Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 7.9e-91 337.0 163 100.0
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 9.7e-65 250.4 122 95.9
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.3e-64 250.0 124 95.2
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 4.8e-64 248.1 130 90.8
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 1.7e-61 239.6 131 87.0
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 4.2e-60 235.0 131 84.0
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 4.7e-59 231.5 124 87.1
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 2.3e-58 229.2 133 85.0
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 2.6e-57 225.7 130 82.3
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 2.6e-57 225.7 130 82.3
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.7e-56 223.0 121 84.3
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 3.5e-54 215.3 125 82.4
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 3.8e-53 211.8 118 79.7
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 2.7e-51 205.7 120 76.7
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 2.7e-51 205.7 120 76.7
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 3.0e-50 202.2 122 77.9
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 1.1e-49 200.3 119 77.3
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 1.1e-49 200.3 120 76.7
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.0e-49 199.5 121 75.2
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 2.0e-49 199.5 119 76.5
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 4.4e-49 198.4 120 75.8
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 3.7e-48 195.3 125 76.0
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 6.3e-48 194.5 116 76.7
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 6.3e-48 194.5 138 67.4
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 8.2e-48 194.1 119 74.8
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 8.2e-48 194.1 122 75.4
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 1.1e-47 193.7 120 75.0
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.8e-47 193.0 119 72.3
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 2.4e-47 192.6 119 72.3
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.1e-47 192.2 125 74.4
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 5.3e-47 191.4 119 75.6
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.3e-47 191.4 125 73.6
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 9.1e-47 190.7 122 71.3
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 1.2e-46 190.3 119 72.3
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 1.2e-46 190.3 119 72.3
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 2.0e-46 189.5 120 75.0
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 4.5e-46 188.3 125 72.0
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 5.9e-46 188.0 119 73.1
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 5.9e-46 188.0 132 69.7
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 5.9e-46 188.0 118 72.9
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 1.7e-45 186.4 118 72.0
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 2.2e-45 186.0 120 70.8
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 2.2e-45 186.0 119 73.1
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 2.9e-45 185.7 119 70.6
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 2.9e-45 185.7 119 68.9
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 5.0e-45 184.9 128 71.9
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 5.0e-45 184.9 119 68.9
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 8.5e-45 184.1 122 71.3
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 8.5e-45 184.1 119 69.7
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 1.1e-44 183.7 128 69.5
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 1.5e-44 183.3 121 69.4
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 1.5e-44 183.3 125 71.2
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 1.9e-44 183.0 119 71.4
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 3.2e-44 182.2 119 70.6
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 3.2e-44 182.2 120 70.0
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 3.2e-44 182.2 118 69.5
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 4.2e-44 181.8 126 71.4
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 4.2e-44 181.8 125 66.4
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 5.5e-44 181.4 113 73.5
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 5.5e-44 181.4 119 67.2
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 5.5e-44 181.4 119 67.2
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 7.2e-44 181.0 119 68.9
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 1.2e-43 180.3 120 70.8
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 1.6e-43 179.9 120 69.2
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 2.1e-43 179.5 108 79.6
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 2.1e-43 179.5 111 78.4
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 2.1e-43 179.5 120 70.8
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 3.6e-43 178.7 119 70.6
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 4.7e-43 178.3 119 70.6
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 1.4e-42 176.8 103 81.6
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 6.8e-42 174.5 104 76.0
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 8.8e-42 174.1 120 67.5
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 4.4e-41 171.8 159 54.1
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 9.7e-41 170.6 144 59.7
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 9.7e-41 170.6 143 59.4
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 2.8e-40 169.1 133 66.9
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 3.1e-39 165.6 120 65.8
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 1.6e-38 163.3 101 76.2
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 1.3e-37 160.2 101 76.2
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 2.9e-37 159.1 114 70.2
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 1.1e-36 157.1 109 69.7
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 1.2e-35 153.7 136 58.8
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 2.7e-35 152.5 101 64.4
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 4.7e-35 151.8 92 76.1
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 3.7e-32 142.1 111 64.0
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 3.7e-32 142.1 162 48.8
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 8.3e-32 141.0 91 71.4
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 8.3e-32 141.0 116 60.3
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.1e-31 140.6 75 82.7
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 1.4e-31 140.2 96 70.8
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 1.4e-31 140.2 91 71.4
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 4.1e-31 138.7 90 70.0
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 1.6e-30 136.7 117 53.0
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 3.5e-30 135.6 116 53.4
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 3.8e-29 132.1 76 77.6
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 1.6e-27 126.7 119 47.9
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 3.6e-27 125.6 97 66.0
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.8e-26 123.2 80 72.5
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.0e-26 122.5 85 69.4
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 5.2e-26 121.7 117 53.0
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 2.6e-25 119.4 127 52.0
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 7.5e-25 117.9 155 46.5
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 5.9e-22 108.2 88 59.1
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 2.3e-21 106.3 100 48.0
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 2.9e-21 105.9 63 68.3
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 6.6e-21 104.8 67 76.1
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 2.1e-19 99.8 108 49.1
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 4.7e-19 98.6 130 46.2
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 1.0e-18 97.4 98 45.9
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 8.9e-18 94.4 63 69.8
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.0e-17 93.2 104 50.0
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 4.4e-17 92.0 61 68.9
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 3.0e-13 79.3 55 63.6
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.1e-12 77.4 54 68.5


User provided reference genes

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