Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 5.5e-56 220.7 109 100.0
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 2.3e-54 215.3 109 97.2
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 1.1e-53 213.0 109 96.3
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 2.0e-53 212.2 109 95.4
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 1.2e-50 203.0 108 95.4
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 1.0e-49 199.9 109 92.7
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 1.0e-49 199.9 109 92.7
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 1.0e-49 199.9 109 92.7
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 1.0e-49 199.9 109 92.7
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 1.3e-49 199.5 107 91.6
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 3.8e-49 198.0 107 91.6
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 3.8e-49 198.0 107 90.7
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 8.5e-49 196.8 109 91.7
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 8.5e-49 196.8 109 91.7
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 1.1e-48 196.4 109 90.8
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 4.2e-48 194.5 111 88.3
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 4.2e-48 194.5 111 88.3
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 1.2e-47 193.0 109 90.8
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 4.8e-44 181.0 108 81.5
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 6.5e-41 170.6 107 79.4
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 6.7e-38 160.6 90 83.3
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 6.7e-38 160.6 90 83.3
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 2.0e-37 159.1 108 71.3
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 2.6e-37 158.7 101 79.2
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 2.6e-37 158.7 104 76.0
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 3.3e-37 158.3 90 82.2
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 4.4e-37 157.9 93 80.6
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 7.5e-37 157.1 97 75.3
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 7.5e-37 157.1 93 78.5
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 7.5e-37 157.1 108 71.3
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 9.7e-37 156.8 93 78.5
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 9.7e-37 156.8 107 71.0
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 1.7e-36 156.0 109 70.6
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 1.7e-36 156.0 90 82.2
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 1.7e-36 156.0 97 78.4
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 2.2e-36 155.6 90 82.2
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 2.2e-36 155.6 93 78.5
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 6.3e-36 154.1 94 77.7
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 8.2e-36 153.7 108 72.2
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 8.2e-36 153.7 102 75.5
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 1.1e-35 153.3 98 72.4
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 1.4e-35 152.9 107 70.1
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.4e-35 152.9 96 79.2
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.4e-35 152.9 96 79.2
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 1.8e-35 152.5 93 79.6
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 2.4e-35 152.1 83 85.5
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 2.4e-35 152.1 100 72.0
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 2.4e-35 152.1 98 74.5
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 2.4e-35 152.1 86 82.6
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 2.4e-35 152.1 86 81.4
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 3.1e-35 151.8 100 75.0
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 3.1e-35 151.8 94 77.7
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 4.1e-35 151.4 105 70.5
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 4.1e-35 151.4 88 83.0
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 4.1e-35 151.4 88 80.7
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 4.1e-35 151.4 94 75.5
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 4.1e-35 151.4 95 75.8
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 4.1e-35 151.4 93 77.4
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 7.0e-35 150.6 101 70.3
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 9.1e-35 150.2 101 70.3
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 9.1e-35 150.2 100 75.0
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 9.1e-35 150.2 83 83.1
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 1.2e-34 149.8 105 71.4
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.6e-34 149.4 103 71.8
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 2.7e-34 148.7 87 80.5
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 3.5e-34 148.3 108 70.4
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 5.9e-34 147.5 99 69.7
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 5.9e-34 147.5 99 69.7
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 7.7e-34 147.1 105 71.4
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 7.7e-34 147.1 98 72.4
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 7.7e-34 147.1 98 72.4
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 7.7e-34 147.1 104 67.3
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 7.7e-34 147.1 88 80.7
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 1.3e-33 146.4 108 68.5
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 2.2e-33 145.6 98 71.4
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 3.8e-33 144.8 81 81.5
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 6.5e-33 144.1 85 77.6
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 8.5e-33 143.7 94 74.5
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 1.1e-32 143.3 102 71.6
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 1.1e-32 143.3 100 69.0
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 1.5e-32 142.9 99 65.7
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 1.9e-32 142.5 83 80.7
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 1.9e-32 142.5 82 80.5
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 2.5e-32 142.1 99 65.7
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 3.2e-32 141.7 81 81.5
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 4.2e-32 141.4 104 70.2
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 5.5e-32 141.0 88 73.9
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 1.2e-31 139.8 101 70.3
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 1.6e-31 139.4 102 65.7
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 1.4e-30 136.3 80 78.8
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.2e-29 133.3 103 67.0
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 9.8e-29 130.2 71 81.7
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 1.2e-26 123.2 80 71.2
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 2.0e-26 122.5 97 63.9
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 1.0e-25 120.2 68 77.9
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 6.5e-25 117.5 76 69.7
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 1.5e-24 116.3 83 71.1
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 2.1e-23 112.5 91 64.8
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 1.4e-22 109.8 105 58.1
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 1.4e-22 109.8 76 67.1
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 3.4e-21 105.1 79 63.3
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 1.1e-19 100.1 115 52.2
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 5.4e-19 97.8 56 82.1
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 1.5e-16 89.7 55 85.5
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 1.0e-14 83.6 69 68.1
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 2.2e-12 75.9 56 67.9


User provided reference genes

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