Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G32900 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 8.7e-224 780.0 404 100.0
AT4G21210 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 6.3e-214 747.3 404 95.3
Carub.0007s2021 Capsella rubella HOM05D004835 ORTHO05D006046 1.1e-205 719.9 404 92.6
Thhalv10025354m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 4.8e-198 694.5 406 89.4
CARHR227800 Cardamine hirsuta HOM05D004835 ORTHO05D006046 1.1e-197 693.3 404 89.6
Sp7g19300 Schrenkiella parvula HOM05D004835 ORTHO05D006046 5.9e-196 687.6 404 89.6
BcaNung03833 Brassica carinata HOM05D004835 ORTHO05D006046 7.4e-191 670.6 404 87.9
A01p12580 Brassica napus HOM05D004835 ORTHO05D006046 1.1e-189 666.8 404 86.6
BraA01t01201Z Brassica rapa HOM05D004835 ORTHO05D006046 2.0e-188 662.5 404 86.1
BolC1t01464H Brassica oleracea HOM05D004835 ORTHO05D006046 7.7e-188 660.6 404 86.4
C01p15150 Brassica napus HOM05D004835 ORTHO05D006046 2.9e-187 658.7 404 86.4
BcaC09g51244 Brassica carinata HOM05D004835 ORTHO05D006046 1.5e-186 656.4 404 86.1
Aa31LG6G3230 Aethionema arabicum HOM05D004835 ORTHO05D006046 4.1e-181 638.3 409 84.1
THA.LOC104812524 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 4.1e-157 558.5 407 72.7
Atru.chr10.2145 Acer truncatum HOM05D004835 ORTHO05D006046 6.6e-131 471.5 375 65.6
CiPaw.10G068200 Carya illinoinensis HOM05D004835 ORTHO05D006046 4.3e-130 468.8 395 64.8
TAR626G1121 Trochodendron aralioides HOM05D004835 ORTHO05D006046 5.6e-130 468.4 393 64.1
Gohir.A06G145700 Gossypium hirsutum HOM05D004835 ORTHO05D006046 3.6e-129 465.7 396 63.1
Thecc.06G213800 Theobroma cacao HOM05D004835 ORTHO05D006046 4.7e-129 465.3 382 64.1
Gorai.010G176900 Gossypium raimondii HOM05D004835 ORTHO05D006046 8.1e-129 464.5 396 62.9
Lj1A1224G37 Lonicera japonica HOM05D004835 ORTHO05D006046 1.4e-128 463.8 405 62.0
QL05p075217 Quercus lobata HOM05D004835 ORTHO05D006046 1.4e-128 463.8 398 61.3
Hma1.2p1_0091F.1_g046150 Hydrangea macrophylla HOM05D004835 ORTHO05D006046 1.8e-128 463.4 401 63.1
Sabra04G0012600 Salix brachista HOM05D004835 ORTHO05D006046 2.4e-128 463.0 394 62.2
vmacro03709 Vaccinium macrocarpon HOM05D004835 ORTHO05D006046 1.2e-127 460.7 399 61.4
MD05G1340900 Malus domestica HOM05D004835 ORTHO05D006046 2.0e-127 459.9 396 61.9
Actinidia26949 Actinidia chinensis HOM05D004835 ORTHO05D006046 3.4e-127 459.1 403 61.3
Prupe.4G026400 Prunus persica HOM05D004835 ORTHO05D006046 4.4e-127 458.8 403 61.5
PGR004G0955 Punica granatum HOM05D004835 ORTHO05D006046 4.4e-127 458.8 412 59.7
Potri.004G022900 Populus trichocarpa HOM05D004835 ORTHO05D006046 7.6e-127 458.0 396 62.1
arahy.Tifrunner.gnm1.ann1.06HJR7 Arachis hypogaea HOM05D004835 ORTHO05D006046 9.9e-127 457.6 373 62.7
FvH4_3g02680 Fragaria vesca HOM05D004835 ORTHO05D006046 1.7e-126 456.8 370 64.9
FAN25G1333 Fragaria x ananassa HOM05D004835 ORTHO05D006046 1.7e-126 456.8 370 64.9
Cpa.g.sc198.3 Carica papaya HOM05D004835 ORTHO05D006046 4.9e-126 455.3 397 60.7
Nn1g07024 Nelumbo nucifera HOM05D004835 ORTHO05D006046 1.4e-125 453.8 374 62.3
arahy.Tifrunner.gnm1.ann1.P6UBAG Arachis hypogaea HOM05D004835 ORTHO05D006046 1.9e-125 453.4 373 62.5
RcHm_v2.0_Chr5g0004011 Rosa chinensis HOM05D004835 ORTHO05D006046 2.4e-125 453.0 369 65.0
Glyma.10G252300 Glycine max HOM05D004835 ORTHO05D006046 5.4e-125 451.8 359 64.3
Glyma.20G141100 Glycine max HOM05D004835 ORTHO05D006046 1.2e-124 450.7 359 64.1
MBI02_g10099_MAGBIO Magnolia biondii HOM05D004835 ORTHO05D006046 1.6e-124 450.3 379 63.9
Cfa000278 Carpinus fangiana HOM05D004835 ORTHO05D006046 2.1e-124 449.9 402 60.2
COL.COLO4_31722 Corchorus olitorius HOM05D004835 ORTHO05D006046 2.1e-124 449.9 392 61.7
Oeu030985.2 Olea europaea HOM05D004835 ORTHO05D006046 2.1e-124 449.9 423 59.3
ClCG03G004990 Citrullus lanatus HOM05D004835 ORTHO05D006046 2.7e-124 449.5 389 60.7
Lj5g0006944 Lotus japonicus HOM05D004835 ORTHO05D006046 2.7e-124 449.5 368 62.0
CSS0008490 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 3.5e-124 449.1 391 61.4
Rhsim13G0157800 Rhododendron simsii HOM05D004835 ORTHO05D006046 4.6e-124 448.7 391 60.9
Lalb_Chr02g0144591 Lupinus albus HOM05D004835 ORTHO05D006046 7.8e-124 448.0 368 63.0
Manes.16G012700 Manihot esculenta HOM05D004835 ORTHO05D006046 7.8e-124 448.0 365 63.6
Phvul.007G051900 Phaseolus vulgaris HOM05D004835 ORTHO05D006046 1.7e-123 446.8 359 64.1
Eucgr.D00815 Eucalyptus grandis HOM05D004835 ORTHO05D006046 3.0e-123 446.0 395 60.8
DCAR_008123 Daucus carota HOM05D004835 ORTHO05D006046 3.9e-123 445.7 356 64.0
Ciclev10015558m.g Citrus clementina HOM05D004835 ORTHO05D006046 6.6e-123 444.9 396 61.4
CsaV3_1G011070 Cucumis sativus L. HOM05D004835 ORTHO05D006046 1.9e-122 443.4 391 61.1
Haze_06733 Corylus avellana HOM05D004835 ORTHO05D006046 2.5e-122 443.0 376 62.2
Solyc10g005370.3 Solanum lycopersicum HOM05D004835 ORTHO05D006046 3.3e-122 442.6 403 60.0
Sopen10g001360 Solanum pennellii HOM05D004835 ORTHO05D006046 3.3e-122 442.6 403 60.0
Haze_06737 Corylus avellana HOM05D004835 ORTHO05D006046 9.6e-122 441.0 419 57.8
MELO3C002484.2 Cucumis melo HOM05D004835 ORTHO05D006046 9.6e-122 441.0 398 59.5
PGSC0003DMG400011280 Solanum tuberosum HOM05D004835 ORTHO05D006046 9.6e-122 441.0 373 61.9
VMungo0720G3178 Vigna mungo HOM05D004835 ORTHO05D006046 2.1e-121 439.9 358 62.8
Ca_10985_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 3.6e-121 439.1 387 59.4
Ca_11005_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 3.6e-121 439.1 387 59.4
Hund21377 Selenicereus undatus HOM05D004835 ORTHO05D006046 6.2e-121 438.3 360 63.3
Nitab4.5_0003738g0050 Nicotiana tabacum HOM05D004835 ORTHO05D006046 1.4e-120 437.2 392 60.2
Gohir.D06G151600 Gossypium hirsutum HOM05D004835 ORTHO05D006046 1.8e-120 436.8 396 60.6
TWI63G0472 Tripterygium wilfordii HOM05D004835 ORTHO05D006046 1.8e-120 436.8 371 61.5
Nitab4.5_0006795g0010 Nicotiana tabacum HOM05D004835 ORTHO05D006046 5.3e-120 435.3 392 59.9
Aqoxy4G01996 Aquilegia oxysepala HOM05D004835 ORTHO05D006046 1.2e-119 434.1 368 62.8
Medtr1g105545 Medicago truncatula HOM05D004835 ORTHO05D006046 1.2e-119 434.1 384 60.4
AUR62022016 Chenopodium quinoa HOM05D004835 ORTHO05D006046 1.5e-119 433.7 372 61.0
Lsat_1_v5_gn_7_16981 Lactuca sativa HOM05D004835 ORTHO05D006046 2.0e-119 433.3 407 59.0
PSO675G0743 Papaver somniferum HOM05D004835 ORTHO05D006046 2.0e-119 433.3 402 58.0
ECA236G4143 Erigeron canadensis HOM05D004835 ORTHO05D006046 3.4e-119 432.6 402 59.7
ATR0762G046 Amborella trichopoda HOM05D004835 ORTHO05D006046 7.6e-119 431.4 369 61.0
CANSAT56G3094 Cannabis sativa HOM05D004835 ORTHO05D006046 7.6e-119 431.4 408 58.3
Psat6g210360 Pisum sativum HOM05D004835 ORTHO05D006046 1.7e-118 430.3 392 59.2
Sed0001374 Sechium edule HOM05D004835 ORTHO05D006046 4.9e-118 428.7 425 55.3
SGA_v2.0_scaffold49G18268 Striga asiatica HOM05D004835 ORTHO05D006046 4.9e-118 428.7 348 63.5
EL10Ac8g19899 Beta vulgaris HOM05D004835 ORTHO05D006046 6.4e-118 428.3 387 57.4
HanXRQChr05g0130051 Helianthus annuus HOM05D004835 ORTHO05D006046 6.4e-118 428.3 407 57.5
THA.LOC104821035 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 1.4e-117 427.2 401 57.4
CAN.G105.1 Capsicum annuum HOM05D004835 ORTHO05D006046 2.4e-117 426.4 385 59.7
Ah.09g235350 Amaranthus hybridus HOM05D004835 ORTHO05D006046 3.2e-117 426.0 393 57.3
Dinv17835 Davidia involucrata HOM05D004835 ORTHO05D006046 1.2e-116 424.1 287 73.2
GSVIVG01012626001 Vitis vinifera HOM05D004835 ORTHO05D006046 2.1e-116 423.3 287 72.1
Sc05g0008870 Simmondsia chinensis HOM05D004835 ORTHO05D006046 1.3e-115 420.6 363 60.1
Duzib235G1297 Durio zibethinus HOM05D004835 ORTHO05D006046 5.1e-115 418.7 383 59.8
MSTRG.13160 Avicennia marina HOM05D004835 ORTHO05D006046 1.9e-114 416.8 412 55.8
Cc00_g17920 Coffea canephora HOM05D004835 ORTHO05D006046 2.5e-114 416.4 287 71.4
CDE05G0674 Ceratophyllum demersum HOM05D004835 ORTHO05D006046 5.6e-114 415.2 384 57.3
Thhalv10020923m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 9.6e-114 414.5 394 58.1
Migut.H01551 Erythranthe guttata HOM05D004835 ORTHO05D006046 1.6e-113 413.7 403 58.3
Sp3g00900 Schrenkiella parvula HOM05D004835 ORTHO05D006046 2.1e-113 413.3 387 57.1
Os07g0530600 Oryza sativa ssp. japonica HOM05D004835 ORTHO05D006046 3.1e-112 409.5 360 60.8
PSO541G2305 Papaver somniferum HOM05D004835 ORTHO05D006046 1.2e-111 407.5 402 56.2
MSTRG.14649 Avicennia marina HOM05D004835 ORTHO05D006046 4.5e-111 405.6 413 54.5
Zm00001eb323140 Zea mays HOM05D004835 ORTHO05D006046 7.6e-111 404.8 405 54.3
HPP92_010092 Vanilla planifolia HOM05D004835 ORTHO05D006046 2.2e-110 403.3 375 57.6
AT3G01200 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 6.4e-110 401.7 392 55.9
SalBow1G4699 Salvia bowleyana HOM05D004835 ORTHO05D006046 8.4e-110 401.4 345 60.6
BcaC05g30485 Brassica carinata HOM05D004835 ORTHO05D006046 5.5e-109 398.7 390 57.7
Zm00001eb106240 Zea mays HOM05D004835 ORTHO05D006046 1.2e-108 397.5 395 54.7
C09p75340 Brassica napus HOM05D004835 ORTHO05D006046 1.6e-108 397.1 371 59.3
BolC5t35125H Brassica oleracea HOM05D004835 ORTHO05D006046 1.6e-108 397.1 371 59.3
Carub.0003s0094 Capsella rubella HOM05D004835 ORTHO05D006046 1.6e-108 397.1 376 57.4
AL3G11040 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 2.7e-108 396.4 388 57.0
CARHR075840 Cardamine hirsuta HOM05D004835 ORTHO05D006046 4.6e-108 395.6 357 58.8
ECA248G0073 Erigeron canadensis HOM05D004835 ORTHO05D006046 1.0e-107 394.4 373 57.6
A05p44760 Brassica napus HOM05D004835 ORTHO05D006046 1.8e-107 393.7 371 58.8
BraA05t23181Z Brassica rapa HOM05D004835 ORTHO05D006046 1.8e-107 393.7 371 58.8
unitig_26.g9396 Utricularia gibba HOM05D004835 ORTHO05D006046 1.8e-107 393.7 391 55.2
BcaC05g30395 Brassica carinata HOM05D004835 ORTHO05D006046 3.0e-107 392.9 371 58.8
Lsat_1_v5_gn_1_125320 Lactuca sativa HOM05D004835 ORTHO05D006046 6.7e-107 391.7 393 56.7
unitig_749.g13624 Utricularia gibba HOM05D004835 ORTHO05D006046 1.1e-106 391.0 360 56.7
BraA01t04644Z Brassica rapa HOM05D004835 ORTHO05D006046 2.1e-105 386.7 379 56.7
BNapus_Darmor_BZH_scaffold_113p00010 Brassica napus HOM05D004835 ORTHO05D006046 3.7e-105 386.0 379 56.5
BNapus_Darmor_BZH_scaffold_97p00190 Brassica napus HOM05D004835 ORTHO05D006046 4.8e-105 385.6 381 57.2
Cpa.g.sc198.4 Carica papaya HOM05D004835 ORTHO05D006046 4.8e-105 385.6 286 67.8
BolC1t05939H Brassica oleracea HOM05D004835 ORTHO05D006046 1.1e-104 384.4 376 56.6
Nn1g03640 Nelumbo nucifera HOM05D004835 ORTHO05D006046 1.4e-104 384.0 365 58.1
HanXRQChr01g0002521 Helianthus annuus HOM05D004835 ORTHO05D006046 6.9e-104 381.7 359 56.8
BcaC09g47670 Brassica carinata HOM05D004835 ORTHO05D006046 4.5e-103 379.0 369 56.6
Peaxi162Scf00678g00310 Petunia axillaris HOM05D004835 ORTHO05D006046 7.6e-103 378.3 382 55.5
Pp3c11_19190 Physcomitrium patens HOM05D004835 ORTHO05D006046 7.6e-103 378.3 365 53.4
BcaB04g21426 Brassica carinata HOM05D004835 ORTHO05D006046 6.5e-102 375.2 373 56.0
Hund23515 Selenicereus undatus HOM05D004835 ORTHO05D006046 8.4e-102 374.8 371 56.1
SMO147G0180 Selaginella moellendorffii HOM05D004835 ORTHO05D006046 4.2e-101 372.5 290 60.7
Mapoly0141s0024 Marchantia polymorpha HOM05D004835 ORTHO05D006046 1.6e-100 370.5 365 53.2
SEGI_26962 Sequoiadendron giganteum HOM05D004835 ORTHO05D006046 8.7e-99 364.8 323 58.2
Lj2A274G58 Lonicera japonica HOM05D004835 ORTHO05D006046 2.5e-98 363.2 372 55.6
CSS0001434 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 3.0e-91 339.7 288 62.2
FAN21G1397 Fragaria x ananassa HOM05D004835 ORTHO05D006046 3.0e-91 339.7 285 62.5
CBR_g38977 Chara braunii HOM05D004835 ORTHO05D006046 3.7e-89 332.8 416 46.6
TPR.G5518 Trifolium pratense HOM05D004835 ORTHO05D006046 5.3e-88 328.9 373 49.1
Aa31LG5G12420 Aethionema arabicum HOM05D004835 ORTHO05D006046 4.2e-85 319.3 251 64.9
AagrBONN_evm.TU.Sc2ySwM_368.2632 Anthoceros agrestis HOM05D004835 ORTHO05D006046 2.7e-84 316.6 370 47.3
HPP92_010083 Vanilla planifolia HOM05D004835 ORTHO05D006046 5.1e-83 312.4 247 62.8
Dinv20014 Davidia involucrata HOM05D004835 ORTHO05D006046 1.4e-67 261.2 212 63.2
MCO14G521 Micromonas commoda HOM05D004835 ORTHO05D006046 3.4e-58 229.9 295 42.7
Cre12.g514600 Chlamydomonas reinhardtii HOM05D004835 ORTHO05D006046 5.7e-58 229.2 296 40.5
BolC1t05935H Brassica oleracea HOM05D004835 ORTHO05D006046 9.5e-53 211.8 171 63.7
BNapus_Darmor_BZH_scaffold_97p00140 Brassica napus HOM05D004835 ORTHO05D006046 2.8e-52 210.3 155 66.5
TPR.G4570 Trifolium pratense HOM05D004835 ORTHO05D006046 1.7e-41 174.5 256 41.4
MD10G1314400 Malus domestica HOM05D004835 ORTHO05D006046 1.9e-29 134.4 246 36.6
BolC1t05929H Brassica oleracea HOM05D004835 ORTHO05D006046 1.1e-24 118.6 189 39.2
CANSAT64G1413 Cannabis sativa HOM05D004835 ORTHO05D006046 1.6e-23 114.8 174 41.4
Actinidia05534 Actinidia chinensis HOM05D000018 ORTHO05D001766 2.8e-20 104.0 110 52.7
Ca_29404_v3 Cicer arietinum L. HOM05D004835 ORTHO05D148401 1.4e-19 101.7 281 27.8
Aa31LG5G12410 Aethionema arabicum HOM05D004835 ORTHO05D038187 2.2e-17 94.4 144 44.4
BolC5t35131H Brassica oleracea HOM05D004835 ORTHO05D038187 2.1e-15 87.8 53 77.4
Dinv20013 Davidia involucrata HOM05D004835 ORTHO05D006046 2.1e-15 87.8 72 59.7
QL10p027838 Quercus lobata HOM05D004835 ORTHO05D337120 8.4e-09 65.9 144 34.7


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