Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G39510 Arabidopsis lyrata HOM05D006719 ORTHO05D007063 4.9e-36 154.8 145 100.0
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 3.4e-29 132.1 152 86.2
AT4G15790 Arabidopsis thaliana HOM05D006719 ORTHO05D007063 7.1e-27 124.4 148 89.2
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 1.4e-22 110.2 152 80.3
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 4.0e-22 108.6 155 82.6
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 3.5e-18 95.5 153 70.6
BraA01t02080Z Brassica rapa HOM05D020768 ORTHO05D007063 8.7e-17 90.9 182 55.5
CARHR290290 Cardamine hirsuta HOM05D006719 ORTHO05D007063 1.5e-16 90.1 128 83.6
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 9.7e-16 87.4 152 75.7
A01p21710 Brassica napus HOM05D020768 ORTHO05D007063 8.5e-12 74.3 149 70.5
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 8.5e-12 74.3 59 76.3
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 1.1e-11 73.9 59 76.3
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 1.9e-11 73.2 59 74.6
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 2.1e-10 69.7 55 69.1
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 3.6e-10 68.9 148 59.5
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 6.1e-10 68.2 145 57.9
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 7.9e-10 67.8 142 69.0
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 7.9e-10 67.8 143 63.6
BolC1t02654H Brassica oleracea HOM05D020768 ORTHO05D007063 1.0e-09 67.4 148 67.6
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 1.4e-09 67.0 144 63.2
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 1.4e-09 67.0 142 60.6
BcaC09g50272 Brassica carinata HOM05D020768 ORTHO05D007063 1.8e-09 66.6 148 67.6
C01p27070 Brassica napus HOM05D020768 ORTHO05D007063 1.8e-09 66.6 148 67.6
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 1.1e-08 63.9 149 68.5
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.0e-08 63.2 51 64.7
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 2.5e-08 62.8 149 61.7
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 2.5e-08 62.8 145 55.9
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 3.3e-08 62.4 51 64.7
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 4.3e-08 62.0 144 63.2
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.3e-07 60.5 52 65.4
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.3e-07 60.5 52 65.4
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.7e-07 60.1 146 58.2
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 2.2e-07 59.7 50 64.0
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 2.2e-07 59.7 143 62.9
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 2.2e-07 59.7 146 66.4
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.8e-07 59.3 52 63.5
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 3.7e-07 58.9 50 62.0
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 3.7e-07 58.9 146 52.7
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 8.2e-07 57.8 51 62.7
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 8.2e-07 57.8 132 59.8
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 2.4e-06 56.2 55 56.4
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 2.4e-06 56.2 147 65.3
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 2.4e-06 56.2 139 55.4
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 3.1e-06 55.8 142 64.1
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 4.1e-06 55.5 125 60.8
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 4.1e-06 55.5 47 68.1
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 6.9e-06 54.7 144 53.5
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 6.9e-06 54.7 144 53.5
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 6.9e-06 54.7 41 65.9
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 9.1e-06 54.3 55 56.4
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 9.1e-06 54.3 140 62.9
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 9.1e-06 54.3 51 60.8


User provided reference genes

Program Settings