Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G33470 Arabidopsis lyrata HOM05D010395 ORTHO05D012583 1.8e-67 259.2 143 100.0
AL7G33450 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.1e-64 250.0 143 96.5
AT4G20420 Arabidopsis thaliana HOM05D010395 ORTHO05D012583 1.0e-57 226.9 143 88.8
Carub.0007s2074 Capsella rubella HOM05D010395 ORTHO05D012583 7.7e-50 200.7 143 82.5
CARHR227250 Cardamine hirsuta HOM05D010395 ORTHO05D012583 6.1e-47 191.0 144 76.4
Sp7g18780 Schrenkiella parvula HOM05D010395 ORTHO05D012583 1.7e-41 172.9 144 72.2
A03p52430 Brassica napus HOM05D010395 ORTHO05D012583 5.7e-37 157.9 145 71.0
A01p12110 Brassica napus HOM05D010395 ORTHO05D012583 1.1e-35 153.7 145 62.8
BraA01t01154Z Brassica rapa HOM05D010395 ORTHO05D012583 1.1e-35 153.7 145 62.8
BolC1t01399H Brassica oleracea HOM05D010395 ORTHO05D012583 2.4e-35 152.5 145 64.8
BraA03t14322Z Brassica rapa HOM05D010395 ORTHO05D012583 3.1e-35 152.1 145 67.6
C07p50890 Brassica napus HOM05D010395 ORTHO05D012583 4.1e-35 151.8 145 68.3
BolC7t45587H Brassica oleracea HOM05D010395 ORTHO05D012583 4.1e-35 151.8 145 68.3
Thhalv10026545m.g Eutrema salsugineum HOM05D010395 ORTHO05D012583 7.8e-34 147.5 99 78.8
BcaC01g00670 Brassica carinata HOM05D010395 ORTHO05D012583 2.3e-33 146.0 145 64.1
C03p82940 Brassica napus HOM05D010395 ORTHO05D012583 2.3e-33 146.0 145 64.1
BolC3t20577H Brassica oleracea HOM05D010395 ORTHO05D012583 2.3e-33 146.0 145 64.1
C01p14420 Brassica napus HOM05D010395 ORTHO05D012583 3.8e-33 145.2 145 64.1
BcaB03g11673 Brassica carinata HOM05D010395 ORTHO05D012583 1.5e-32 143.3 144 60.4
A08p14880 Brassica napus HOM05D010395 ORTHO05D012583 2.1e-31 139.4 145 62.8
BraA08t33471Z Brassica rapa HOM05D010395 ORTHO05D012583 2.1e-31 139.4 145 62.8
Sp2g09330 Schrenkiella parvula HOM05D009819 ORTHO05D011938 2.0e-13 79.7 140 40.0
CARHR178570 Cardamine hirsuta HOM05D009819 ORTHO05D011938 6.4e-12 74.7 140 37.1
Thhalv10001188m.g Eutrema salsugineum HOM05D009819 ORTHO05D011938 4.1e-11 72.0 139 39.6
BcaC06g31608 Brassica carinata HOM05D009819 ORTHO05D011938 5.4e-11 71.6 141 39.0
BcaB07g30520 Brassica carinata HOM05D009819 ORTHO05D011938 1.6e-10 70.1 92 47.8
BolC2t10545H Brassica oleracea HOM05D009819 ORTHO05D011938 1.6e-10 70.1 85 48.2
AT5G44540 Arabidopsis thaliana HOM05D009819 ORTHO05D011938 2.7e-10 69.3 140 36.4
A02p28450 Brassica napus HOM05D009819 ORTHO05D011938 3.5e-10 68.9 85 50.6
BraA02t07880Z Brassica rapa HOM05D009819 ORTHO05D011938 3.5e-10 68.9 85 50.6
C07p27410 Brassica napus HOM05D009819 ORTHO05D011938 4.6e-10 68.6 93 46.2
BolC7t43271H Brassica oleracea HOM05D009819 ORTHO05D011938 4.6e-10 68.6 93 46.2
BcaC06g34541 Brassica carinata HOM05D009819 ORTHO05D011938 1.0e-09 67.4 93 45.2
Carub.0008s0396 Capsella rubella HOM05D009819 ORTHO05D011938 1.3e-09 67.0 140 36.4
A09p21160 Brassica napus HOM05D009819 ORTHO05D011938 3.9e-09 65.5 86 46.5
BraA09t37722Z Brassica rapa HOM05D009819 ORTHO05D011938 3.9e-09 65.5 86 46.5
A06p47110 Brassica napus HOM05D009819 ORTHO05D011938 6.6e-09 64.7 141 37.6
BraA06t27583Z Brassica rapa HOM05D009819 ORTHO05D011938 6.6e-09 64.7 141 37.6
BcaC04g21826 Brassica carinata HOM05D009819 ORTHO05D011938 7.3e-08 61.2 88 46.6
C09p26990 Brassica napus HOM05D009819 ORTHO05D011938 7.3e-08 61.2 88 46.6
BolC9t55582H Brassica oleracea HOM05D009819 ORTHO05D011938 7.3e-08 61.2 88 46.6
THA.LOC104812932 Tarenaya hassleriana HOM05D009819 ORTHO05D011938 7.3e-08 61.2 144 40.3
THA.LOC104806242 Tarenaya hassleriana HOM05D009819 ORTHO05D011938 2.8e-07 59.3 115 43.5
BcaB07g30942 Brassica carinata HOM05D009819 ORTHO05D011938 6.2e-07 58.2 86 46.5
BcaNung05679 Brassica carinata HOM05D010395 ORTHO05D012583 8.1e-07 57.8 50 68.0


User provided reference genes

Program Settings