Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G34810 Arabidopsis lyrata HOM05D007367 ORTHO05D008866 5.8e-95 350.9 181 100.0
AT4G19350 Arabidopsis thaliana HOM05D007367 ORTHO05D008866 4.3e-82 308.1 181 87.8
Carub.0007s2188 Capsella rubella HOM05D007367 ORTHO05D008866 1.1e-77 293.5 181 83.4
CARHR226150 Cardamine hirsuta HOM05D007367 ORTHO05D008866 9.1e-72 273.9 181 79.0
Sp7g17960 Schrenkiella parvula HOM05D007367 ORTHO05D008866 1.1e-69 266.9 181 75.7
BcaNung01789 Brassica carinata HOM05D007367 ORTHO05D008866 4.2e-61 238.4 181 67.4
BolC1t01302H Brassica oleracea HOM05D007367 ORTHO05D008866 5.5e-61 238.0 181 66.9
BcaC09g51422 Brassica carinata HOM05D007367 ORTHO05D008866 1.2e-60 236.9 181 66.9
A01p11220 Brassica napus HOM05D007367 ORTHO05D008866 2.0e-58 229.6 181 64.6
BraA01t01068Z Brassica rapa HOM05D007367 ORTHO05D008866 7.5e-58 227.6 181 64.1
C01p13270 Brassica napus HOM05D007367 ORTHO05D008866 1.2e-55 220.3 171 66.7
THA.LOC104811080 Tarenaya hassleriana HOM05D007367 ORTHO05D008866 6.1e-52 208.0 178 61.2
Aa31LG6G1950 Aethionema arabicum HOM05D007367 ORTHO05D008866 4.0e-51 205.3 182 61.0
Actinidia32792 Actinidia chinensis HOM05D007367 ORTHO05D008866 8.3e-41 171.0 170 54.1
Ciclev10012881m.g Citrus clementina HOM05D007367 ORTHO05D008866 1.1e-40 170.6 155 58.1
Thhalv10026808m.g Eutrema salsugineum HOM05D007367 ORTHO05D008866 1.6e-39 166.8 112 77.7
COL.COLO4_16748 Corchorus olitorius HOM05D007367 ORTHO05D008866 4.5e-39 165.2 163 54.0
Sc07g0008020 Simmondsia chinensis HOM05D007367 ORTHO05D008866 1.3e-38 163.7 170 50.6
Manes.10G067900 Manihot esculenta HOM05D007367 ORTHO05D008866 2.9e-38 162.5 177 52.5
ClCG07G011120 Citrullus lanatus HOM05D007367 ORTHO05D008866 5.0e-38 161.8 171 53.2
CiPaw.11G074200 Carya illinoinensis HOM05D007367 ORTHO05D008866 1.1e-37 160.6 176 51.1
Duzib068G0439 Durio zibethinus HOM05D007367 ORTHO05D008866 1.9e-37 159.8 159 56.0
Cfa012305 Carpinus fangiana HOM05D007367 ORTHO05D008866 3.3e-37 159.1 159 54.1
MELO3C016218.2 Cucumis melo HOM05D007367 ORTHO05D008866 4.7e-36 155.2 166 50.0
Prupe.5G013300 Prunus persica HOM05D007367 ORTHO05D008866 6.1e-36 154.8 154 53.9
Thecc.03G320300 Theobroma cacao HOM05D007367 ORTHO05D008866 6.1e-36 154.8 163 52.1
TWI38G2056 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 6.1e-36 154.8 170 52.9
Dinv37431 Davidia involucrata HOM05D007367 ORTHO05D008866 8.0e-36 154.5 159 54.1
Gohir.D12G204000 Gossypium hirsutum HOM05D007367 ORTHO05D008866 1.0e-35 154.1 159 52.8
SGA_v2.0_scaffold89G27372 Striga asiatica HOM05D007367 ORTHO05D008866 1.0e-35 154.1 160 51.2
QL93p0143_0020 Quercus lobata HOM05D007367 ORTHO05D008866 1.4e-35 153.7 159 51.6
GSVIVG01036886001 Vitis vinifera HOM05D007367 ORTHO05D008866 1.8e-35 153.3 160 52.5
Cc08_g05930 Coffea canephora HOM05D007367 ORTHO05D008866 4.0e-35 152.1 175 49.1
MD03G1130300 Malus domestica HOM05D007367 ORTHO05D008866 4.0e-35 152.1 154 52.6
QL12p003620 Quercus lobata HOM05D007367 ORTHO05D008866 4.0e-35 152.1 159 50.9
Potri.004G235300 Populus trichocarpa HOM05D007367 ORTHO05D008866 5.2e-35 151.8 155 52.9
EL10Ac8g19394 Beta vulgaris HOM05D007367 ORTHO05D008866 1.2e-34 150.6 177 45.8
Gorai.008G218800 Gossypium raimondii HOM05D007367 ORTHO05D008866 1.2e-34 150.6 152 53.9
RcHm_v2.0_Chr7g0215331 Rosa chinensis HOM05D007367 ORTHO05D008866 2.6e-34 149.4 159 50.9
Gohir.A12G201200 Gossypium hirsutum HOM05D007367 ORTHO05D008866 4.4e-34 148.7 159 51.6
SalBow4G0967 Salvia bowleyana HOM05D007367 ORTHO05D008866 4.4e-34 148.7 163 49.7
Migut.A00520 Erythranthe guttata HOM05D007367 ORTHO05D008866 5.8e-34 148.3 157 49.7
TWI38G0281 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 5.8e-34 148.3 170 50.0
CsaV3_4G007130 Cucumis sativus L. HOM05D007367 ORTHO05D008866 7.5e-34 147.9 160 50.6
Lsat_1_v5_gn_5_43721 Lactuca sativa HOM05D007367 ORTHO05D008866 1.3e-33 147.1 163 49.1
Glyma.02G045600 Glycine max HOM05D007367 ORTHO05D008866 1.1e-32 144.1 159 47.8
Glyma.16G123600 Glycine max HOM05D007367 ORTHO05D008866 1.4e-32 143.7 159 47.2
Nn1g01985 Nelumbo nucifera HOM05D007367 ORTHO05D008866 2.4e-32 142.9 155 51.0
Lj4g0011102 Lotus japonicus HOM05D007367 ORTHO05D008866 3.2e-32 142.5 159 45.9
Sed0007825 Sechium edule HOM05D007367 ORTHO05D008866 3.2e-32 142.5 152 52.6
TAR374G1177 Trochodendron aralioides HOM05D007367 ORTHO05D008866 5.4e-32 141.7 156 50.0
CANSAT01G1692 Cannabis sativa HOM05D007367 ORTHO05D008866 2.0e-31 139.8 153 50.3
ECA246G3716 Erigeron canadensis HOM05D007367 ORTHO05D008866 2.0e-31 139.8 153 47.1
MSTRG.25748 Avicennia marina HOM05D007367 ORTHO05D008866 2.7e-31 139.4 164 48.2
FvH4_5g25140 Fragaria vesca HOM05D007367 ORTHO05D008866 1.7e-30 136.7 159 46.5
Lalb_Chr16g0391641 Lupinus albus HOM05D007367 ORTHO05D008866 3.0e-30 136.0 164 44.5
Solyc12g096170.2 Solanum lycopersicum HOM05D007367 ORTHO05D008866 3.0e-30 136.0 166 47.6
FAN13G0070 Fragaria x ananassa HOM05D007367 ORTHO05D008866 8.6e-30 134.4 159 45.9
Sopen12g032050 Solanum pennellii HOM05D007367 ORTHO05D008866 1.1e-29 134.0 166 47.0
Aqoxy7G01946 Aquilegia oxysepala HOM05D000773 ORTHO05D008866 1.5e-29 133.7 152 45.4
FAN08G2564 Fragaria x ananassa HOM05D007367 ORTHO05D008866 3.3e-29 132.5 159 45.3
VMungo0251G1728 Vigna mungo HOM05D007367 ORTHO05D008866 3.3e-29 132.5 152 44.7
Medtr8g075140 Medicago truncatula HOM05D007367 ORTHO05D008866 4.3e-29 132.1 154 42.2
CDE02G0575 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 5.6e-29 131.7 161 45.3
HanXRQChr02g0034081 Helianthus annuus HOM05D007367 ORTHO05D008866 2.1e-28 129.8 152 45.4
Sabra01G0179900 Salix brachista HOM05D000929 ORTHO05D004813 3.6e-28 129.0 157 45.9
arahy.Tifrunner.gnm1.ann1.H9MF1T Arachis hypogaea HOM05D007367 ORTHO05D008866 1.1e-27 127.5 159 41.5
CAN.G947.33 Capsicum annuum HOM05D007367 ORTHO05D008866 1.8e-27 126.7 157 44.6
Zm00001eb415480 Zea mays HOM05D007367 ORTHO05D008866 3.1e-27 125.9 150 46.7
TPR.G19504 Trifolium pratense HOM05D007367 ORTHO05D008866 4.0e-27 125.6 154 42.2
vmacro00097 Vaccinium macrocarpon HOM05D007367 ORTHO05D008866 4.0e-27 125.6 226 37.2
Peaxi162Scf00876g00431 Petunia axillaris HOM05D007367 ORTHO05D008866 5.2e-27 125.2 166 45.2
Psat4g102200 Pisum sativum HOM05D007367 ORTHO05D008866 1.5e-26 123.6 159 42.1
PSO063G4690 Papaver somniferum HOM05D007367 ORTHO05D008866 4.4e-26 122.1 152 44.7
Atru.chr8.2637 Acer truncatum HOM05D007367 ORTHO05D008866 7.5e-26 121.3 158 44.9
Phvul.003G266000 Phaseolus vulgaris HOM05D007367 ORTHO05D008866 9.8e-26 120.9 174 39.7
PGR042G2818 Punica granatum HOM05D007367 ORTHO05D008866 3.7e-25 119.0 165 42.4
AUR62030407 Chenopodium quinoa HOM05D007367 ORTHO05D008866 8.3e-25 117.9 173 42.8
unitig_748.g8147 Utricularia gibba HOM05D007367 ORTHO05D008866 1.1e-24 117.5 173 38.7
Os08g0162500 Oryza sativa ssp. japonica HOM05D007367 ORTHO05D008866 7.0e-24 114.8 160 41.2
arahy.Tifrunner.gnm1.ann1.I4PABW Arachis hypogaea HOM05D007367 ORTHO05D008866 9.2e-24 114.4 187 36.4
Ah.09g231810 Amaranthus hybridus HOM05D007367 ORTHO05D008866 1.6e-23 113.6 171 41.5
PGSC0003DMG400029288 Solanum tuberosum HOM05D007367 ORTHO05D008866 4.6e-23 112.1 179 41.9
Hund14309 Selenicereus undatus HOM05D007367 ORTHO05D008866 1.7e-22 110.2 185 41.6
FAN04G0859 Fragaria x ananassa HOM05D007367 ORTHO05D008866 2.3e-22 109.8 159 40.9
FAN18G1407 Fragaria x ananassa HOM05D007367 ORTHO05D008866 1.9e-21 106.7 159 40.3
PSO675G5685 Papaver somniferum HOM05D007367 ORTHO05D008866 5.6e-21 105.1 118 45.8
DCAR_002187 Daucus carota HOM05D007367 ORTHO05D008866 2.8e-20 102.8 106 54.7
HPP92_022724 Vanilla planifolia HOM05D007367 ORTHO05D008866 1.4e-19 100.5 151 39.1
CDE11G0580 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 8.9e-19 97.8 126 45.2
Haze_08425 Corylus avellana HOM05D007367 ORTHO05D008866 5.4e-16 88.6 90 56.7
Oeu046776.1 Olea europaea HOM05D007367 ORTHO05D008866 9.2e-16 87.8 91 50.5
Thecc.04G178000 Theobroma cacao HOM05D000090 ORTHO05D001322 2.3e-14 83.2 78 57.7
Eucgr.E01150 Eucalyptus grandis HOM05D007367 ORTHO05D008866 1.5e-13 80.5 84 53.6
Nitab4.5_0011129g0040 Nicotiana tabacum HOM05D007367 ORTHO05D008866 1.9e-13 80.1 131 38.2
Actinidia01248 Actinidia chinensis HOM05D007367 ORTHO05D008866 3.3e-13 79.3 87 52.9
Cpa.g.sc103.6 Carica papaya HOM05D007367 ORTHO05D008866 3.1e-11 72.8 70 55.7
Atru.chr8.2641 Acer truncatum HOM05D007367 ORTHO05D008866 2.6e-10 69.7 93 47.3
Nitab4.5_0001913g0180 Nicotiana tabacum HOM05D007367 ORTHO05D008866 1.7e-09 67.0 99 41.4
DCAR_002186 Daucus carota HOM05D007367 ORTHO05D008866 6.4e-09 65.1 70 51.4
Atru.chr8.2644 Acer truncatum HOM05D007367 ORTHO05D008866 1.9e-08 63.5 69 55.1
SHI32769 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-08 62.4 68 52.9
Oeu046774.1 Olea europaea HOM05D007367 ORTHO05D008866 1.0e-06 57.8 61 50.8
Gohir.A08G148800 Gossypium hirsutum HOM05D036757 ORTHO05D048069 8.7e-06 54.7 93 40.9


User provided reference genes

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