Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G35510 Arabidopsis lyrata HOM05D008010 ORTHO05D010085 5.2e-134 481.1 250 100.0
AT4G18740 Arabidopsis thaliana HOM05D008010 ORTHO05D010085 3.3e-96 355.5 233 83.3
CARHR225590 Cardamine hirsuta HOM05D008010 ORTHO05D010085 8.4e-60 234.6 203 69.5
BcaNung05918 Brassica carinata HOM05D008010 ORTHO05D010085 5.3e-46 188.7 234 56.0
C01p12720 Brassica napus HOM05D008010 ORTHO05D010085 1.5e-45 187.2 236 57.6
A01p10760 Brassica napus HOM05D008010 ORTHO05D010085 5.0e-44 182.2 234 55.1
BraA01t01022Z Brassica rapa HOM05D008010 ORTHO05D010085 8.5e-44 181.4 234 54.7
BolC1t01249H Brassica oleracea HOM05D008010 ORTHO05D010085 1.1e-43 181.0 236 55.1
BcaC09g51471 Brassica carinata HOM05D008010 ORTHO05D010085 9.4e-43 177.9 235 55.3
Thhalv10026132m.g Eutrema salsugineum HOM05D008010 ORTHO05D010085 1.1e-38 164.5 231 49.8
Carub.0007s2250 Capsella rubella HOM05D008010 ORTHO05D010085 1.8e-33 147.1 169 59.8
Sp7g17440 Schrenkiella parvula HOM05D008010 ORTHO05D010085 5.2e-33 145.6 233 46.8
THA.LOC104806163 Tarenaya hassleriana HOM05D008010 ORTHO05D010085 5.7e-32 142.1 233 48.1
Aa31LG6G1450 Aethionema arabicum HOM05D008010 ORTHO05D010085 1.7e-31 140.6 241 43.6
Dinv12764 Davidia involucrata HOM05D008010 ORTHO05D010085 1.7e-20 104.0 166 47.6
Sabra11G0057100 Salix brachista HOM05D008010 ORTHO05D010085 4.7e-18 95.9 207 42.0
Sabra11G0053600 Salix brachista HOM05D004193 ORTHO05D004862 2.3e-17 93.6 184 41.8
Haze_06192 Corylus avellana HOM05D008010 ORTHO05D010085 3.0e-17 93.2 156 44.9
Cfa000638 Carpinus fangiana HOM05D008010 ORTHO05D010085 6.8e-17 92.0 156 44.9
Nn3g21124 Nelumbo nucifera HOM05D008010 ORTHO05D010085 6.8e-17 92.0 216 38.0
PGR031G1466 Punica granatum HOM05D008010 ORTHO05D010085 1.2e-16 91.3 200 40.5
GSVIVG01021245001 Vitis vinifera HOM05D008010 ORTHO05D010085 2.0e-16 90.5 185 39.5
CiPaw.09G071800 Carya illinoinensis HOM05D008010 ORTHO05D010085 3.4e-16 89.7 174 40.2
Potri.011G069300 Populus trichocarpa HOM05D008010 ORTHO05D010085 4.4e-16 89.4 159 44.0
Duzib160G0139 Durio zibethinus HOM05D008010 ORTHO05D010085 4.8e-15 85.9 181 39.8
Nitab4.5_0008462g0010 Nicotiana tabacum HOM05D008010 ORTHO05D010085 4.8e-15 85.9 206 36.9
Manes.16G041900 Manihot esculenta HOM05D008010 ORTHO05D010085 6.3e-15 85.5 210 37.6
Sed0009144 Sechium edule HOM05D008010 ORTHO05D010085 2.4e-14 83.6 193 36.3
RcHm_v2.0_Chr5g0011411 Rosa chinensis HOM05D008010 ORTHO05D010085 3.1e-14 83.2 186 39.2
Eucgr.D00477 Eucalyptus grandis HOM05D008010 ORTHO05D010085 4.1e-14 82.8 182 34.6
Potri.004G059300 Populus trichocarpa HOM05D008010 ORTHO05D010085 4.1e-14 82.8 175 41.7
DCAR_027988 Daucus carota HOM05D008010 ORTHO05D010085 5.4e-14 82.4 166 38.0
Prupe.4G065300 Prunus persica HOM05D008010 ORTHO05D010085 5.4e-14 82.4 193 38.3
PGSC0003DMG401028427 Solanum tuberosum HOM05D004193 ORTHO05D004862 9.1e-14 81.6 197 37.1
Nitab4.5_0002185g0010 Nicotiana tabacum HOM05D008010 ORTHO05D010085 1.6e-13 80.9 205 36.6
Thecc.06G167300 Theobroma cacao HOM05D008010 ORTHO05D010085 2.0e-13 80.5 163 38.7
Cpa.g.sc7.102 Carica papaya HOM05D008010 ORTHO05D010085 2.7e-13 80.1 161 39.1
ClCG03G007530 Citrullus lanatus HOM05D008010 ORTHO05D010085 2.7e-13 80.1 186 35.5
CAN.G411.60 Capsicum annuum HOM05D008010 ORTHO05D010085 3.5e-13 79.7 205 37.1
Gohir.A06G132400 Gossypium hirsutum HOM05D008010 ORTHO05D010085 4.5e-13 79.3 204 34.3
Sopen02g021240 Solanum pennellii HOM05D008010 ORTHO05D010085 4.5e-13 79.3 193 35.8
FvH4_3g07440 Fragaria vesca HOM05D008010 ORTHO05D010085 5.9e-13 79.0 209 37.3
Lj6g0013702 Lotus japonicus HOM05D008010 ORTHO05D010085 5.9e-13 79.0 186 37.1
Cc02_g15430 Coffea canephora HOM05D008010 ORTHO05D010085 7.7e-13 78.6 233 34.3
FAN21G0683 Fragaria x ananassa HOM05D008010 ORTHO05D010085 1.0e-12 78.2 208 36.5
FAN25G1163 Fragaria x ananassa HOM05D008010 ORTHO05D010085 1.0e-12 78.2 209 37.3
FAN16G3557 Fragaria x ananassa HOM05D008010 ORTHO05D010085 1.3e-12 77.8 155 41.9
Solyc02g072260.4 Solanum lycopersicum HOM05D008010 ORTHO05D010085 2.3e-12 77.0 156 39.1
Lsat_1_v5_gn_1_109280 Lactuca sativa HOM05D008010 ORTHO05D010085 2.9e-12 76.6 198 36.4
Gorai.010G160200 Gossypium raimondii HOM05D008010 ORTHO05D010085 3.8e-12 76.3 204 33.8
Peaxi162Scf00371g00017 Petunia axillaris HOM05D008010 ORTHO05D010085 5.0e-12 75.9 179 38.5
Migut.M01016 Erythranthe guttata HOM05D008010 ORTHO05D010085 6.5e-12 75.5 187 33.2
arahy.Tifrunner.gnm1.ann1.NGY302 Arachis hypogaea HOM05D008010 ORTHO05D010085 1.1e-11 74.7 172 39.5
Gohir.D06G137900 Gossypium hirsutum HOM05D008010 ORTHO05D010085 1.1e-11 74.7 163 37.4
Atru.chr10.1588_Atru.chr10.1589 Acer truncatum HOM05D008010 ORTHO05D010085 1.5e-11 74.3 220 35.0
Lalb_Chr18g0054681 Lupinus albus HOM05D008010 ORTHO05D010085 1.9e-11 73.9 166 37.3
arahy.Tifrunner.gnm1.ann1.42QDDD Arachis hypogaea HOM05D008010 ORTHO05D010085 3.2e-11 73.2 172 39.5
MELO3C002669.2 Cucumis melo HOM05D008010 ORTHO05D010085 3.2e-11 73.2 167 36.5
MD05G1297000 Malus domestica HOM05D008010 ORTHO05D010085 7.2e-11 72.0 177 34.5
Ah.14g087050 Amaranthus hybridus HOM05D004193 ORTHO05D004862 1.6e-10 70.9 163 35.6
QL05p048352 Quercus lobata HOM05D008010 ORTHO05D010085 1.6e-10 70.9 192 33.3
AUR62027705 Chenopodium quinoa HOM05D008010 ORTHO05D010085 3.6e-10 69.7 166 33.7
CsaV3_1G033180 Cucumis sativus L. HOM05D008010 ORTHO05D010085 8.0e-10 68.6 180 33.3
AUR62039459 Chenopodium quinoa HOM05D008010 ORTHO05D010085 1.4e-09 67.8 167 33.5
Ciclev10016384m.g Citrus clementina HOM05D008010 ORTHO05D010085 1.8e-09 67.4 146 39.0
Aqoxy1G02001 Aquilegia oxysepala HOM05D004193 ORTHO05D004862 4.0e-09 66.2 170 36.5
CDE03G0033 Ceratophyllum demersum HOM05D008010 ORTHO05D010085 6.8e-09 65.5 232 31.0
EL10Ac8g20573 Beta vulgaris HOM05D008010 ORTHO05D010085 1.5e-08 64.3 227 32.2
ECA248G1583 Erigeron canadensis HOM05D000006 ORTHO05D000091 9.8e-08 61.6 168 36.3
ATR0127G032 Amborella trichopoda HOM05D008010 ORTHO05D010085 1.1e-06 58.2 164 36.6
SGA_v2.0_scaffold1G00067 Striga asiatica HOM05D008010 ORTHO05D010085 1.8e-06 57.4 190 31.6


User provided reference genes

Program Settings