Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G38530 Arabidopsis lyrata HOM05D005994 ORTHO05D007322 7.8e-55 216.9 107 100.0
Carub.0007s2505 Capsella rubella HOM05D005994 ORTHO05D007322 1.0e-54 216.5 106 100.0
Aa31LG2G12530 Aethionema arabicum HOM05D005994 ORTHO05D007322 2.3e-54 215.3 107 99.1
AT4G16450 Arabidopsis thaliana HOM05D005994 ORTHO05D007322 6.6e-54 213.8 107 99.1
BcaNung00192 Brassica carinata HOM05D005994 ORTHO05D007322 4.3e-53 211.1 107 96.3
A01p21090 Brassica napus HOM05D005994 ORTHO05D007322 4.3e-53 211.1 107 96.3
Thhalv10026636m.g Eutrema salsugineum HOM05D005994 ORTHO05D007322 1.2e-52 209.5 107 96.3
BcaC09g50351 Brassica carinata HOM05D005994 ORTHO05D007322 6.2e-52 207.2 107 94.4
BolC1t02582H Brassica oleracea HOM05D005994 ORTHO05D007322 6.2e-52 207.2 107 94.4
Sp7g15010 Schrenkiella parvula HOM05D005994 ORTHO05D007322 6.2e-52 207.2 107 94.4
C01p26360 Brassica napus HOM05D005994 ORTHO05D007322 1.4e-51 206.1 107 94.4
CARHR222840 Cardamine hirsuta HOM05D005994 ORTHO05D007322 8.9e-51 203.4 107 92.5
A03p49850 Brassica napus HOM05D005994 ORTHO05D007322 3.7e-49 198.0 104 94.2
C07p47910 Brassica napus HOM05D005994 ORTHO05D007322 3.7e-49 198.0 104 94.2
BolC7t45314H Brassica oleracea HOM05D005994 ORTHO05D007322 3.7e-49 198.0 104 94.2
BraA03t14080Z Brassica rapa HOM05D005994 ORTHO05D007322 3.7e-49 198.0 104 94.2
Duzib192G0253 Durio zibethinus HOM05D005994 ORTHO05D007322 1.4e-48 196.1 102 92.2
BcaC06g33480 Brassica carinata HOM05D005994 ORTHO05D007322 2.4e-48 195.3 105 92.4
Gohir.A06G204600 Gossypium hirsutum HOM05D005994 ORTHO05D007322 2.4e-48 195.3 102 90.2
THA.LOC104810390 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 2.4e-48 195.3 107 92.5
Gohir.D06G216900 Gossypium hirsutum HOM05D005994 ORTHO05D007322 3.2e-48 194.9 102 90.2
Gorai.010G249300 Gossypium raimondii HOM05D005994 ORTHO05D007322 9.2e-48 193.4 102 89.2
THA.LOC104815483 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 9.2e-48 193.4 103 93.2
Duzib235G0800 Durio zibethinus HOM05D005994 ORTHO05D007322 1.2e-47 193.0 102 91.2
COL.COLO4_07784 Corchorus olitorius HOM05D005994 ORTHO05D007322 1.6e-47 192.6 102 89.2
Thecc.06G236600 Theobroma cacao HOM05D005994 ORTHO05D007322 3.5e-47 191.4 102 88.2
arahy.Tifrunner.gnm1.ann1.CR688Y Arachis hypogaea HOM05D005994 ORTHO05D007322 7.8e-47 190.3 101 90.1
arahy.Tifrunner.gnm1.ann1.R43TP7 Arachis hypogaea HOM05D005994 ORTHO05D007322 7.8e-47 190.3 101 90.1
Potri.006G016300 Populus trichocarpa HOM05D005994 ORTHO05D007322 7.8e-47 190.3 102 88.2
Cc05_g14690 Coffea canephora HOM05D005994 ORTHO05D007322 3.9e-46 188.0 100 89.0
Manes.09G081660 Manihot esculenta HOM05D005994 ORTHO05D007322 3.9e-46 188.0 102 87.3
Sabra06G0011700 Salix brachista HOM05D005994 ORTHO05D007322 3.9e-46 188.0 101 88.1
MELO3C025540.2 Cucumis melo HOM05D005994 ORTHO05D007322 6.6e-46 187.2 100 89.0
HanXRQChr08g0213481 Helianthus annuus HOM05D005994 ORTHO05D007322 1.1e-45 186.4 100 88.0
Sed0000308 Sechium edule HOM05D005994 ORTHO05D007322 1.1e-45 186.4 100 89.0
ClCG01G010630 Citrullus lanatus HOM05D005994 ORTHO05D007322 1.9e-45 185.7 100 88.0
TWI63G1647 Tripterygium wilfordii HOM05D005994 ORTHO05D007322 1.9e-45 185.7 102 86.3
CANSAT56G3985 Cannabis sativa HOM05D005994 ORTHO05D007322 2.5e-45 185.3 100 90.0
Glyma.09G011900 Glycine max HOM05D005994 ORTHO05D007322 4.3e-45 184.5 101 86.1
Glyma.15G116500 Glycine max HOM05D005994 ORTHO05D007322 4.3e-45 184.5 101 86.1
Sed0000190 Sechium edule HOM05D005994 ORTHO05D007322 5.6e-45 184.1 100 88.0
VMungo0540G2179 Vigna mungo HOM05D005994 ORTHO05D007322 5.6e-45 184.1 101 87.1
PGR004G2260 Punica granatum HOM05D005994 ORTHO05D007322 7.3e-45 183.7 100 88.0
Hund23128 Selenicereus undatus HOM05D005994 ORTHO05D007322 7.3e-45 183.7 101 86.1
Ah.06g181210 Amaranthus hybridus HOM05D005994 ORTHO05D007322 9.5e-45 183.3 101 86.1
unitig_747.g21642 Utricularia gibba HOM05D005994 ORTHO05D007322 9.5e-45 183.3 101 85.1
AUR62017059 Chenopodium quinoa HOM05D005994 ORTHO05D007322 1.6e-44 182.6 101 87.1
AUR62040659 Chenopodium quinoa HOM05D005994 ORTHO05D007322 1.6e-44 182.6 101 87.1
Sc03g0008000 Simmondsia chinensis HOM05D005994 ORTHO05D007322 1.6e-44 182.6 100 87.0
EL10Ac4g07614 Beta vulgaris HOM05D005994 ORTHO05D007322 2.1e-44 182.2 101 87.1
Lj6g0002817 Lotus japonicus HOM05D005994 ORTHO05D007322 2.1e-44 182.2 101 85.1
Lalb_Chr03g0035721 Lupinus albus HOM05D005994 ORTHO05D007322 2.8e-44 181.8 100 86.0
Phvul.006G141600 Phaseolus vulgaris HOM05D005994 ORTHO05D007322 2.8e-44 181.8 101 86.1
Prupe.4G007400 Prunus persica HOM05D005994 ORTHO05D007322 2.8e-44 181.8 100 86.0
MSTRG.14470 Avicennia marina HOM05D005994 ORTHO05D007322 3.6e-44 181.4 100 85.0
FAN25G0933 Fragaria x ananassa HOM05D005994 ORTHO05D007322 3.6e-44 181.4 100 85.0
RcHm_v2.0_Chr5g0000881 Rosa chinensis HOM05D005994 ORTHO05D007322 3.6e-44 181.4 100 85.0
Nitab4.5_0000163g0320 Nicotiana tabacum HOM05D005994 ORTHO05D007322 4.7e-44 181.0 101 84.2
Haze_06972 Corylus avellana HOM05D005994 ORTHO05D007322 6.2e-44 180.6 100 85.0
TPR.G10599 Trifolium pratense HOM05D005994 ORTHO05D007322 6.2e-44 180.6 101 83.2
GSVIVG01037779001 Vitis vinifera HOM05D005994 ORTHO05D007322 6.2e-44 180.6 100 86.0
CSS0045306 Camellia sinensis var. sinensis HOM05D005994 ORTHO05D007322 8.1e-44 180.3 100 86.0
ECA246G1213 Erigeron canadensis HOM05D005994 ORTHO05D007322 8.1e-44 180.3 100 85.0
ATR0564G257 Amborella trichopoda HOM05D005994 ORTHO05D007322 1.1e-43 179.9 100 86.0
MD00G1058600 Malus domestica HOM05D005994 ORTHO05D007322 1.1e-43 179.9 100 85.0
Zm00001eb179550 Zea mays HOM05D005994 ORTHO05D007322 1.1e-43 179.9 101 84.2
CsaV3_1G017030 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.4e-43 179.5 94 91.5
CsaV3_UNG053450 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.4e-43 179.5 94 91.5
Migut.M01676 Erythranthe guttata HOM05D005994 ORTHO05D007322 1.4e-43 179.5 100 84.0
FAN21G1761 Fragaria x ananassa HOM05D005994 ORTHO05D007322 1.4e-43 179.5 100 84.0
Peaxi162Scf00955g00216 Petunia axillaris HOM05D005994 ORTHO05D007322 1.4e-43 179.5 100 85.0
Sopen07g033490 Solanum pennellii HOM05D005994 ORTHO05D007322 1.8e-43 179.1 96 88.5
Ciclev10016738m.g Citrus clementina HOM05D005994 ORTHO05D007322 2.4e-43 178.7 126 72.2
Lalb_Chr19g0129971 Lupinus albus HOM05D005994 ORTHO05D007322 2.4e-43 178.7 100 84.0
Medtr2g026500 Medicago truncatula HOM05D005994 ORTHO05D007322 2.4e-43 178.7 101 83.2
Nitab4.5_0001750g0060 Nicotiana tabacum HOM05D005994 ORTHO05D007322 2.4e-43 178.7 100 84.0
Rhsim06G0226700 Rhododendron simsii HOM05D005994 ORTHO05D007322 2.4e-43 178.7 100 84.0
Actinidia05033 Actinidia chinensis HOM05D005994 ORTHO05D007322 3.1e-43 178.3 100 84.0
Aqoxy4G02214 Aquilegia oxysepala HOM05D005994 ORTHO05D007322 3.1e-43 178.3 101 83.2
MSTRG.13010 Avicennia marina HOM05D005994 ORTHO05D007322 3.1e-43 178.3 100 83.0
SGA_v2.0_scaffold168G38531 Striga asiatica HOM05D005994 ORTHO05D007322 3.1e-43 178.3 100 84.0
CAN.G337.28 Capsicum annuum HOM05D005994 ORTHO05D007322 4.0e-43 177.9 96 88.5
MD10G1336200 Malus domestica HOM05D005994 ORTHO05D007322 4.0e-43 177.9 100 84.0
QL05p068624 Quercus lobata HOM05D005994 ORTHO05D007322 4.0e-43 177.9 100 83.0
QL05p068978 Quercus lobata HOM05D005994 ORTHO05D007322 4.0e-43 177.9 100 83.0
Solyc07g065275.1 Solanum lycopersicum HOM05D005994 ORTHO05D007322 4.0e-43 177.9 100 85.0
Os08g0431500 Oryza sativa ssp. japonica HOM05D005994 ORTHO05D007322 5.2e-43 177.6 99 85.9
Potri.016G009600 Populus trichocarpa HOM05D005994 ORTHO05D007322 5.2e-43 177.6 101 83.2
vmacro11561 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 5.2e-43 177.6 100 83.0
Ca_00743_v3 Cicer arietinum L. HOM05D005994 ORTHO05D007322 8.9e-43 176.8 101 83.2
Oeu005968.1 Olea europaea HOM05D005994 ORTHO05D007322 8.9e-43 176.8 100 83.0
CiPaw.10G079600 Carya illinoinensis HOM05D005994 ORTHO05D007322 1.2e-42 176.4 95 87.4
Eucgr.D00619 Eucalyptus grandis HOM05D005994 ORTHO05D007322 1.2e-42 176.4 99 83.8
Nitab4.5_0000461g0100 Nicotiana tabacum HOM05D005994 ORTHO05D007322 1.2e-42 176.4 99 83.8
Oeu005493.1 Olea europaea HOM05D005994 ORTHO05D007322 1.2e-42 176.4 100 82.0
PGSC0003DMG400022186 Solanum tuberosum HOM05D005994 ORTHO05D007322 1.2e-42 176.4 96 88.5
Actinidia00094 Actinidia chinensis HOM05D005994 ORTHO05D007322 2.0e-42 175.6 100 82.0
Cfa000074 Carpinus fangiana HOM05D005994 ORTHO05D007322 2.0e-42 175.6 100 83.0
vmacro09668 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 2.0e-42 175.6 100 82.0
Ah.04g166430 Amaranthus hybridus HOM05D000063 ORTHO05D000906 3.4e-42 174.9 94 88.3
Sabra16G0013400 Salix brachista HOM05D005994 ORTHO05D007322 3.4e-42 174.9 95 86.3
DCAR_013214 Daucus carota HOM05D005994 ORTHO05D007322 9.9e-42 173.3 100 80.0
FvH4_3g00660 Fragaria vesca HOM05D005994 ORTHO05D007322 9.9e-42 173.3 94 86.2
PSO832G1566 Papaver somniferum HOM05D005994 ORTHO05D007322 9.9e-42 173.3 100 81.0
Lsat_1_v5_gn_5_8041 Lactuca sativa HOM05D000063 ORTHO05D000906 2.2e-41 172.2 94 86.2
Psat1g178480 Pisum sativum HOM05D005994 ORTHO05D007322 2.2e-41 172.2 95 84.2
PSO063G2191 Papaver somniferum HOM05D005994 ORTHO05D007322 3.8e-41 171.4 100 80.0
CDE12G0176 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 4.9e-41 171.0 100 80.0
CDE01G0018 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 5.4e-40 167.5 100 80.0
MBI04_g07210_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 7.8e-39 163.7 94 81.9
HPP92_013264 Vanilla planifolia HOM05D005994 ORTHO05D007322 2.3e-38 162.2 99 75.8
Peaxi162Scf00285g00824 Petunia axillaris HOM05D005994 ORTHO05D007322 1.5e-34 149.4 104 72.1
Atru.chr1.2350 Acer truncatum HOM05D005994 ORTHO05D007322 9.9e-34 146.7 102 73.5
MBI04_g36325_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 2.5e-29 132.1 100 68.0
SEGI_25373 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 1.4e-27 126.3 79 73.4
Mapoly0008s0024 Marchantia polymorpha HOM05D005994 ORTHO05D007322 9.9e-26 120.2 93 61.3
Pp3c6_28950 Physcomitrium patens HOM05D005994 ORTHO05D007322 6.4e-25 117.5 93 58.1
SEGI_29999 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 1.0e-22 110.2 91 57.1
AagrBONN_evm.TU.Sc2ySwM_368.698 Anthoceros agrestis HOM05D005994 ORTHO05D007322 3.9e-22 108.2 93 52.7
AagrBONN_evm.TU.Sc2ySwM_117.3129 Anthoceros agrestis HOM05D005994 ORTHO05D007322 7.4e-21 104.0 92 53.3
CBR_g41406 Chara braunii HOM05D005994 ORTHO05D007322 9.6e-21 103.6 92 52.2
Cpa.g.sc3096.1 Carica papaya HOM05D005994 ORTHO05D007322 1.3e-20 103.2 60 81.7
MCO11G626 Micromonas commoda HOM05D005994 ORTHO05D007322 6.2e-20 100.9 91 54.9
Medtr2g097750 Medicago truncatula HOM05D005994 ORTHO05D007322 3.4e-18 95.1 59 76.3
TAR626G0394 Trochodendron aralioides HOM05D005994 ORTHO05D007322 4.9e-17 91.3 51 84.3
Nn5g27130 Nelumbo nucifera HOM05D005994 ORTHO05D007322 1.4e-16 89.7 52 80.8
SMO223G0003 Selaginella moellendorffii HOM05D005994 ORTHO05D007322 1.9e-16 89.4 89 50.6
HanXRQChr17g0564261 Helianthus annuus HOM05D005994 ORTHO05D007322 4.6e-15 84.7 48 81.2
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 5.1e-14 81.3 51 72.5
Dinv10313 Davidia involucrata HOM05D005994 ORTHO05D007322 1.1e-13 80.1 94 48.9
Zm00001eb041720 Zea mays HOM05D005994 ORTHO05D007322 1.3e-12 76.6 55 67.3
Nitab4.5_0005540g0030 Nicotiana tabacum HOM05D005994 ORTHO05D007322 8.2e-12 73.9 52 67.3
TAR627G0003 Trochodendron aralioides HOM05D005994 ORTHO05D007322 2.9e-09 65.5 43 74.4


User provided reference genes

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