Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 9.9e-70 266.9 161 100.0
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 1.7e-66 256.1 161 93.8
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 2.5e-65 252.3 161 86.3
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 1.4e-60 236.5 161 81.4
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 7.1e-60 234.2 161 86.3
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 3.5e-59 231.9 161 78.3
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 1.5e-57 226.5 161 79.5
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 3.3e-57 225.3 161 78.9
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 3.3e-57 225.3 161 85.1
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 4.3e-57 224.9 161 78.9
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 4.3e-57 224.9 161 78.3
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 2.1e-56 222.6 163 76.1
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 2.1e-56 222.6 161 77.6
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.1e-44 183.7 160 65.6
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 4.3e-41 171.8 155 63.2
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 4.3e-41 171.8 157 63.1
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 1.9e-36 156.4 155 56.1
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 3.2e-36 155.6 153 59.5
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 3.5e-35 152.1 128 61.7
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 7.9e-35 151.0 154 54.5
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 1.8e-34 149.8 150 54.7
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.8e-34 149.8 131 60.3
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 2.3e-34 149.4 139 57.6
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 6.7e-34 147.9 152 55.9
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 8.7e-34 147.5 159 52.2
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 8.7e-34 147.5 131 58.0
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 1.5e-33 146.7 161 52.8
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 2.5e-33 146.0 161 52.8
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 2.5e-33 146.0 136 57.4
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 3.3e-33 145.6 160 51.2
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 4.3e-33 145.2 131 58.8
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 5.7e-33 144.8 151 53.6
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 5.7e-33 144.8 126 61.1
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 7.4e-33 144.4 128 58.6
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 9.7e-33 144.1 154 52.6
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.3e-32 143.7 150 54.0
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 1.3e-32 143.7 150 54.0
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 1.3e-32 143.7 156 50.6
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.6e-32 143.3 152 54.6
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 2.2e-32 142.9 131 58.0
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 2.2e-32 142.9 140 55.7
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 2.8e-32 142.5 153 54.2
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 2.8e-32 142.5 117 63.2
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 3.7e-32 142.1 130 58.5
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 6.3e-32 141.4 127 57.5
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 6.3e-32 141.4 140 55.7
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 8.2e-32 141.0 135 57.0
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 1.1e-31 140.6 128 57.0
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.4e-31 140.2 145 54.5
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.4e-31 140.2 145 54.5
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.8e-31 139.8 130 56.2
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 1.8e-31 139.8 125 60.0
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 2.4e-31 139.4 161 50.3
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 2.4e-31 139.4 135 54.1
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 4.1e-31 138.7 131 55.0
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 5.3e-31 138.3 128 57.0
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 5.3e-31 138.3 158 49.4
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 6.9e-31 137.9 128 57.0
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 9.0e-31 137.5 128 56.2
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 9.0e-31 137.5 155 49.0
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 9.0e-31 137.5 126 54.0
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 9.0e-31 137.5 134 55.2
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 1.2e-30 137.1 148 52.0
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 1.2e-30 137.1 161 50.3
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 1.2e-30 137.1 134 56.0
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 2.0e-30 136.3 126 57.1
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 2.0e-30 136.3 112 62.5
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 2.6e-30 136.0 126 53.2
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 2.6e-30 136.0 156 48.7
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 3.4e-30 135.6 131 55.0
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 3.4e-30 135.6 159 50.3
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.4e-30 135.6 127 52.8
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 4.5e-30 135.2 145 49.7
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 4.5e-30 135.2 126 53.2
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 5.9e-30 134.8 125 55.2
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 1.0e-29 134.0 109 63.3
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.0e-29 134.0 145 52.4
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.7e-29 133.3 147 51.0
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 2.2e-29 132.9 131 52.7
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.2e-29 132.9 130 54.6
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 2.2e-29 132.9 130 54.6
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 2.9e-29 132.5 159 49.7
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.8e-29 132.1 131 51.9
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.8e-29 132.1 131 51.9
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 5.0e-29 131.7 162 51.2
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 6.5e-29 131.3 160 48.1
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 6.5e-29 131.3 128 54.7
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 8.5e-29 131.0 145 50.3
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 8.5e-29 131.0 152 50.0
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 1.4e-28 130.2 128 51.6
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 1.4e-28 130.2 128 51.6
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 1.4e-28 130.2 128 52.3
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 3.2e-28 129.0 125 55.2
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 4.2e-28 128.6 143 50.3
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 5.5e-28 128.3 128 51.6
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 3.6e-27 125.6 126 56.3
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 4.6e-27 125.2 131 49.6
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 6.1e-27 124.8 133 52.6
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 6.1e-27 124.8 150 50.0
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 6.1e-27 124.8 137 48.9
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 7.9e-27 124.4 117 56.4
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.3e-26 123.6 141 50.4
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 1.8e-26 123.2 139 49.6
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 6.7e-26 121.3 118 53.4
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 8.8e-26 120.9 153 45.1
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 4.3e-25 118.6 148 45.9
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 9.7e-25 117.5 162 42.6
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 4.8e-24 115.2 141 47.5
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.4e-23 113.6 151 46.4
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 3.4e-22 109.0 218 36.2
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 3.4e-22 109.0 148 43.9
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 4.5e-22 108.6 104 53.8
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 5.5e-20 101.7 112 49.1
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 9.4e-20 100.9 68 72.1
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.2e-19 100.5 67 73.1
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 2.0e-14 83.2 100 46.0
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 2.9e-13 79.3 110 38.2
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.4e-12 77.0 141 39.7
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.5e-12 76.3 140 40.0
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 3.6e-11 72.4 70 54.3
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.3e-08 63.9 105 38.1
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 1.2e-06 57.4 67 43.3


User provided reference genes

Program Settings