugineum HOM05D003596 ORTHO05D004256 6.3e-42 173.7 89 88.8
A01p05090 Brassica napus HOM05D003596 ORTHO05D004256 8.2e-42 173.3 89 88.8
BraA01t00492Z Brassica rapa HOM05D003596 ORTHO05D004256 8.2e-42 173.3 89 88.8
Sp7g30860 Schrenkiella parvula HOM05D003596 ORTHO05D004256 8.2e-42 173.3 89 89.9
CARHR241140 Cardamine hirsuta HOM05D003596 ORTHO05D004256 1.4e-41 172.6 89 88.8
AT4G33120 Arabidopsis thaliana HOM05D003596 ORTHO05D004256 1.8e-41 172.2 89 87.6
A03p61780 Brassica napus HOM05D003596 ORTHO05D004256 1.8e-41 172.2 89 86.5
BraA03t15215Z Brassica rapa HOM05D003596 ORTHO05D004256 1.8e-41 172.2 89 86.5
BcaC09g52108 Brassica carinata HOM05D003596 ORTHO05D004256 4.1e-41 171.0 89 87.6
C01p05570 Brassica napus HOM05D003596 ORTHO05D004256 4.1e-41 171.0 89 87.6
BolC1t00537H Brassica oleracea HOM05D003596 ORTHO05D004256 4.1e-41 171.0 89 87.6
BolC7t46393H Brassica oleracea HOM05D003596 ORTHO05D004256 4.1e-41 171.0 89 85.4
C07p59490 Brassica napus HOM05D003596 ORTHO05D004256 5.3e-41 170.6 89 85.4
BcaC09g52112 Brassica carinata HOM05D003596 ORTHO05D004256 5.9e-40 167.2 89 85.4
BolC7t46392H Brassica oleracea HOM05D003596 ORTHO05D004256 1.7e-39 165.6 89 82.0
THA.LOC104803717 Tarenaya hassleriana HOM05D003596 ORTHO05D004256 8.5e-39 163.3 89 83.1
PSO210G3757 Papaver somniferum HOM05D003596 ORTHO05D004256 1.2e-37 159.5 89 82.0
MELO3C016892.2 Cucumis melo HOM05D003596 ORTHO05D004256 1.6e-37 159.1 89 80.9
Potri.018G060000 Populus trichocarpa HOM05D003596 ORTHO05D004256 1.6e-37 159.1 89 79.8
Migut.A00103 Erythranthe guttata HOM05D003596 ORTHO05D004256 2.7e-37 158.3 89 79.8
EL10Ac2g03812 Beta vulgaris HOM05D003596 ORTHO05D004256 3.6e-37 157.9 89 79.8
PSO210G4954 Papaver somniferum HOM05D003596 ORTHO05D004256 3.6e-37 157.9 89 80.9
Prupe.1G407700 Prunus persica HOM05D003596 ORTHO05D004256 6.1e-37 157.1 89 78.7
Ciclev10008761m.g Citrus clementina HOM05D003596 ORTHO05D004256 8.0e-37 156.8 88 77.3
CsaV3_4G035870 Cucumis sativus L. HOM05D003596 ORTHO05D004256 8.0e-37 156.8 89 78.7
Sed0005044 Sechium edule HOM05D003596 ORTHO05D004256 8.0e-37 156.8 89 79.8
CAN.G143.21 Capsicum annuum HOM05D003596 ORTHO05D004256 1.0e-36 156.4 89 78.7
FAN15G0358 Fragaria x ananassa HOM05D003596 ORTHO05D004256 1.0e-36 156.4 89 80.9
Lj1g0007600 Lotus japonicus HOM05D003596 ORTHO05D004256 1.0e-36 156.4 89 77.5
THA.LOC104803716 Tarenaya hassleriana HOM05D003596 ORTHO05D004256 1.0e-36 156.4 89 78.7
CANSAT21G2424 Cannabis sativa HOM05D003596 ORTHO05D004256 1.4e-36 156.0 89 79.8
Gohir.A05G040200 Gossypium hirsutum HOM05D003596 ORTHO05D004256 1.4e-36 156.0 89 78.7
Aa31sc651G10 Aethionema arabicum HOM05D003596 ORTHO05D004256 1.8e-36 155.6 79 87.3
Lsat_1_v5_gn_7_60761 Lactuca sativa HOM05D003596 ORTHO05D004256 1.8e-36 155.6 89 76.4
arahy.Tifrunner.gnm1.ann1.YCFU7L Arachis hypogaea HOM05D003596 ORTHO05D004256 2.3e-36 155.2 89 77.5
Sabra18G0052600 Salix brachista HOM05D003596 ORTHO05D004256 2.3e-36 155.2 89 76.4
Aqoxy7G03993 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 3.0e-36 154.8 89 76.4
Cpa.g.sc91.83 Carica papaya HOM05D003596 ORTHO05D004256 3.0e-36 154.8 89 75.3
TPR.G3519 Trifolium pratense HOM05D003596 ORTHO05D004256 3.0e-36 154.8 89 76.4
Ah.10g034070 Amaranthus hybridus HOM05D003596 ORTHO05D004256 3.9e-36 154.5 89 76.4
AUR62009106 Chenopodium quinoa HOM05D003596 ORTHO05D004256 3.9e-36 154.5 89 76.4
AUR62020561 Chenopodium quinoa HOM05D003596 ORTHO05D004256 3.9e-36 154.5 89 77.5
Duzib150G0181 Durio zibethinus HOM05D003596 ORTHO05D004256 3.9e-36 154.5 89 78.7
Gohir.A05G040250 Gossypium hirsutum HOM05D003596 ORTHO05D004256 3.9e-36 154.5 88 77.3
Gohir.D05G041700 Gossypium hirsutum HOM05D003596 ORTHO05D004256 3.9e-36 154.5 89 77.5
MD15G1054300 Malus domestica HOM05D003596 ORTHO05D004256 3.9e-36 154.5 89 77.5
Psat5g035520 Pisum sativum HOM05D003596 ORTHO05D004256 3.9e-36 154.5 89 76.4
FvH4_2g31420 Fragaria vesca HOM05D003596 ORTHO05D004256 5.2e-36 154.1 89 79.8
Gorai.009G042400 Gossypium raimondii HOM05D003596 ORTHO05D004256 5.2e-36 154.1 89 77.5
Medtr3g104740 Medicago truncatula HOM05D003596 ORTHO05D004256 5.2e-36 154.1 89 76.4
Nitab4.5_0002797g0010 Nicotiana tabacum HOM05D003596 ORTHO05D004256 5.2e-36 154.1 89 77.5
QL02p000417 Quercus lobata HOM05D003596 ORTHO05D004256 5.2e-36 154.1 88 77.3
Thecc.09G058900 Theobroma cacao HOM05D003596 ORTHO05D004256 5.2e-36 154.1 89 77.5
vmacro17443 Vaccinium macrocarpon HOM05D003596 ORTHO05D004256 5.2e-36 154.1 89 77.5
vmacro22567 Vaccinium macrocarpon HOM05D003596 ORTHO05D004256 5.2e-36 154.1 89 77.5
COL.COLO4_21105 Corchorus olitorius HOM05D003596 ORTHO05D004256 6.7e-36 153.7 89 76.4
PGR031G3048 Punica granatum HOM05D003596 ORTHO05D004256 6.7e-36 153.7 88 76.1
Sopen08g018080 Solanum pennellii HOM05D003596 ORTHO05D004256 6.7e-36 153.7 89 76.4
Sopen08g018130 Solanum pennellii HOM05D003596 ORTHO05D004256 6.7e-36 153.7 89 76.4
CiPaw.15G034900 Carya illinoinensis HOM05D003596 ORTHO05D004256 8.8e-36 153.3 89 78.7
Ca_15814_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 8.8e-36 153.3 89 77.5
Ca_15848_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 8.8e-36 153.3 89 77.5
SalBow4G3232 Salvia bowleyana HOM05D003596 ORTHO05D004256 8.8e-36 153.3 89 78.7
DCAR_003143 Daucus carota HOM05D003596 ORTHO05D004256 1.1e-35 152.9 89 75.3
Eucgr.C00673 Eucalyptus grandis HOM05D003596 ORTHO05D004256 1.1e-35 152.9 89 77.5
Rhsim05G0069300 Rhododendron simsii HOM05D003596 ORTHO05D004256 1.1e-35 152.9 89 77.5
RcHm_v2.0_Chr6g0311401 Rosa chinensis HOM05D003596 ORTHO05D004256 1.1e-35 152.9 89 78.7
Solyc08g062610.4 Solanum lycopersicum HOM05D003596 ORTHO05D004256 1.1e-35 152.9 89 76.4
AUR62020565 Chenopodium quinoa HOM05D003596 ORTHO05D004256 1.5e-35 152.5 89 76.4
Manes.16G083300 Manihot esculenta HOM05D003596 ORTHO05D004256 1.5e-35 152.5 89 77.5
Oeu018037.2 Olea europaea HOM05D003596 ORTHO05D004256 1.5e-35 152.5 89 74.2
Zm00001eb385240 Zea mays HOM05D003596 ORTHO05D004256 1.5e-35 152.5 89 74.2
CSS0012931 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 2.0e-35 152.1 89 76.4
CSS0037935 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 2.0e-35 152.1 89 76.4
Haze_18139 Corylus avellana HOM05D003596 ORTHO05D004256 2.0e-35 152.1 89 76.4
Dinv12460 Davidia involucrata HOM05D003596 ORTHO05D004256 2.0e-35 152.1 89 77.5
FAN24G3537 Fragaria x ananassa HOM05D003596 ORTHO05D004256 2.0e-35 152.1 89 78.7
HanXRQChr03g0071431 Helianthus annuus HOM05D003596 ORTHO05D004256 2.0e-35 152.1 89 75.3
Nitab4.5_0006016g0010 Nicotiana tabacum HOM05D003596 ORTHO05D004256 2.6e-35 151.8 89 76.4
PSO210G3791 Papaver somniferum HOM05D003596 ORTHO05D004256 2.6e-35 151.8 89 77.5
TAR626G0212 Trochodendron aralioides HOM05D003596 ORTHO05D004256 2.6e-35 151.8 89 74.2
unitig_748.g7532 Utricularia gibba HOM05D003596 ORTHO05D004256 2.6e-35 151.8 88 75.0
Lj8C494T3 Lonicera japonica HOM05D003596 ORTHO05D004256 3.3e-35 151.4 89 77.5
Sopen08g018090 Solanum pennellii HOM05D003596 ORTHO05D004256 3.3e-35 151.4 89 75.3
MSTRG.25976 Avicennia marina HOM05D003596 ORTHO05D004256 4.4e-35 151.0 89 74.2
Gorai.009G042500 Gossypium raimondii HOM05D003596 ORTHO05D004256 5.7e-35 150.6 89 76.4
Nn8g38751 Nelumbo nucifera HOM05D003596 ORTHO05D004256 5.7e-35 150.6 88 75.0
ClCG05G018100 Citrullus lanatus HOM05D003596 ORTHO05D004256 7.4e-35 150.2 84 79.8
Cc08_g11040 Coffea canephora HOM05D003596 ORTHO05D004256 7.4e-35 150.2 88 75.0
MELO3C016893.2 Cucumis melo HOM05D003596 ORTHO05D004256 1.3e-34 149.4 89 75.3
GSVIVG01035424001 Vitis vinifera HOM05D003596 ORTHO05D004256 1.3e-34 149.4 87 77.0
Actinidia29320 Actinidia chinensis HOM05D003596 ORTHO05D004256 1.7e-34 149.1 88 76.1
Cfa017996 Carpinus fangiana HOM05D003596 ORTHO05D004256 1.7e-34 149.1 89 75.3
Glyma.04G054100 Glycine max HOM05D003596 ORTHO05D004256 1.7e-34 149.1 89 73.0
VMungo1309G0065 Vigna mungo HOM05D003596 ORTHO05D004256 1.7e-34 149.1 89 71.9
CSS0026815 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 2.2e-34 148.7 89 75.3
CiPaw.15G035100 Carya illinoinensis HOM05D003596 ORTHO05D004256 2.2e-34 148.7 85 78.8
Lj1g0006265 Lotus japonicus HOM05D003596 ORTHO05D004256 2.2e-34 148.7 89 70.8
TWI63G1485 Tripterygium wilfordii HOM05D003596 ORTHO05D004256 4.8e-34 147.5 89 73.0
Hma1.2p1_0732F.1_g210080 Hydrangea macrophylla HOM05D003596 ORTHO05D004256 6.3e-34 147.1 87 77.0
Os06g0574100 Oryza sativa ssp. japonica HOM05D003596 ORTHO05D004256 8.2e-34 146.7 84 76.2
SGA_v2.0_scaffold64G21855 Striga asiatica HOM05D003596 ORTHO05D004256 8.2e-34 146.7 89 71.9
Lalb_Chr08g0244911 Lupinus albus HOM05D003596 ORTHO05D004256 1.1e-33 146.4 89 73.0
Phvul.009G079900 Phaseolus vulgaris HOM05D003596 ORTHO05D004256 1.4e-33 146.0 89 69.7
Hund03308 Selenicereus undatus HOM05D003596 ORTHO05D004256 1.4e-33 146.0 89 71.9
ATR0051G014 Amborella trichopoda HOM05D003596 ORTHO05D004256 5.3e-33 144.1 89 71.9
Sc06g0001060 Simmondsia chinensis HOM05D003596 ORTHO05D004256 9.1e-33 143.3 89 73.0
ECA240G3089 Erigeron canadensis HOM05D003596 ORTHO05D004256 1.6e-32 142.5 79 79.7
HPP92_023980 Vanilla planifolia HOM05D003596 ORTHO05D004256 2.0e-32 142.1 88 65.9
arahy.Tifrunner.gnm1.ann1.N0QBSQ Arachis hypogaea HOM05D003596 ORTHO05D004256 1.3e-31 139.4 81 74.1
Peaxi162Scf00070g00020 Petunia axillaris HOM05D003596 ORTHO05D004256 1.3e-31 139.4 83 73.5
HPP92_024003 Vanilla planifolia HOM05D003596 ORTHO05D004256 1.3e-31 139.4 88 63.6
CDE02G3165 Ceratophyllum demersum HOM05D003596 ORTHO05D004256 3.8e-31 137.9 84 73.8
Glyma.06G054400 Glycine max HOM05D003596 ORTHO05D004256 5.0e-31 137.5 89 66.3
SEGI_31297 Sequoiadendron giganteum HOM05D003596 ORTHO05D004256 2.5e-30 135.2 85 68.2
Sopen08g018100 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-30 134.8 85 69.4
CiPaw.15G035400 Carya illinoinensis HOM05D003596 ORTHO05D004256 8.0e-29 130.2 89 68.5
AagrBONN_evm.TU.Sc2ySwM_117.2988 Anthoceros agrestis HOM05D003596 ORTHO05D004256 3.0e-28 128.3 88 60.2
Pp3c17_22760 Physcomitrium patens HOM05D003596 ORTHO05D004256 1.2e-27 126.3 89 61.8
Aa31LG7G10160 Aethionema arabicum HOM05D003596 ORTHO05D004256 2.0e-27 125.6 65 84.6
Mapoly0103s0018 Marchantia polymorpha HOM05D003596 ORTHO05D004256 2.0e-27 125.6 89 61.8
CBR_g6365 Chara braunii HOM05D003596 ORTHO05D004256 7.5e-27 123.6 88 59.1
SMO271G0076 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 3.1e-25 118.2 89 55.1
Dinv12458 Davidia involucrata HOM05D003596 ORTHO05D004256 4.1e-25 117.9 71 73.2
QL02p000424 Quercus lobata HOM05D003596 ORTHO05D004256 2.7e-24 115.2 70 72.9
Atru.chr7.1921 Acer truncatum HOM05D003596 ORTHO05D004256 3.5e-24 114.8 87 57.5
MBI05_g40673_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 1.7e-23 112.5 88 55.7
MBI11_g17711_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 2.2e-23 112.1 88 54.5
Lj8A493G26 Lonicera japonica HOM05D003596 ORTHO05D004256 3.8e-23 111.3 89 64.0
PSO063G3496 Papaver somniferum HOM05D003596 ORTHO05D004256 1.5e-22 109.4 90 54.4
HanXRQChr11g0345821 Helianthus annuus HOM05D003596 ORTHO05D004256 5.5e-22 107.5 119 43.7
PSO832G4098 Papaver somniferum HOM05D003596 ORTHO05D004256 8.0e-21 103.6 86 54.7
MBI07_g28657_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 1.4e-20 102.8 90 52.2
MBI05_g40674_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 5.2e-20 100.9 89 52.8
PSO832G1397 Papaver somniferum HOM05D003596 ORTHO05D004256 1.5e-19 99.4 90 47.8
PSO063G0821 Papaver somniferum HOM05D003596 ORTHO05D004256 2.0e-19 99.0 90 46.7
Aqoxy7G04015 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 2.6e-19 98.6 87 48.3
MBI05_g21322_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 2.6e-19 98.6 90 50.0
MCO13G046 Micromonas commoda HOM05D003596 ORTHO05D004256 7.5e-19 97.1 91 47.3
PSO386G0091 Papaver somniferum HOM05D003596 ORTHO05D004256 7.5e-19 97.1 91 50.5
PSO339G1340 Papaver somniferum HOM05D003596 ORTHO05D004256 3.7e-18 94.7 90 46.7
PSO229G0119 Papaver somniferum HOM05D003596 ORTHO05D004256 8.3e-18 93.6 90 45.6
PSO675G3982 Papaver somniferum HOM05D003596 ORTHO05D004256 3.1e-17 91.7 90 44.4
PSO675G8489 Papaver somniferum HOM05D003596 ORTHO05D004256 3.1e-17 91.7 90 44.4
Aqoxy7G01445 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 7.0e-17 90.5 89 46.1
Cre09.g398700 Chlamydomonas reinhardtii HOM05D003596 ORTHO05D004256 7.0e-17 90.5 90 43.3
PSO832G4001 Papaver somniferum HOM05D003596 ORTHO05D004256 2.9e-15 85.1 91 49.5
SMO115G0275 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 5.0e-15 84.3 89 38.2
PSO063G4959 Papaver somniferum HOM05D003596 ORTHO05D004256 8.6e-15 83.6 91 48.4
PSO384G1072 Papaver somniferum HOM05D003596 ORTHO05D004256 8.6e-15 83.6 91 45.1
PSO384G1609 Papaver somniferum HOM05D003596 ORTHO05D004256 8.6e-15 83.6 91 45.1
SMO358G0603 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 3.3e-14 81.6 87 36.8
SMO111G0057 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 1.6e-13 79.3 87 36.8
Psat5g035440 Pisum sativum HOM05D003596 ORTHO05D004256 2.1e-13 79.0 54 63.0
Psat5g131440 Pisum sativum HOM05D003596 ORTHO05D004256 2.1e-13 79.0 54 63.0
MBI05_g38197_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 3.6e-13 78.2 70 50.0
MBI12_g10638_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 4.7e-13 77.8 49 69.4
ClCG05G018110 Citrullus lanatus HOM05D003596 ORTHO05D004256 6.1e-13 77.4 89 44.9
Cfa024591 Carpinus fangiana HOM05D000084 ORTHO05D004256 1.8e-12 75.9 78 42.3
Aqoxy7G04012 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 1.5e-11 72.8 74 48.6
BcaNung02153 Brassica carinata HOM05D003596 ORTHO05D004256 1.5e-11 72.8 40 77.5
PSO386G0153 Papaver somniferum HOM05D003596 ORTHO05D004256 2.0e-11 72.4 77 42.9
MBI05_g18185_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 1.3e-07 59.7 58 41.4
MBI05_g21326_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D002168 6.6e-07 57.4 77 40.3


User provided reference genes

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