Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.5e-121 439.5 214 100.0
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.6e-78 295.8 257 62.6
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 2.1e-67 259.6 262 55.0
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 3.6e-67 258.8 262 54.6
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 7.0e-63 244.6 262 50.8
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.7e-62 242.7 274 48.9
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 5.9e-62 241.5 262 51.5
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 5.9e-62 241.5 199 62.3
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-61 240.7 262 50.0
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 1.7e-61 240.0 262 51.1
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 2.1e-59 233.0 290 46.2
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 4.7e-59 231.9 213 57.3
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 8.0e-59 231.1 262 49.2
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 8.0e-59 231.1 250 50.0
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 1.0e-58 230.7 253 49.8
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 4.0e-58 228.8 261 49.4
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 8.8e-58 227.6 250 50.0
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 3.4e-57 225.7 239 51.9
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 3.4e-57 225.7 239 51.9
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 3.4e-57 225.7 272 48.9
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 4.4e-57 225.3 253 48.6
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 7.5e-57 224.6 261 49.8
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.3e-56 223.8 243 51.4
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 2.8e-56 222.6 245 49.4
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.1e-55 220.7 279 44.8
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 1.0e-53 214.2 263 46.4
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 5.0e-53 211.8 264 46.2
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 6.5e-53 211.5 276 46.4
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 1.9e-52 209.9 264 46.2
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 1.9e-52 209.9 264 46.2
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 8.8e-50 201.1 282 45.4
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 4.1e-47 192.2 248 45.2
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 4.1e-47 192.2 251 45.0
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-46 190.7 222 49.5
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 5.0e-45 185.3 247 46.6
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 5.0e-45 185.3 240 44.2
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 5.0e-45 185.3 214 46.7
BcaC06g33497 Brassica carinata HOM05D007337 ORTHO05D004972 4.3e-44 182.2 233 48.9
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 4.3e-44 182.2 240 44.2
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 7.3e-44 181.4 228 50.0
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 7.3e-44 181.4 228 50.0
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-43 180.6 256 42.2
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 1.2e-43 180.6 240 43.8
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-42 177.6 221 44.8
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 1.4e-42 177.2 229 47.6
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 3.0e-42 176.0 229 45.0
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 3.0e-42 176.0 229 45.0
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 5.2e-42 175.3 222 44.6
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 6.4e-40 168.3 238 43.7
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 8.3e-40 167.9 276 39.1
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 3.2e-39 166.0 228 46.5
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 5.9e-38 161.8 238 42.0
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 5.0e-37 158.7 218 46.8
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 2.8e-35 152.9 251 38.2
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 6.2e-35 151.8 251 39.4
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 1.0e-34 151.0 269 36.8
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-34 151.0 254 37.0
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 2.3e-34 149.8 231 39.0
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 8.9e-34 147.9 284 34.5
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 4.4e-33 145.6 282 35.1
BolC2t05997H Brassica oleracea HOM05D007337 ORTHO05D004972 5.8e-33 145.2 110 65.5
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-32 144.1 268 36.6
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 2.2e-32 143.3 276 35.1
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 6.4e-32 141.7 275 34.9
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-31 141.0 267 34.8
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 4.1e-31 139.0 282 34.8
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 9.2e-31 137.9 257 34.6
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.5e-30 136.0 284 34.2
Carub.0007s2492 Capsella rubella HOM05D007337 ORTHO05D004972 1.3e-29 134.0 98 68.4
C07p47990 Brassica napus HOM05D007337 ORTHO05D004972 1.7e-29 133.7 212 42.9
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 8.6e-29 131.3 234 38.0
BraA03t14092Z Brassica rapa HOM05D007337 ORTHO05D004972 1.1e-28 131.0 90 72.2
CARHR215530 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.1e-28 131.0 87 72.4
BcaC09g50367 Brassica carinata HOM05D007337 ORTHO05D004972 9.5e-28 127.9 88 69.3
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-27 127.5 231 39.4
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 1.6e-27 127.1 234 38.5
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 1.1e-26 124.4 241 36.9
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 5.8e-25 118.6 284 32.4
BolC7t45324H Brassica oleracea HOM05D007337 ORTHO05D004972 9.8e-25 117.9 245 36.3
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.7e-24 117.1 302 28.8
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 2.4e-23 113.2 244 35.2
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 2.4e-23 113.2 244 35.2
BraA03t14089Z Brassica rapa HOM05D007337 ORTHO05D004972 9.2e-23 111.3 243 35.8
A03p49970 Brassica napus HOM05D007337 ORTHO05D004972 7.8e-22 108.2 242 35.1
BcaNung00180 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-20 104.4 62 79.0
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 1.9e-20 103.6 209 35.4
BolC7t45322H Brassica oleracea HOM05D007337 ORTHO05D004972 5.6e-20 102.1 116 49.1
CARHR223010 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.2e-19 100.9 113 46.9
AT4G16540 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.1e-19 100.1 147 44.2
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 2.3e-18 96.7 272 30.5
BcaC06g34235 Brassica carinata HOM05D008086 ORTHO05D004972 3.4e-17 92.8 243 29.2
C07p31290 Brassica napus HOM05D008086 ORTHO05D004972 5.8e-17 92.0 243 29.6
BcaNung02867 Brassica carinata HOM05D007337 ORTHO05D004972 7.6e-17 91.7 92 52.2
CARHR173740 Cardamine hirsuta HOM05D008086 ORTHO05D004972 9.9e-17 91.3 202 30.7
BraA06t27366Z Brassica rapa HOM05D008086 ORTHO05D004972 1.3e-16 90.9 233 29.6
A06p44950 Brassica napus HOM05D008086 ORTHO05D004972 4.9e-16 89.0 232 29.3
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 6.4e-16 88.6 234 29.1
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 1.1e-15 87.8 234 29.1
C07p48020 Brassica napus HOM05D007337 ORTHO05D004972 1.9e-15 87.0 67 55.2
BolC7t45326H Brassica oleracea HOM05D007337 ORTHO05D004972 1.9e-15 87.0 67 55.2
BcaC06g31364 Brassica carinata HOM05D008086 ORTHO05D004972 3.2e-15 86.3 243 28.4
BcaC06g31366 Brassica carinata HOM05D008086 ORTHO05D004972 4.1e-15 85.9 233 28.3
BolC7t43666H Brassica oleracea HOM05D008086 ORTHO05D004972 5.4e-15 85.5 245 27.8
C07p31250 Brassica napus HOM05D008086 ORTHO05D004972 7.1e-15 85.1 244 28.3
QL12p012450 Quercus lobata HOM05D007337 ORTHO05D004972 9.2e-15 84.7 226 31.0
AL8G10360 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 1.6e-14 84.0 232 29.3
THA.LOC104798375 Tarenaya hassleriana HOM05D008086 ORTHO05D004972 2.1e-14 83.6 240 27.9
BcaC06g31356 Brassica carinata HOM05D008086 ORTHO05D004972 2.7e-14 83.2 266 26.3
BcaC06g34237 Brassica carinata HOM05D008086 ORTHO05D004972 3.5e-14 82.8 272 27.9
CARHR222970 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.0e-13 81.3 78 55.1
AL8G10380 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 1.3e-13 80.9 242 28.5
A06p44930 Brassica napus HOM05D008086 ORTHO05D004972 2.3e-13 80.1 245 27.8
BraA06t27364Z Brassica rapa HOM05D008086 ORTHO05D004972 2.3e-13 80.1 245 27.8
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 6.6e-13 78.6 262 28.2
CARHR173730 Cardamine hirsuta HOM05D008086 ORTHO05D004972 6.6e-13 78.6 245 26.1
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 8.6e-13 78.2 264 25.8
Carub.0008s0020 Capsella rubella HOM05D008086 ORTHO05D004972 8.6e-13 78.2 236 26.7
Aa31LG9G5430 Aethionema arabicum HOM05D008086 ORTHO05D004972 1.1e-12 77.8 227 30.0
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 1.9e-12 77.0 245 28.2
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 1.9e-12 77.0 245 28.2
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 1.9e-12 77.0 245 28.2
CARHR173760 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.9e-12 77.0 233 27.0
Thecc.03G253000 Theobroma cacao HOM05D008086 ORTHO05D004972 2.5e-12 76.6 66 53.0
BraA02t08035Z Brassica rapa HOM05D008086 ORTHO05D004972 5.6e-12 75.5 248 27.4
CARHR183270 Cardamine hirsuta HOM05D008086 ORTHO05D004972 5.6e-12 75.5 233 30.5
C07p30570 Brassica napus HOM05D008086 ORTHO05D004972 9.6e-12 74.7 265 25.7
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 1.2e-11 74.3 264 24.6
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 1.6e-11 73.9 264 24.6
AT4G16555 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.1e-11 73.6 82 48.8
BolC4t21835H Brassica oleracea HOM05D007337 ORTHO05D004972 2.1e-11 73.6 200 29.5
BolC4t21837H Brassica oleracea HOM05D007337 ORTHO05D004972 2.1e-11 73.6 200 29.5
BolC4t21838H Brassica oleracea HOM05D007337 ORTHO05D004972 2.1e-11 73.6 200 29.5
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 2.8e-11 73.2 269 25.7
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 2.8e-11 73.2 226 27.4
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 3.6e-11 72.8 268 26.1
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 4.7e-11 72.4 267 27.0
BraA02t08071Z Brassica rapa HOM05D008086 ORTHO05D004972 4.7e-11 72.4 235 28.1
BolC9t58045H Brassica oleracea HOM05D008086 ORTHO05D004972 8.1e-11 71.6 258 24.8
Thhalv10001213m.g Eutrema salsugineum HOM05D008086 ORTHO05D004972 1.4e-10 70.9 195 27.2
BcaC06g31429 Brassica carinata HOM05D008086 ORTHO05D004972 1.8e-10 70.5 269 25.3
C07p30540 Brassica napus HOM05D008086 ORTHO05D004972 2.4e-10 70.1 219 26.0
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 4.0e-10 69.3 233 27.5
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 6.9e-10 68.6 247 25.5
AT5G47590 Arabidopsis thaliana HOM05D008086 ORTHO05D004972 1.5e-09 67.4 48 58.3
BolC2t10843H Brassica oleracea HOM05D008086 ORTHO05D004972 4.4e-09 65.9 201 28.9
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 5.8e-09 65.5 210 27.1
CARHR174690 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.3e-08 64.3 47 57.4
BcaNung07056 Brassica carinata HOM05D008086 ORTHO05D004972 2.9e-08 63.2 194 28.4
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 3.8e-08 62.8 233 25.3
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 3.8e-08 62.8 245 25.7
A02p30190 Brassica napus HOM05D008086 ORTHO05D004972 3.2e-07 59.7 65 46.2
BcaC03g16909 Brassica carinata HOM05D008086 ORTHO05D004972 4.2e-07 59.3 45 55.6
BolC7t45323H Brassica oleracea HOM05D007337 ORTHO05D004972 1.6e-06 57.4 39 66.7
BcaB07g30809 Brassica carinata HOM05D008086 ORTHO05D004972 2.1e-06 57.0 206 25.7
Rhsim09G0039000 Rhododendron simsii HOM05D007337 ORTHO05D000958 4.6e-06 55.8 86 38.4


User provided reference genes

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