Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G33860 Arabidopsis lyrata HOM05D009858 ORTHO05D011870 1.0e-114 416.8 210 100.0
AT4G20000 Arabidopsis thaliana HOM05D009858 ORTHO05D011870 2.0e-94 349.4 208 87.0
CARHR226780 Cardamine hirsuta HOM05D009858 ORTHO05D011870 3.7e-85 318.5 214 80.4
Thhalv10026244m.g Eutrema salsugineum HOM05D009858 ORTHO05D011870 6.4e-85 317.8 210 79.5
Carub.0007s2113 Capsella rubella HOM05D009858 ORTHO05D011870 1.6e-83 313.2 220 79.1
Sp7g18460 Schrenkiella parvula HOM05D009858 ORTHO05D011870 1.7e-77 293.1 211 75.4
BcaNung01737 Brassica carinata HOM05D009858 ORTHO05D011870 2.9e-77 292.4 212 74.1
BcaC09g51353 Brassica carinata HOM05D009858 ORTHO05D011870 1.7e-74 283.1 212 71.7
C01p14010 Brassica napus HOM05D009858 ORTHO05D011870 3.9e-74 282.0 212 71.7
BolC1t01368H Brassica oleracea HOM05D009858 ORTHO05D011870 3.9e-74 282.0 212 71.7
A01p11810 Brassica napus HOM05D009858 ORTHO05D011870 1.5e-73 280.0 212 71.7
BraA01t01123Z Brassica rapa HOM05D009858 ORTHO05D011870 1.5e-73 280.0 212 71.7
C03p82680 Brassica napus HOM05D009858 ORTHO05D011870 8.3e-69 264.2 212 69.3
BolC3t20549H Brassica oleracea HOM05D009858 ORTHO05D011870 8.3e-69 264.2 212 69.3
BcaC01g00649 Brassica carinata HOM05D009858 ORTHO05D011870 1.9e-68 263.1 212 68.9
BcaB03g11653 Brassica carinata HOM05D009858 ORTHO05D011870 1.6e-67 260.0 213 69.5
Thhalv10001232m.g Eutrema salsugineum HOM05D009858 ORTHO05D011870 1.0e-34 151.0 215 47.9
Aa31LG6G2430 Aethionema arabicum HOM05D004352 ORTHO05D000003 7.6e-30 134.8 149 57.0
THA.LOC104806220 Tarenaya hassleriana HOM05D009858 ORTHO05D011870 1.8e-26 123.6 217 41.0
A02p28730 Brassica napus HOM05D009858 ORTHO05D011870 1.0e-18 97.8 151 45.7
C02p45430 Brassica napus HOM05D009858 ORTHO05D011870 1.4e-18 97.4 151 45.7
BraA02t07908Z Brassica rapa HOM05D009858 ORTHO05D011870 1.4e-18 97.4 151 45.7
Carub.0008s0347 Capsella rubella HOM05D009858 ORTHO05D011870 2.0e-17 93.6 228 37.7
BolC2t10569H Brassica oleracea HOM05D009858 ORTHO05D011870 3.3e-17 92.8 151 44.4
BcaC03g16705 Brassica carinata HOM05D009858 ORTHO05D011870 5.7e-17 92.0 108 52.8
THA.LOC104806977 Tarenaya hassleriana HOM05D009858 ORTHO05D011870 5.9e-14 82.0 183 39.3
BcaB07g30491 Brassica carinata HOM05D009858 ORTHO05D011870 2.1e-11 73.6 158 40.5
Haze_06156 Corylus avellana HOM05D003807 ORTHO05D002847 8.2e-08 61.6 106 49.1
Haze_06157 Corylus avellana HOM05D003807 ORTHO05D002847 1.4e-07 60.8 122 43.4
CANSAT35G1226 Cannabis sativa HOM05D003807 ORTHO05D002847 1.8e-07 60.5 162 33.3
Dinv31174 Davidia involucrata HOM05D003807 ORTHO05D002847 2.4e-07 60.1 78 50.0
QL11p012767 Quercus lobata HOM05D003807 ORTHO05D002847 1.5e-06 57.4 113 39.8
Glyma.09G051900 Glycine max HOM05D003807 ORTHO05D002847 2.0e-06 57.0 61 59.0
Cfa000664 Carpinus fangiana HOM05D003807 ORTHO05D002847 2.6e-06 56.6 140 39.3
SGA_v2.0_scaffold175G39345 Striga asiatica HOM05D003807 ORTHO05D002847 2.6e-06 56.6 93 43.0
Ciclev10016595m.g Citrus clementina HOM05D003807 ORTHO05D002847 7.7e-06 55.1 225 32.0
Manes.03G074500 Manihot esculenta HOM05D003807 ORTHO05D002847 7.7e-06 55.1 92 44.6
Peaxi162Scf00199g00093 Petunia axillaris HOM05D003807 ORTHO05D002847 7.7e-06 55.1 80 47.5


User provided reference genes

Program Settings