Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G33090 Arabidopsis lyrata HOM05D012071 ORTHO05D013970 2.9e-34 148.3 91 100.0
CARHR227630 Cardamine hirsuta HOM05D012071 ORTHO05D013970 6.5e-18 94.0 49 93.9
AT4G21060 Arabidopsis thaliana HOM05D000777 ORTHO05D000595 3.2e-17 91.7 49 93.9
Carub.0007s2040 Capsella rubella HOM05D012071 ORTHO05D013970 4.2e-17 91.3 100 72.0
Sp7g19100 Schrenkiella parvula HOM05D012071 ORTHO05D013970 7.2e-17 90.5 95 74.7
A03p52620 Brassica napus HOM05D012071 ORTHO05D013970 9.3e-17 90.1 48 93.8
BraA03t14336Z Brassica rapa HOM05D012071 ORTHO05D013970 9.3e-17 90.1 48 93.8
A01p12410 Brassica napus HOM05D000777 ORTHO05D000595 1.6e-16 89.4 49 89.8
C01p14990 Brassica napus HOM05D012071 ORTHO05D013970 1.6e-16 89.4 49 89.8
C07p51060 Brassica napus HOM05D012071 ORTHO05D013970 1.6e-16 89.4 80 81.2
BraA01t01187Z Brassica rapa HOM05D000777 ORTHO05D000595 1.6e-16 89.4 49 89.8
BcaNung04703 Brassica carinata HOM05D012071 ORTHO05D013970 7.9e-16 87.0 48 89.6
BolC7t45606H Brassica oleracea HOM05D012071 ORTHO05D013970 1.0e-15 86.7 80 78.8
BcaC09g51267 Brassica carinata HOM05D012071 ORTHO05D013970 2.3e-15 85.5 46 91.3
BolC1t01447H Brassica oleracea HOM05D000777 ORTHO05D000595 2.3e-15 85.5 46 91.3
Thhalv10026664m.g Eutrema salsugineum HOM05D012071 ORTHO05D013970 1.7e-13 79.3 96 68.8
Aa31LG6G3080 Aethionema arabicum HOM05D012071 ORTHO05D013970 1.1e-12 76.6 43 95.3
A08p15420 Brassica napus HOM05D012071 ORTHO05D013970 2.9e-10 68.6 45 77.8
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 4.7e-08 61.2 93 47.3
BcaB03g11702 Brassica carinata HOM05D012071 ORTHO05D013970 7.9e-08 60.5 48 68.8
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 7.9e-08 60.5 90 46.7
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 2.3e-07 58.9 98 46.9
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 3.9e-07 58.2 90 43.3
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 8.8e-07 57.0 90 45.6
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 1.5e-06 56.2 41 73.2
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 1.5e-06 56.2 90 45.6
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 1.5e-06 56.2 90 45.6
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 1.5e-06 56.2 90 45.6
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 2.0e-06 55.8 98 48.0
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 2.6e-06 55.5 96 44.8
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 3.3e-06 55.1 90 44.4
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 4.4e-06 54.7 41 70.7
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 5.7e-06 54.3 41 68.3
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 7.4e-06 53.9 90 43.3
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 9.7e-06 53.5 98 45.9
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 9.7e-06 53.5 98 45.9
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 9.7e-06 53.5 98 45.9
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 9.7e-06 53.5 47 66.0


User provided reference genes

Program Settings