Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 3.0e-57 224.9 113 100.0
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 3.7e-55 218.0 113 94.7
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 3.1e-54 214.9 113 93.8
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 4.1e-54 214.5 113 94.7
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 2.9e-52 208.4 113 90.3
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 5.0e-52 207.6 112 89.3
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 1.9e-51 205.7 112 88.4
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 1.9e-51 205.7 112 88.4
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 1.9e-51 205.7 112 88.4
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 9.4e-51 203.4 113 89.4
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 9.4e-51 203.4 113 89.4
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 4.7e-50 201.1 111 90.1
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 5.2e-49 197.6 114 87.7
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 5.2e-49 197.6 114 87.7
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 1.5e-48 196.1 115 86.1
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 5.7e-48 194.1 112 85.7
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 7.5e-48 193.7 112 85.7
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 1.7e-47 192.6 115 85.2
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 1.7e-47 192.6 115 85.2
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 2.4e-46 188.7 118 82.2
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 1.6e-45 186.0 116 82.8
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 4.7e-42 174.5 114 72.8
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 6.1e-42 174.1 112 75.0
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 8.0e-42 173.7 112 73.2
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 2.3e-41 172.2 115 77.4
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 5.2e-41 171.0 111 74.8
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 6.8e-41 170.6 110 73.6
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 1.5e-40 169.5 113 75.2
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 4.4e-40 167.9 112 72.3
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 9.8e-40 166.8 105 77.1
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 2.2e-39 165.6 99 76.8
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 2.8e-39 165.2 112 69.6
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 3.7e-39 164.9 111 70.3
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 4.8e-39 164.5 106 75.5
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 4.8e-39 164.5 112 72.3
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 8.3e-39 163.7 112 70.5
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.1e-38 163.3 111 69.4
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 1.1e-38 163.3 112 71.4
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 4.1e-38 161.4 111 71.2
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 5.4e-38 161.0 100 79.0
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 9.1e-38 160.2 116 71.6
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 1.2e-37 159.8 109 72.5
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 1.2e-37 159.8 94 73.4
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.6e-37 159.5 90 81.1
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 2.7e-37 158.7 89 82.0
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 2.7e-37 158.7 112 69.6
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 4.5e-37 157.9 92 78.3
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 1.0e-36 156.8 116 69.8
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 1.0e-36 156.8 120 66.7
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.0e-36 156.8 121 66.1
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 1.3e-36 156.4 97 70.1
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 1.7e-36 156.0 113 69.0
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 1.7e-36 156.0 112 69.6
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 2.2e-36 155.6 117 69.2
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.2e-36 155.6 112 70.5
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 2.2e-36 155.6 97 73.2
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 2.2e-36 155.6 115 70.4
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 2.9e-36 155.2 113 69.9
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 3.8e-36 154.8 113 70.8
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 5.0e-36 154.5 113 68.1
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 6.5e-36 154.1 95 74.7
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 8.5e-36 153.7 115 69.6
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 2.5e-35 152.1 112 65.2
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 3.2e-35 151.8 90 75.6
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 4.2e-35 151.4 116 69.0
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 7.2e-35 150.6 87 80.5
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 9.5e-35 150.2 114 63.2
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 1.6e-34 149.4 112 65.2
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.1e-34 149.1 120 62.5
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 2.8e-34 148.7 112 67.9
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 6.1e-34 147.5 89 76.4
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 1.4e-33 146.4 89 76.4
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 1.8e-33 146.0 87 77.0
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 2.3e-33 145.6 88 76.1
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 8.8e-33 143.7 87 73.6
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 8.8e-33 143.7 89 75.3
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 1.2e-32 143.3 89 76.4
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 1.2e-32 143.3 76 85.5
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 4.4e-32 141.4 88 69.3
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 9.8e-32 140.2 106 63.2
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 1.3e-31 139.8 90 68.9
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 1.3e-31 139.8 102 60.8
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 2.2e-31 139.0 86 70.9
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 2.2e-31 139.0 76 82.9
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 4.9e-31 137.9 91 68.1
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 6.3e-31 137.5 116 62.9
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 1.4e-30 136.3 114 60.5
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 7.0e-30 134.0 107 65.4
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 7.0e-30 134.0 94 64.9
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 9.2e-30 133.7 87 69.0
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.2e-29 133.3 79 74.7
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 3.5e-29 131.7 76 77.6
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 4.5e-29 131.3 76 80.3
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 4.5e-29 131.3 105 60.0
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 5.9e-29 131.0 77 76.6
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 7.8e-29 130.6 82 74.4
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 1.5e-27 126.3 93 67.7
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.9e-27 125.9 101 65.3
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 4.3e-27 124.8 89 65.2
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 1.3e-23 113.2 97 54.6
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 2.9e-23 112.1 97 49.5
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 2.4e-22 109.0 110 47.3
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 4.6e-21 104.8 87 54.0
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 6.2e-18 94.4 76 56.6
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 1.7e-15 86.3 55 72.7
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 1.0e-12 77.0 110 35.5
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 3.9e-12 75.1 112 41.1


User provided reference genes

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