Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G39650 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 5.3e-59 230.7 108 100.0
AT4G15735 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 4.3e-53 211.1 108 89.8
Thhalv10027327m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 1.5e-37 159.5 105 74.3
Thhalv10026975m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 1.6e-36 156.0 105 72.4
CARHR290170 Cardamine hirsuta HOM05D010807 ORTHO05D010698 2.6e-34 148.7 103 66.0
Carub.0007s2597 Capsella rubella HOM05D010807 ORTHO05D010698 7.2e-32 140.6 100 68.0
BolC8t48301H Brassica oleracea HOM05D010807 ORTHO05D010698 1.1e-29 133.3 102 62.7
Aa31LG10G6400 Aethionema arabicum HOM05D010807 ORTHO05D010698 1.5e-29 132.9 102 60.8
Thhalv10026979m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 9.7e-29 130.2 97 70.1
CARHR056520 Cardamine hirsuta HOM05D010807 ORTHO05D010698 3.4e-26 121.7 104 55.8
AT2G05117 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 1.0e-25 120.2 100 58.0
CARHR260120 Cardamine hirsuta HOM05D010807 ORTHO05D010698 1.7e-25 119.4 101 59.4
THA.LOC104820250 Tarenaya hassleriana HOM05D010807 ORTHO05D010698 2.9e-25 118.6 101 57.4
CARHR290150 Cardamine hirsuta HOM05D010807 ORTHO05D010698 3.2e-24 115.2 101 56.4
Carub.0007s2598 Capsella rubella HOM05D010807 ORTHO05D010698 1.4e-22 109.8 102 52.9
AL7G39660 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 1.8e-22 109.4 100 54.0
AT4G15733 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 3.3e-21 105.1 100 51.0
Thhalv10026885m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 9.7e-21 103.6 100 50.0
Thhalv10027303m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 4.1e-19 98.2 100 48.0
Thhalv10023986m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 1.7e-12 76.3 104 45.2
Aa31LG2G9610 Aethionema arabicum HOM05D009053 ORTHO05D010698 4.8e-12 74.7 103 45.6
Sp2g03540 Schrenkiella parvula HOM05D009053 ORTHO05D010698 2.4e-11 72.4 102 42.2
AT1G60986 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 4.1e-11 71.6 102 44.1
AT1G60989 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 5.3e-11 71.2 103 46.6
Thhalv10023883m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 7.0e-11 70.9 103 41.7
Carub.0002s0423 Capsella rubella HOM05D009053 ORTHO05D010698 9.1e-11 70.5 103 45.6
AL2G15500 Arabidopsis lyrata HOM05D009053 ORTHO05D010698 1.6e-10 69.7 101 41.6
Thhalv10024049m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 8.5e-09 63.9 139 34.5
AL2G15510 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 1.1e-08 63.5 98 40.8
AL2G15522 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 1.1e-08 63.5 98 40.8
Carub.0002s0426 Capsella rubella HOM05D009053 ORTHO05D010698 1.9e-08 62.8 101 39.6
CARHR052060 Cardamine hirsuta HOM05D009053 ORTHO05D010698 1.9e-08 62.8 101 40.6
C01p37590 Brassica napus HOM05D009053 ORTHO05D010698 3.2e-08 62.0 104 39.4
BolC1t03725H Brassica oleracea HOM05D009053 ORTHO05D010698 3.2e-08 62.0 104 39.4
AT1G60983 Arabidopsis thaliana HOM05D009053 ORTHO05D014846 4.2e-08 61.6 98 39.8
A01p29760 Brassica napus HOM05D009053 ORTHO05D010698 4.2e-08 61.6 104 39.4
BraA01t03103Z Brassica rapa HOM05D009053 ORTHO05D010698 4.2e-08 61.6 104 39.4
A01p30500 Brassica napus HOM05D009053 ORTHO05D010698 5.5e-08 61.2 103 37.9
BraA01t03182Z Brassica rapa HOM05D009053 ORTHO05D010698 5.5e-08 61.2 103 37.9
BcaC09g49348 Brassica carinata HOM05D009053 ORTHO05D010698 7.2e-08 60.8 104 39.4
BcaB04g20305 Brassica carinata HOM05D009053 ORTHO05D010698 2.7e-07 58.9 104 38.5
Glyma.18G277700 Glycine max HOM05D015479 ORTHO05D011556 2.7e-07 58.9 61 44.3
AT1G60985 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 4.7e-07 58.2 101 36.6
Glyma.08G254850 Glycine max HOM05D015479 ORTHO05D011556 8.0e-07 57.4 61 44.3
BcaB04g20300 Brassica carinata HOM05D009053 ORTHO05D010698 1.4e-06 56.6 102 37.3
Manes.09G033900 Manihot esculenta HOM05D012769 ORTHO05D011556 3.0e-06 55.5 60 45.0
Carub.0002s0427 Capsella rubella HOM05D009053 ORTHO05D014846 4.0e-06 55.1 98 38.8
Manes.09G033825 Manihot esculenta HOM05D012769 ORTHO05D010698 4.0e-06 55.1 60 43.3


User provided reference genes

Program Settings