Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G38540 Arabidopsis lyrata HOM05D010379 ORTHO05D012419 1.3e-64 249.6 126 100.0
Carub.0007s2506 Capsella rubella HOM05D010379 ORTHO05D012419 3.5e-62 241.5 126 96.8
AT4G16447 Arabidopsis thaliana HOM05D010379 ORTHO05D012419 1.7e-61 239.2 126 96.8
Sp7g15000 Schrenkiella parvula HOM05D010379 ORTHO05D012419 2.9e-56 221.9 124 91.9
CARHR222830 Cardamine hirsuta HOM05D010379 ORTHO05D012419 8.3e-56 220.3 127 89.0
Thhalv10026565m.g Eutrema salsugineum HOM05D010379 ORTHO05D012419 1.0e-53 213.4 128 86.7
BcaNung00193 Brassica carinata HOM05D010379 ORTHO05D012419 2.1e-51 205.7 127 84.3
A01p21100 Brassica napus HOM05D010379 ORTHO05D012419 3.6e-51 204.9 127 84.3
BraA01t02021Z Brassica rapa HOM05D010379 ORTHO05D012419 3.6e-51 204.9 127 84.3
C01p26370 Brassica napus HOM05D010379 ORTHO05D012419 2.3e-50 202.2 127 83.5
BcaC09g50349 Brassica carinata HOM05D010379 ORTHO05D012419 3.1e-50 201.8 127 83.5
BolC1t02584H Brassica oleracea HOM05D010379 ORTHO05D012419 3.1e-50 201.8 127 83.5
A03p49840 Brassica napus HOM05D010379 ORTHO05D012419 4.0e-50 201.4 127 82.7
BraA03t14079Z Brassica rapa HOM05D010379 ORTHO05D012419 4.0e-50 201.4 127 82.7
A08p12490 Brassica napus HOM05D010379 ORTHO05D012419 6.8e-50 200.7 128 84.4
C07p47900 Brassica napus HOM05D010379 ORTHO05D012419 6.8e-50 200.7 127 81.9
BolC7t45312H Brassica oleracea HOM05D010379 ORTHO05D012419 6.8e-50 200.7 127 81.9
BraA08t33240Z Brassica rapa HOM05D010379 ORTHO05D012419 6.8e-50 200.7 128 84.4
BolC8t48370H Brassica oleracea HOM05D010379 ORTHO05D012419 1.5e-49 199.5 128 84.4
BcaC07g37989 Brassica carinata HOM05D010379 ORTHO05D012419 5.6e-44 181.0 117 83.8
THA.LOC104815481 Tarenaya hassleriana HOM05D010379 ORTHO05D012419 5.8e-25 117.9 141 55.3
Aa31LG2G12520 Aethionema arabicum HOM05D010379 ORTHO05D012419 8.4e-24 114.0 139 51.8
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 1.9e-12 76.3 128 42.2
Potri.006G016500 Populus trichocarpa HOM05D004793 ORTHO05D004423 5.8e-09 64.7 138 35.5
Sabra06G0011800 Salix brachista HOM05D004793 ORTHO05D004423 1.7e-08 63.2 139 37.4
Ciclev10017072m.g Citrus clementina HOM05D004793 ORTHO05D004423 2.2e-08 62.8 151 36.4
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 4.9e-08 61.6 126 40.5
Duzib192G0740 Durio zibethinus HOM05D004793 ORTHO05D004423 6.4e-08 61.2 136 39.7
CSS0022938 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 8.4e-08 60.8 134 38.8
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.1e-07 60.5 139 36.0
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.4e-07 60.1 132 38.6
PGR004G1083 Punica granatum HOM05D004793 ORTHO05D004423 5.5e-07 58.2 143 39.2
Thecc.06G236700 Theobroma cacao HOM05D004793 ORTHO05D004423 7.1e-07 57.8 133 42.9
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 2.1e-06 56.2 138 36.2
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 2.7e-06 55.8 128 38.3
Eucgr.D01438 Eucalyptus grandis HOM05D004793 ORTHO05D004423 3.5e-06 55.5 142 36.6
Medtr4g133720 Medicago truncatula HOM05D004793 ORTHO05D004423 4.6e-06 55.1 92 44.6
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 6.0e-06 54.7 140 32.9
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 7.9e-06 54.3 127 33.9


User provided reference genes

Program Settings