Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G33930 Arabidopsis lyrata HOM05D008198 ORTHO05D010220 4.0e-66 254.6 126 100.0
AT4G19980 Arabidopsis thaliana HOM05D008198 ORTHO05D010220 4.6e-54 214.5 128 84.4
Thhalv10026564m.g Eutrema salsugineum HOM05D008198 ORTHO05D010220 1.6e-51 206.1 128 78.9
Carub.0007s2117 Capsella rubella HOM05D008198 ORTHO05D010220 2.0e-49 199.1 129 80.6
Sp7g18430 Schrenkiella parvula HOM05D008198 ORTHO05D010220 5.8e-49 197.6 127 76.4
BcaNung01739 Brassica carinata HOM05D008198 ORTHO05D010220 1.3e-48 196.4 127 75.6
A01p11780 Brassica napus HOM05D008198 ORTHO05D010220 1.3e-48 196.4 127 75.6
BraA01t01120Z Brassica rapa HOM05D008198 ORTHO05D010220 1.3e-48 196.4 127 75.6
CARHR226750 Cardamine hirsuta HOM05D008198 ORTHO05D010220 1.1e-47 193.4 127 79.5
C01p13980 Brassica napus HOM05D008198 ORTHO05D010220 1.7e-45 186.0 127 72.4
BolC1t01365H Brassica oleracea HOM05D008198 ORTHO05D010220 1.7e-45 186.0 127 72.4
BcaC09g51355 Brassica carinata HOM05D008198 ORTHO05D010220 3.0e-45 185.3 127 72.4
C03p82100 Brassica napus HOM05D008198 ORTHO05D010220 4.7e-35 151.4 127 63.8
BolC3t20547H Brassica oleracea HOM05D008198 ORTHO05D010220 4.7e-35 151.4 127 63.8
Aa31LG6G2390 Aethionema arabicum HOM05D008198 ORTHO05D010220 1.7e-21 106.3 104 61.5
Sabra03G0076400 Salix brachista HOM05D008198 ORTHO05D010220 1.3e-16 90.1 95 52.6
RcHm_v2.0_Chr5g0020591 Rosa chinensis HOM05D008198 ORTHO05D010220 2.2e-16 89.4 93 54.8
VMungo0251G3138 Vigna mungo HOM05D008198 ORTHO05D010220 2.2e-16 89.4 110 54.5
Gorai.005G268000 Gossypium raimondii HOM05D008198 ORTHO05D010220 8.4e-16 87.4 109 43.1
Thecc.02G006400 Theobroma cacao HOM05D008198 ORTHO05D010220 1.1e-15 87.0 85 51.8
Gohir.D02G239700 Gossypium hirsutum HOM05D008198 ORTHO05D010220 1.4e-15 86.7 109 43.1
Atru.chr10.441 Acer truncatum HOM05D008198 ORTHO05D010220 1.9e-15 86.3 78 51.3
Potri.001G123300 Populus trichocarpa HOM05D008198 ORTHO05D010220 1.9e-15 86.3 92 52.2
FAN21G2662 Fragaria x ananassa HOM05D008198 ORTHO05D010220 2.4e-15 85.9 111 47.7
Duzib248G0575 Durio zibethinus HOM05D008198 ORTHO05D010220 5.4e-15 84.7 74 52.7
Glyma.05G131701 Glycine max HOM05D008198 ORTHO05D010220 5.4e-15 84.7 104 53.8
Manes.03G073400 Manihot esculenta HOM05D008198 ORTHO05D010220 5.4e-15 84.7 111 47.7
Prupe.4G115000 Prunus persica HOM05D008198 ORTHO05D010220 7.1e-15 84.3 94 50.0
COL.COLO4_17639 Corchorus olitorius HOM05D008198 ORTHO05D010220 1.6e-14 83.2 123 42.3
Gohir.A03G217600 Gossypium hirsutum HOM05D008198 ORTHO05D010220 2.1e-14 82.8 90 45.6
Sabra01G0095000 Salix brachista HOM05D008198 ORTHO05D010220 3.5e-14 82.0 92 52.2
Phvul.002G191200 Phaseolus vulgaris HOM05D008198 ORTHO05D010220 4.6e-14 81.6 70 62.9
FvH4_3g12620 Fragaria vesca HOM05D008198 ORTHO05D010220 1.0e-13 80.5 79 51.9
FAN25G2935 Fragaria x ananassa HOM05D008198 ORTHO05D010220 1.0e-13 80.5 79 51.9
Lalb_Chr07g0188441 Lupinus albus HOM05D008198 ORTHO05D010220 1.0e-13 80.5 69 62.3
ClCG01G025660 Citrullus lanatus HOM05D008198 ORTHO05D010220 1.3e-13 80.1 96 46.9
QL11p013556 Quercus lobata HOM05D008198 ORTHO05D010220 1.3e-13 80.1 84 52.4
Haze_06107 Corylus avellana HOM05D008198 ORTHO05D010220 2.3e-13 79.3 90 54.4
CSS0019680 Camellia sinensis var. sinensis HOM05D008198 ORTHO05D010220 3.0e-13 79.0 67 61.2
CiPaw.09G074800 Carya illinoinensis HOM05D008198 ORTHO05D010220 3.9e-13 78.6 93 52.7
Ciclev10017172m.g Citrus clementina HOM05D008198 ORTHO05D010220 5.1e-13 78.2 124 41.1
Potri.003G110200 Populus trichocarpa HOM05D008198 ORTHO05D010220 1.1e-12 77.0 75 56.0
Lj4g0024937 Lotus japonicus HOM05D008198 ORTHO05D010220 1.5e-12 76.6 67 65.7
MD10G1229700 Malus domestica HOM05D008198 ORTHO05D010220 1.9e-12 76.3 95 48.4
Nn7g38206 Nelumbo nucifera HOM05D008198 ORTHO05D010220 1.9e-12 76.3 101 45.5
Actinidia22419 Actinidia chinensis HOM05D008198 ORTHO05D010220 4.3e-12 75.1 65 61.5
TPR.G11001 Trifolium pratense HOM05D008198 ORTHO05D010220 5.6e-12 74.7 89 55.1
Glyma.08G086200 Glycine max HOM05D008198 ORTHO05D010220 9.6e-12 73.9 93 55.9
MD05G1249200 Malus domestica HOM05D008198 ORTHO05D010220 9.6e-12 73.9 96 44.8
Dinv09067 Davidia involucrata HOM05D008198 ORTHO05D010220 1.3e-11 73.6 90 51.1
Eucgr.L01648 Eucalyptus grandis HOM05D008198 ORTHO05D010220 1.3e-11 73.6 71 54.9
Cfa000688 Carpinus fangiana HOM05D008198 ORTHO05D010220 1.6e-11 73.2 88 54.5
TWI38G1073 Tripterygium wilfordii HOM05D008198 ORTHO05D010220 3.6e-11 72.0 75 53.3
Ca_18253_v3 Cicer arietinum L. HOM05D008198 ORTHO05D010220 4.8e-11 71.6 98 45.9
Medtr4g094640 Medicago truncatula HOM05D008198 ORTHO05D010220 8.1e-11 70.9 71 57.7
Sed0017835 Sechium edule HOM05D008198 ORTHO05D010220 8.1e-11 70.9 94 45.7
SalBow8G3784 Salvia bowleyana HOM05D008198 ORTHO05D010220 1.1e-10 70.5 62 59.7
PGSC0003DMG400010446 Solanum tuberosum HOM05D008198 ORTHO05D010220 1.1e-10 70.5 96 51.0
Sopen02g017700 Solanum pennellii HOM05D008198 ORTHO05D010220 1.8e-10 69.7 83 51.8
CiPaw.10G063000 Carya illinoinensis HOM05D008198 ORTHO05D010220 2.4e-10 69.3 110 45.5
Lalb_Chr04g0257791 Lupinus albus HOM05D008198 ORTHO05D010220 1.2e-09 67.0 70 55.7
Psat7g089000 Pisum sativum HOM05D008198 ORTHO05D010220 2.6e-09 65.9 64 59.4
Oeu058939.1 Olea europaea HOM05D008198 ORTHO05D010220 3.4e-09 65.5 95 46.3
SGA_v2.0_scaffold298G47697 Striga asiatica HOM05D008198 ORTHO05D010220 6.4e-08 61.2 74 52.7
Migut.M01995 Erythranthe guttata HOM05D008198 ORTHO05D010220 4.2e-07 58.5 79 48.1
Os06g0666800 Oryza sativa ssp. japonica HOM05D019633 ORTHO05D010220 2.1e-06 56.2 94 37.2
Cpa.g.sc30.141 Carica papaya HOM05D008198 ORTHO05D010220 6.0e-06 54.7 51 51.0


User provided reference genes

Program Settings