Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 1.1e-232 809.7 430 100.0
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 5.6e-205 717.6 434 88.2
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 6.0e-199 697.6 435 81.8
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 8.7e-198 693.7 435 81.4
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 3.4e-194 681.8 435 84.1
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 3.8e-193 678.3 435 83.2
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 1.0e-190 670.2 436 83.0
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 2.9e-177 625.5 428 79.2
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 1.9e-176 622.9 433 79.2
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 1.1e-163 580.5 404 73.5
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 9.8e-157 557.4 432 68.5
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 3.7e-148 528.9 444 61.7
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.1e-147 527.3 435 64.4
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 7.0e-147 524.6 443 60.3
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 1.2e-146 523.9 348 81.9
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 5.9e-146 521.5 428 61.2
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 7.8e-146 521.2 446 60.5
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 7.8e-146 521.2 442 64.9
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 5.0e-145 518.5 436 60.1
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 5.0e-145 518.5 439 60.4
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.1e-144 517.3 443 60.9
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.1e-144 517.3 436 61.5
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.5e-144 516.9 433 62.8
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 1.5e-144 516.9 440 61.4
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.9e-144 516.5 432 61.1
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.5e-144 516.2 438 61.0
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 2.8e-143 512.7 443 61.2
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 2.8e-143 512.7 443 59.6
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.7e-143 511.9 436 60.8
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.0e-142 510.8 433 62.1
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 1.4e-142 510.4 438 60.3
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 2.3e-142 509.6 454 58.8
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 6.8e-142 508.1 436 59.4
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 1.2e-141 507.3 442 58.1
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 2.0e-141 506.5 460 59.1
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 1.7e-140 503.4 430 58.6
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 3.7e-140 502.3 443 60.3
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 3.7e-140 502.3 440 59.1
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 6.4e-140 501.5 428 58.9
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 8.3e-140 501.1 428 58.9
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 1.1e-139 500.7 458 58.5
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 1.1e-139 500.7 446 63.7
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 1.4e-139 500.4 467 60.8
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 2.4e-139 499.6 439 62.9
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 3.2e-139 499.2 440 63.0
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.6e-138 496.9 437 59.7
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.0e-138 496.5 442 63.8
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 2.0e-138 496.5 434 60.1
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 2.0e-138 496.5 452 62.6
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 2.7e-138 496.1 444 59.0
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 6.0e-138 495.0 449 62.4
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 1.0e-137 494.2 451 57.9
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 1.1e-136 490.7 441 60.8
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 1.1e-136 490.7 452 58.0
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.5e-136 489.6 430 61.9
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 5.6e-136 488.4 456 60.3
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 7.3e-136 488.0 449 62.8
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 9.5e-136 487.6 458 60.0
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 9.5e-136 487.6 433 65.6
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 2.8e-135 486.1 443 59.1
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 2.3e-134 483.0 441 59.6
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 8.9e-134 481.1 433 57.5
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 2.0e-133 479.9 443 58.5
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 9.8e-133 477.6 446 55.8
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 3.7e-132 475.7 468 54.3
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 6.4e-132 474.9 446 55.8
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 8.3e-132 474.6 428 56.5
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 1.1e-131 474.2 301 74.8
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 1.4e-131 473.8 445 56.2
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 3.2e-131 472.6 437 61.1
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 4.1e-131 472.2 299 74.2
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 7.0e-131 471.5 449 55.9
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 6.0e-130 468.4 457 56.2
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.3e-129 467.2 299 74.6
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 5.1e-129 465.3 435 59.3
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 5.6e-128 461.8 429 56.4
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 2.8e-127 459.5 455 55.6
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 8.9e-126 454.5 428 55.6
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 3.4e-125 452.6 466 52.8
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 4.4e-125 452.2 483 51.6
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.7e-124 450.3 479 52.8
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 2.4e-123 446.4 442 55.4
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.6e-122 443.7 454 53.3
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 3.5e-122 442.6 298 70.8
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 6.0e-122 441.8 507 49.9
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 1.0e-121 441.0 443 53.5
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 7.3e-120 434.9 298 69.5
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.4e-118 430.6 401 57.6
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 2.7e-114 416.4 441 52.2
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 7.8e-114 414.8 295 65.8
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 3.9e-105 386.0 434 48.8
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 7.3e-104 381.7 389 58.6
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.6e-103 380.6 297 58.6
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.6e-103 380.6 297 58.6
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 4.8e-103 379.0 231 77.5
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 6.2e-103 378.6 297 59.6
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 5.3e-102 375.6 305 60.3
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 2.2e-100 370.2 417 48.7
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.1e-99 367.9 220 79.1
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.5e-96 356.7 375 56.3
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 1.4e-94 350.9 351 54.7
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 5.3e-94 349.0 263 62.7
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 5.5e-91 339.0 302 54.3
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 4.0e-86 322.8 203 74.9
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.0e-85 320.5 332 52.7
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 1.9e-83 313.9 346 54.3
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 8.8e-73 278.5 278 48.2
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 1.2e-66 258.1 278 44.2
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 5.9e-61 239.2 200 57.0
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 5.9e-61 239.2 200 57.0
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 2.6e-56 223.8 121 84.3
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 2.2e-52 210.7 140 70.7
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 3.4e-40 170.2 186 47.8
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 6.1e-34 149.4 252 38.9
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 1.2e-29 135.2 126 48.4
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.3e-28 131.7 70 85.7
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 3.9e-28 130.2 81 71.6
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 4.3e-27 126.7 109 55.0
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 4.1e-22 110.2 65 75.4
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 6.6e-20 102.8 94 47.9
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 3.3e-19 100.5 75 61.3
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 9.5e-19 99.0 53 81.1
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 5.1e-12 76.6 41 82.9
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 4.3e-11 73.6 120 30.0
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 2.6e-08 64.3 53 56.6
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 4.9e-07 60.1 57 50.9


User provided reference genes

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