Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G37770 Arabidopsis lyrata HOM05D004595 ORTHO05D005800 6.7e-69 263.8 129 100.0
Sp7g17210 Schrenkiella parvula HOM05D004595 ORTHO05D005800 2.6e-12 75.9 152 40.1
Thhalv10024346m.g Eutrema salsugineum HOM05D004595 ORTHO05D005800 7.5e-12 74.3 146 41.1
AT4G16970 Arabidopsis thaliana HOM05D004595 ORTHO05D005800 9.8e-12 73.9 146 39.7
AL7G37750 Arabidopsis lyrata HOM05D004595 ORTHO05D005800 1.3e-11 73.6 147 39.5
BcaNung00138 Brassica carinata HOM05D004595 ORTHO05D005800 2.9e-11 72.4 149 39.6
BcaC09g50431 Brassica carinata HOM05D004595 ORTHO05D005800 1.1e-10 70.5 149 39.6
C01p25500 Brassica napus HOM05D004595 ORTHO05D005800 1.4e-10 70.1 149 39.6
Carub.0007s2444 Capsella rubella HOM05D004595 ORTHO05D005800 4.1e-10 68.6 146 38.4
A01p20330 Brassica napus HOM05D004595 ORTHO05D005800 7.0e-10 67.8 33 90.9
BolC1t02501H Brassica oleracea HOM05D004595 ORTHO05D005800 7.0e-10 67.8 33 90.9
BraA01t01963Z Brassica rapa HOM05D004595 ORTHO05D005800 7.0e-10 67.8 33 90.9
FvH4_7g10370 Fragaria vesca HOM05D004595 ORTHO05D005800 7.0e-10 67.8 33 87.9
FAN01G2950 Fragaria x ananassa HOM05D004595 ORTHO05D005800 7.0e-10 67.8 33 87.9
FAN03G1267 Fragaria x ananassa HOM05D004595 ORTHO05D005800 7.0e-10 67.8 33 87.9
FAN06G0382 Fragaria x ananassa HOM05D004595 ORTHO05D005800 7.0e-10 67.8 33 87.9
FAN06G4364 Fragaria x ananassa HOM05D004595 ORTHO05D005800 7.0e-10 67.8 33 87.9
FAN10G2859 Fragaria x ananassa HOM05D004595 ORTHO05D005800 7.0e-10 67.8 33 87.9
QL04p029927 Quercus lobata HOM05D004595 ORTHO05D005800 7.0e-10 67.8 33 87.9
MD07G1109800 Malus domestica HOM05D004595 ORTHO05D005800 2.0e-09 66.2 33 84.8
THA.LOC104807924 Tarenaya hassleriana HOM05D004595 ORTHO05D005800 2.0e-09 66.2 33 87.9
Actinidia31498 Actinidia chinensis HOM05D004595 ORTHO05D005800 3.5e-09 65.5 62 54.8
CANSAT25G1576 Cannabis sativa HOM05D004595 ORTHO05D005800 4.6e-09 65.1 33 87.9
Oeu037379.1 Olea europaea HOM05D004595 ORTHO05D005800 4.6e-09 65.1 33 84.8
RcHm_v2.0_Chr1g0348071 Rosa chinensis HOM05D004595 ORTHO05D005800 4.6e-09 65.1 33 87.9
CsaV3_6G008680 Cucumis sativus L. HOM05D004595 ORTHO05D005800 6.0e-09 64.7 33 81.8
Sed0025323 Sechium edule HOM05D004595 ORTHO05D005800 6.0e-09 64.7 33 81.8
Dinv28866 Davidia involucrata HOM05D004595 ORTHO05D005800 1.0e-08 63.9 44 63.6
Aa31LG2G13050 Aethionema arabicum HOM05D004595 ORTHO05D005800 1.7e-08 63.2 33 81.8
Potri.001G151900 Populus trichocarpa HOM05D004595 ORTHO05D005800 1.7e-08 63.2 33 78.8
Sabra01G0121600 Salix brachista HOM05D004595 ORTHO05D005800 1.7e-08 63.2 33 78.8
Sabra03G0053300 Salix brachista HOM05D004595 ORTHO05D005800 1.7e-08 63.2 33 78.8
ClCG06G002450 Citrullus lanatus HOM05D004595 ORTHO05D005800 2.3e-08 62.8 32 81.2
Atru.chr9.1225 Acer truncatum HOM05D004595 ORTHO05D005800 3.0e-08 62.4 33 81.8
Cc08_g11470 Coffea canephora HOM05D004595 ORTHO05D005800 3.0e-08 62.4 33 75.8
Ciclev10018937m.g Citrus clementina HOM05D004595 ORTHO05D005800 3.9e-08 62.0 33 78.8
COL.COLO4_07512 Corchorus olitorius HOM05D004595 ORTHO05D005800 3.9e-08 62.0 33 78.8
Gohir.A11G028800 Gossypium hirsutum HOM05D004595 ORTHO05D005800 3.9e-08 62.0 33 78.8
Manes.01G087300 Manihot esculenta HOM05D004595 ORTHO05D005800 3.9e-08 62.0 33 78.8
EL10Ac5g12285 Beta vulgaris HOM05D004595 ORTHO05D005800 5.0e-08 61.6 33 81.8
Duzib205G1146 Durio zibethinus HOM05D004595 ORTHO05D005800 5.0e-08 61.6 86 40.7
QL12p009065 Quercus lobata HOM05D004595 ORTHO05D005800 5.0e-08 61.6 44 61.4
SalBow1G8649 Salvia bowleyana HOM05D004595 ORTHO05D005800 5.0e-08 61.6 33 78.8
MSTRG.1950 Avicennia marina HOM05D004595 ORTHO05D005800 6.6e-08 61.2 33 78.8
PSO063G2875 Papaver somniferum HOM05D004595 ORTHO05D005800 8.6e-08 60.8 33 78.8
PSO782G5445 Papaver somniferum HOM05D004595 ORTHO05D005800 8.6e-08 60.8 33 78.8
Rhsim07G0118300 Rhododendron simsii HOM05D004595 ORTHO05D005800 8.6e-08 60.8 33 75.8
Rhsim07G0118500 Rhododendron simsii HOM05D004595 ORTHO05D005800 8.6e-08 60.8 33 75.8
Glyma.07G115800 Glycine max HOM05D004595 ORTHO05D005800 1.1e-07 60.5 33 78.8
Prupe.5G058600 Prunus persica HOM05D004595 ORTHO05D005800 1.1e-07 60.5 33 75.8
SalBow1G1528 Salvia bowleyana HOM05D004595 ORTHO05D005800 1.1e-07 60.5 33 75.8
Lj2C227T10 Lonicera japonica HOM05D004595 ORTHO05D005800 1.5e-07 60.1 33 75.8
Phvul.010G046800 Phaseolus vulgaris HOM05D004595 ORTHO05D005800 1.5e-07 60.1 33 75.8
Potri.003G082600 Populus trichocarpa HOM05D004595 ORTHO05D005800 1.5e-07 60.1 33 72.7
CSS0009672 Camellia sinensis var. sinensis HOM05D004595 ORTHO05D005800 1.9e-07 59.7 33 75.8
Cpa.g.sc42.59 Carica papaya HOM05D004595 ORTHO05D005800 1.9e-07 59.7 33 75.8
Glyma.03G109300 Glycine max HOM05D004595 ORTHO05D005800 1.9e-07 59.7 33 75.8
Lsat_1_v5_gn_6_93760 Lactuca sativa HOM05D004595 ORTHO05D005800 1.9e-07 59.7 33 75.8
MBI04_g28359_MAGBIO Magnolia biondii HOM05D004595 ORTHO05D005800 1.9e-07 59.7 33 75.8
TWI60G0774 Tripterygium wilfordii HOM05D004595 ORTHO05D005800 1.9e-07 59.7 31 77.4
TAR375G0350 Trochodendron aralioides HOM05D004595 ORTHO05D005800 1.9e-07 59.7 33 75.8
arahy.Tifrunner.gnm1.ann1.F9ZABX Arachis hypogaea HOM05D004595 ORTHO05D005800 2.5e-07 59.3 33 72.7
arahy.Tifrunner.gnm1.ann1.XA3BYX Arachis hypogaea HOM05D004595 ORTHO05D005800 2.5e-07 59.3 33 72.7
CAN.G761.19 Capsicum annuum HOM05D004595 ORTHO05D005800 2.5e-07 59.3 44 56.8
SHI20412 Sapria himalayana HOM05D004595 ORTHO05D005800 2.5e-07 59.3 34 67.6
Hund14485 Selenicereus undatus HOM05D004595 ORTHO05D005800 2.5e-07 59.3 33 78.8
SGA_v2.0_scaffold20G09239 Striga asiatica HOM05D004595 ORTHO05D005800 2.5e-07 59.3 33 72.7
vmacro14128 Vaccinium macrocarpon HOM05D004595 ORTHO05D005800 2.5e-07 59.3 33 72.7
GSVIVG01018293001 Vitis vinifera HOM05D004595 ORTHO05D005800 2.5e-07 59.3 33 72.7
Aqoxy3G02685 Aquilegia oxysepala HOM05D004595 ORTHO05D005800 3.3e-07 58.9 33 75.8
ECA240G1307 Erigeron canadensis HOM05D004595 ORTHO05D005800 3.3e-07 58.9 44 52.3
Gohir.D11G027300 Gossypium hirsutum HOM05D004595 ORTHO05D005800 3.3e-07 58.9 33 75.8
Gorai.007G029800 Gossypium raimondii HOM05D004595 ORTHO05D005800 3.3e-07 58.9 33 75.8
Thecc.03G242900 Theobroma cacao HOM05D004595 ORTHO05D005800 3.3e-07 58.9 33 75.8
Lsat_1_v5_gn_3_85361 Lactuca sativa HOM05D004595 ORTHO05D005800 4.3e-07 58.5 50 54.0
PGR031G0135 Punica granatum HOM05D004595 ORTHO05D005800 4.3e-07 58.5 33 75.8
TAR004G0003 Trochodendron aralioides HOM05D004595 ORTHO05D005800 4.3e-07 58.5 33 72.7
Ca_14806_v3 Cicer arietinum L. HOM05D004595 ORTHO05D005800 5.6e-07 58.2 33 69.7
Gohir.A08G165500 Gossypium hirsutum HOM05D004595 ORTHO05D005800 5.6e-07 58.2 33 75.8
Gohir.D08G184200 Gossypium hirsutum HOM05D004595 ORTHO05D005800 5.6e-07 58.2 33 75.8
Gorai.004G193500 Gossypium raimondii HOM05D004595 ORTHO05D005800 5.6e-07 58.2 33 75.8
RcHm_v2.0_Chr7g0205281 Rosa chinensis HOM05D004595 ORTHO05D005800 5.6e-07 58.2 32 75.0
VMungo0331G1450 Vigna mungo HOM05D004595 ORTHO05D005800 5.6e-07 58.2 33 72.7
Zm00001eb391030 Zea mays HOM05D004595 ORTHO05D005800 5.6e-07 58.2 33 75.8
CSS0020169 Camellia sinensis var. sinensis HOM05D004595 ORTHO05D005800 7.3e-07 57.8 33 72.7
FvH4_5g20210 Fragaria vesca HOM05D004595 ORTHO05D005800 7.3e-07 57.8 32 71.9
FAN08G0032 Fragaria x ananassa HOM05D004595 ORTHO05D005800 7.3e-07 57.8 32 71.9
FAN13G0010 Fragaria x ananassa HOM05D004595 ORTHO05D005800 7.3e-07 57.8 32 71.9
FAN13G1547 Fragaria x ananassa HOM05D004595 ORTHO05D005800 7.3e-07 57.8 32 71.9
FAN18G0798 Fragaria x ananassa HOM05D004595 ORTHO05D005800 7.3e-07 57.8 32 71.9
CiPaw.11G069600 Carya illinoinensis HOM05D004595 ORTHO05D005800 9.5e-07 57.4 33 69.7
HanXRQChr13g0418201 Helianthus annuus HOM05D004595 ORTHO05D005800 9.5e-07 57.4 33 66.7
Nn1g08279 Nelumbo nucifera HOM05D004595 ORTHO05D005800 9.5e-07 57.4 33 72.7
Sc01g0008080 Simmondsia chinensis HOM05D004595 ORTHO05D005800 9.5e-07 57.4 33 72.7
Solyc08g077990.3 Solanum lycopersicum HOM05D004595 ORTHO05D005800 1.2e-06 57.0 33 66.7
CANSAT21G1292 Cannabis sativa HOM05D004595 ORTHO05D005800 1.6e-06 56.6 33 75.8
MD04G1051700 Malus domestica HOM05D004595 ORTHO05D005800 1.6e-06 56.6 30 76.7
Sopen08g026500 Solanum pennellii HOM05D004595 ORTHO05D005800 1.6e-06 56.6 33 66.7
PGSC0003DMG400026251 Solanum tuberosum HOM05D004595 ORTHO05D005800 1.6e-06 56.6 33 66.7
MD06G1048400 Malus domestica HOM05D004595 ORTHO05D005800 2.1e-06 56.2 33 72.7
CDE04G0694 Ceratophyllum demersum HOM05D004595 ORTHO05D005800 2.8e-06 55.8 33 69.7
AUR62007157 Chenopodium quinoa HOM05D004595 ORTHO05D005800 3.6e-06 55.5 33 72.7
AUR62018854 Chenopodium quinoa HOM05D004595 ORTHO05D005800 3.6e-06 55.5 33 72.7
HPP92_025687 Vanilla planifolia HOM05D004595 ORTHO05D005800 3.6e-06 55.5 32 75.0
Lalb_Chr12g0210541 Lupinus albus HOM05D004595 ORTHO05D005800 6.2e-06 54.7 30 70.0
GSVIVG01002113001 Vitis vinifera HOM05D004595 ORTHO05D005800 6.2e-06 54.7 33 69.7


User provided reference genes

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