Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G37270 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.5e-49 199.1 94 100.0
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.1e-15 86.7 83 50.6
Carub.0007s1219 Capsella rubella HOM05D000003 ORTHO05D000283 6.9e-15 84.0 82 48.8
BraA06t26517Z Brassica rapa HOM05D000003 ORTHO05D000283 1.7e-13 79.3 83 44.6
AT5G18880 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 2.2e-13 79.0 82 46.3
BcaB06g27122 Brassica carinata HOM05D000003 ORTHO05D000283 6.5e-13 77.4 84 45.2
BcaB01g03207 Brassica carinata HOM05D000003 ORTHO05D000283 2.5e-12 75.5 83 43.4
BolC5t30537H Brassica oleracea HOM05D000003 ORTHO05D000283 2.5e-12 75.5 83 49.4
AL8G14770 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 7.2e-12 73.9 83 43.4
Sp1g31420 Schrenkiella parvula HOM05D000003 ORTHO05D000283 1.2e-11 73.2 83 44.6
Carub.0005s1087 Capsella rubella HOM05D000003 ORTHO05D000283 1.4e-10 69.7 69 53.6
AL6G28130 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.8e-10 69.3 66 48.5
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 5.1e-10 67.8 83 41.0
BcaB04g17341 Brassica carinata HOM05D000003 ORTHO05D000283 6.7e-10 67.4 70 40.0
BcaB07g30964 Brassica carinata HOM05D000003 ORTHO05D000283 6.7e-10 67.4 83 42.2
BcaB06g25353 Brassica carinata HOM05D000003 ORTHO05D000283 8.8e-10 67.0 83 42.2
BraA06t23500Z Brassica rapa HOM05D000003 ORTHO05D000283 3.3e-09 65.1 83 41.0
BcaC03g13447 Brassica carinata HOM05D000003 ORTHO05D000283 5.7e-09 64.3 83 39.8
BcaNung03095 Brassica carinata HOM05D000003 ORTHO05D000283 5.7e-09 64.3 83 39.8
BcaB01g02113 Brassica carinata HOM05D000003 ORTHO05D000283 9.7e-09 63.5 83 37.3
BcaC03g18113 Brassica carinata HOM05D000003 ORTHO05D000283 9.7e-09 63.5 83 37.3
BcaC09g49882 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-08 63.2 83 39.8
BcaC04g21154 Brassica carinata HOM05D000003 ORTHO05D000283 1.7e-08 62.8 82 40.2
THA.LOC104801567 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.7e-08 62.8 70 41.4
BcaC07g42435 Brassica carinata HOM05D000003 ORTHO05D000283 6.3e-08 60.8 79 40.5
BcaC04g20827 Brassica carinata HOM05D000003 ORTHO05D000007 1.1e-07 60.1 62 46.8
BcaC01g00759 Brassica carinata HOM05D000003 ORTHO05D000004 1.4e-07 59.7 70 42.9
BcaB02g11468 Brassica carinata HOM05D000003 ORTHO05D000283 1.8e-07 59.3 63 44.4
BolC8t46826H Brassica oleracea HOM05D000003 ORTHO05D000283 1.8e-07 59.3 82 40.2
BolC8t51615H Brassica oleracea HOM05D000003 ORTHO05D000283 2.4e-07 58.9 82 40.2
THA.LOC104815125 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 5.3e-07 57.8 84 33.3
BcaB06g26408 Brassica carinata HOM05D000003 ORTHO05D000283 1.2e-06 56.6 82 39.0
BcaC07g39338 Brassica carinata HOM05D000003 ORTHO05D000007 1.5e-06 56.2 66 39.4
BcaB05g25304 Brassica carinata HOM05D000003 ORTHO05D000283 2.0e-06 55.8 63 39.7
BcaC02g07123 Brassica carinata HOM05D000003 ORTHO05D000283 2.0e-06 55.8 67 41.8
THA.LOC104825769 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.0e-06 55.8 85 32.9
BolC8t50095H Brassica oleracea HOM05D000003 ORTHO05D000004 5.9e-06 54.3 66 39.4
AL1G56270 Arabidopsis lyrata HOM05D005950 ORTHO05D000283 7.7e-06 53.9 81 34.6
BolC2t08124H Brassica oleracea HOM05D000003 ORTHO05D000283 7.7e-06 53.9 64 39.1
BraA01t01070Z Brassica rapa HOM05D000003 ORTHO05D000283 7.7e-06 53.9 82 40.2


User provided reference genes

Program Settings