Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G36880 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 7.9e-67 256.9 124 100.0
Carub.0007s3636 Capsella rubella HOM05D002679 ORTHO05D011194 2.2e-21 105.9 146 47.3
AL7G36480 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 6.1e-19 97.8 123 44.7
AL7G36510 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 6.1e-19 97.8 123 44.7
AL7G36490 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 4.0e-18 95.1 123 45.5
Carub.0007s2335 Capsella rubella HOM05D002679 ORTHO05D011194 5.2e-18 94.7 147 38.8
C02p64430 Brassica napus HOM05D002679 ORTHO05D011194 3.8e-13 78.6 135 40.7
BolC2t12507H Brassica oleracea HOM05D002679 ORTHO05D011194 5.0e-13 78.2 136 40.4
BcaNung03139 Brassica carinata HOM05D002679 ORTHO05D011194 7.2e-12 74.3 73 56.2
A02p02590 Brassica napus HOM05D018487 ORTHO05D011194 1.6e-11 73.2 128 38.3
BraA02t05227Z Brassica rapa HOM05D002679 ORTHO05D011194 1.6e-11 73.2 128 38.3
A07p13740 Brassica napus HOM05D002679 ORTHO05D010703 8.0e-11 70.9 142 34.5
BcaC03g13483 Brassica carinata HOM05D002679 ORTHO05D011194 1.0e-10 70.5 128 37.5
BcaC03g13479 Brassica carinata HOM05D002679 ORTHO05D011194 1.8e-10 69.7 125 37.6
BcaC03g13482 Brassica carinata HOM05D002679 ORTHO05D011194 1.8e-10 69.7 125 37.6
C02p06810 Brassica napus HOM05D002679 ORTHO05D011194 2.3e-10 69.3 128 37.5
C02p06800 Brassica napus HOM05D002679 ORTHO05D011194 3.0e-10 68.9 128 36.7
AL3G32930 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 4.0e-10 68.6 129 34.9
C02p06820 Brassica napus HOM05D002679 ORTHO05D011194 4.0e-10 68.6 125 36.8
C02p06870 Brassica napus HOM05D002679 ORTHO05D011194 4.0e-10 68.6 125 36.8
C02p06990 Brassica napus HOM05D002679 ORTHO05D011194 4.0e-10 68.6 125 36.8
C02p07030 Brassica napus HOM05D002679 ORTHO05D011194 4.0e-10 68.6 125 36.8
BolC2t06631H Brassica oleracea HOM05D002679 ORTHO05D011194 4.0e-10 68.6 125 36.8
AL1G49380 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 5.2e-10 68.2 145 37.2
AL1G49350 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 1.2e-09 67.0 143 37.8
BcaC09g52198 Brassica carinata HOM05D002666 ORTHO05D004769 1.2e-09 67.0 105 35.2
BcaC03g18368 Brassica carinata HOM05D002679 ORTHO05D011194 1.5e-09 66.6 106 39.6
BolC2t06633H Brassica oleracea HOM05D002679 ORTHO05D011194 1.5e-09 66.6 125 37.6
Carub.0003s1934 Capsella rubella HOM05D002679 ORTHO05D010703 2.6e-09 65.9 131 35.1
Carub.0003s1935 Capsella rubella HOM05D002679 ORTHO05D010703 2.6e-09 65.9 131 35.1
AL1G37710 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 3.4e-09 65.5 127 37.0
BcaC03g13474 Brassica carinata HOM05D002679 ORTHO05D011194 3.4e-09 65.5 87 48.3
C02p07050 Brassica napus HOM05D002679 ORTHO05D011194 7.5e-09 64.3 69 53.6
BcaB03g14132 Brassica carinata HOM05D002679 ORTHO05D010703 1.7e-08 63.2 131 33.6
C02p06910 Brassica napus HOM05D002679 ORTHO05D011194 1.7e-08 63.2 89 43.8
AL1G37670 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 2.8e-08 62.4 134 35.1
BcaC09g51773 Brassica carinata HOM05D002666 ORTHO05D004769 2.8e-08 62.4 134 29.9
AT4G17700 Arabidopsis thaliana HOM05D002679 ORTHO05D011194 3.7e-08 62.0 35 77.1
BcaC01g01195 Brassica carinata HOM05D002666 ORTHO05D004769 6.3e-08 61.2 120 35.8
BraA07t29124Z Brassica rapa HOM05D002679 ORTHO05D010703 6.3e-08 61.2 160 30.0
BcaC03g13476 Brassica carinata HOM05D002679 ORTHO05D011194 8.3e-08 60.8 73 47.9
BraA01t00770Z Brassica rapa HOM05D002666 ORTHO05D004769 8.3e-08 60.8 131 29.8
Carub.0007s2334 Capsella rubella HOM05D002679 ORTHO05D011194 1.8e-07 59.7 96 39.6
AT1G19060 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 5.4e-07 58.2 133 31.6
Aa31sc38G60 Aethionema arabicum HOM05D002666 ORTHO05D004769 7.0e-07 57.8 108 31.5
AL3G32940 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 7.0e-07 57.8 125 33.6
A01p08260 Brassica napus HOM05D002666 ORTHO05D004769 7.0e-07 57.8 131 28.2
C01p09230 Brassica napus HOM05D002666 ORTHO05D004769 7.0e-07 57.8 129 28.7
BraA01t00771Z Brassica rapa HOM05D002666 ORTHO05D004769 9.2e-07 57.4 131 29.0
AL1G37720 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.6e-06 56.6 135 34.1
C07p20140 Brassica napus HOM05D002679 ORTHO05D010703 2.0e-06 56.2 131 33.6
BolC7t42535H Brassica oleracea HOM05D002679 ORTHO05D010703 2.0e-06 56.2 131 33.6
CARHR272930 Cardamine hirsuta HOM05D002666 ORTHO05D004769 2.0e-06 56.2 131 31.3
C05p43390 Brassica napus HOM05D002679 ORTHO05D010703 2.7e-06 55.8 124 33.9
BcaC09g52197 Brassica carinata HOM05D002666 ORTHO05D004769 4.5e-06 55.1 71 36.6
C01p09250 Brassica napus HOM05D002666 ORTHO05D004769 4.5e-06 55.1 71 36.6
BolC1t00917H Brassica oleracea HOM05D002666 ORTHO05D004769 4.5e-06 55.1 71 36.6
BcaB03g14130 Brassica carinata HOM05D002679 ORTHO05D010703 7.7e-06 54.3 138 31.9
CARHR289130 Cardamine hirsuta HOM05D002666 ORTHO05D004769 7.7e-06 54.3 135 30.4


User provided reference genes

Program Settings